RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 KANTRA0A1W2PQU2 76 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 GDF1P27539 372 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 CTRLP40313 264 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 FHL3Q13643 280 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 ACTL10Q5JWF8 245 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 AVPI1Q5T686 147 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 SVBPQ8N300 66 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 A0A087X0M5 115 aa4.42□□□□□ -1.7
CD47-201ENST00000355354 A0A1B0GX30 115 aa4.42□□□□□ -1.7
CD47-201ENST00000355354 ARL14EPLP0DKL9 152 aa4.42□□□□□ -1.7
CD47-201ENST00000355354 ZNF83P51522 516 aa4.42□□□□□ -1.7
CD47-201ENST00000355354 ZADH2Q8N4Q0 377 aa4.42□□□□□ -1.7
CD47-201ENST00000355354 LRTM2Q8N967 370 aa4.42□□□□□ -1.7
CD47-201ENST00000355354 INO80EQ8NBZ0 244 aaPredicted RBP4.42□□□□□ -1.7
CD47-201ENST00000355354 CABLES2Q9BTV7 478 aa4.42□□□□□ -1.7
CD47-201ENST00000355354 ZNF355PQ9NSJ1 428 aa4.42□□□□□ -1.7
CD47-201ENST00000355354 TMEM160Q9NX00 188 aa4.42□□□□□ -1.7
CD47-201ENST00000355354 FNDC10F2Z333 226 aa4.42□□□□□ -1.7
CD47-201ENST00000355354 PRAF2O60831 178 aa4.42□□□□□ -1.7
CD47-201ENST00000355354 MT-ATP6P00846 226 aa4.42□□□□□ -1.7
CD47-201ENST00000355354 IL6RP08887 468 aaPredicted RBP4.42□□□□□ -1.7
CD47-201ENST00000355354 CRYBB3P26998 211 aa4.42□□□□□ -1.7
CD47-201ENST00000355354 CDX1P47902 265 aaPredicted RBP4.42□□□□□ -1.7
CD47-201ENST00000355354 SPCS3P61009 180 aa4.42□□□□□ -1.7
CD47-201ENST00000355354 ZNF124Q15973 351 aa4.42□□□□□ -1.7
CD47-201ENST00000355354 GABRA6Q16445 453 aa4.42□□□□□ -1.7
CD47-201ENST00000355354 TMEM190Q8WZ59 177 aa4.42□□□□□ -1.7
CD47-201ENST00000355354 WDR61Q9GZS3 305 aaKnown RBP4.42□□□□□ -1.7
CD47-201ENST00000355354 GNB4Q9HAV0 340 aa4.42□□□□□ -1.7
CD47-201ENST00000355354 MARCH11A6NNE9 402 aa4.42□□□□□ -1.7
CD47-201ENST00000355354 AP4M1O00189 453 aa4.42□□□□□ -1.7
CD47-201ENST00000355354 TSPAN15O95858 294 aa4.42□□□□□ -1.7
CD47-201ENST00000355354 CTSDP07339 412 aaPredicted RBP4.42□□□□□ -1.7
CD47-201ENST00000355354 DPPA3Q6W0C5 159 aa4.42□□□□□ -1.7
CD47-201ENST00000355354 ZNF66Q6ZN08 573 aa4.42□□□□□ -1.7
CD47-201ENST00000355354 FAM220AQ7Z4H9 259 aa4.42□□□□□ -1.7
CD47-201ENST00000355354 GJC3Q8NFK1 279 aa4.42□□□□□ -1.7
CD47-201ENST00000355354 DDB2Q92466 427 aa4.42□□□□□ -1.7
CD47-201ENST00000355354 IGHV1-18A0A0C4DH31 117 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 SMPD2O60906 423 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 ZFAND5O76080 213 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 AGR2O95994 175 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 MAS1LP35410 378 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 VDAC2P45880 294 aaPredicted RBP4.41□□□□□ -1.7
CD47-201ENST00000355354 ACSF3Q4G176 576 aaPredicted RBP4.41□□□□□ -1.7
CD47-201ENST00000355354 TM4SF20Q53R12 229 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 DEGS2Q6QHC5 323 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 H1FOOQ8IZA3 346 aaPredicted RBP4.41□□□□□ -1.7
CD47-201ENST00000355354 PRR7Q8TB68 274 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 STARD4Q96DR4 205 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 HIPK2Q9H2X6 1198 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 RNF213Q63HN8 5207 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 A1L4Q6 167 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 PRAC2D3DTV9 90 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 CHRM2P08172 466 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 DDTP30046 118 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 ADIRFQ15847 76 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 FFAR4Q5NUL3 377 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 MRPL54Q6P161 138 aaKnown RBP4.41□□□□□ -1.7
CD47-201ENST00000355354 ZNF497Q6ZNH5 498 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 SLC25A31Q9H0C2 315 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 SLCO5A1Q9H2Y9 848 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 HES4Q9HCC6 221 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 FLG2Q5D862 2391 aaPredicted RBP4.41□□□□□ -1.7
CD47-201ENST00000355354 MT-ND4LP03901 98 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 IGLL1P15814 213 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 BTF3P20290 206 aaKnown RBP4.41□□□□□ -1.7
CD47-201ENST00000355354 RSU1Q15404 277 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 OR1C1Q15619 314 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 ST8SIA1Q92185 356 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 CCL13Q99616 98 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 PRRT1Q99946 306 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 GPN1Q9HCN4 374 aaPredicted RBP4.41□□□□□ -1.7
CD47-201ENST00000355354 PARP11Q9NR21 331 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 HSPG2P98160 4391 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 TRDCB7Z8K6 153 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 TPT1P13693 172 aaKnown RBP4.41□□□□□ -1.7
CD47-201ENST00000355354 CHRNB4P30926 498 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 DUTP33316 252 aaKnown RBP4.41□□□□□ -1.7
CD47-201ENST00000355354 KLRD1Q13241 179 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 HLA-DQA1Q5Y7H0 255 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 MRPL37Q9BZE1 423 aaKnown RBP4.41□□□□□ -1.7
CD47-201ENST00000355354 PFDN2Q9UHV9 154 aa4.41□□□□□ -1.7
CD47-201ENST00000355354 LOC102723971A0A1B0GUV8 181 aa4.4□□□□□ -1.7
CD47-201ENST00000355354 C2orf70A6NJV1 201 aa4.4□□□□□ -1.7
CD47-201ENST00000355354 FGF12P61328 243 aa4.4□□□□□ -1.7
CD47-201ENST00000355354 PMS2P11Q13670 270 aa4.4□□□□□ -1.7
CD47-201ENST00000355354 RPL13AP3Q6NVV1 102 aa4.4□□□□□ -1.7
CD47-201ENST00000355354 FAM210BQ96KR6 192 aa4.4□□□□□ -1.7
CD47-201ENST00000355354 PACRGQ96M98 296 aaPredicted RBP4.4□□□□□ -1.7
CD47-201ENST00000355354 C1RLQ9NZP8 487 aa4.4□□□□□ -1.7
CD47-201ENST00000355354 TMEM14AQ9Y6G1 99 aa4.4□□□□□ -1.7
CD47-201ENST00000355354 DPRXA6NFQ7 191 aa4.4□□□□□ -1.7
CD47-201ENST00000355354 ZNF705GA8MUZ8 300 aaPredicted RBP4.4□□□□□ -1.7
CD47-201ENST00000355354 GABRA2P47869 451 aa4.4□□□□□ -1.7
CD47-201ENST00000355354 TAS2R30P59541 319 aa4.4□□□□□ -1.7
CD47-201ENST00000355354 EFNB3Q15768 340 aa4.4□□□□□ -1.7
CD47-201ENST00000355354 FAM78BQ5VT40 261 aa4.4□□□□□ -1.7
CD47-201ENST00000355354 SPAG16Q8N0X2 631 aa4.4□□□□□ -1.7
CD47-201ENST00000355354 CNEP1R1Q8N9A8 125 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms