RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 TXNDC17Q9BRA2 123 aa13.59□□□□□ -0.23
RDX-201ENST00000343115 MRPL20Q9BYC9 149 aaKnown RBP13.59□□□□□ -0.23
RDX-201ENST00000343115 SLC31A2O15432 143 aa13.59□□□□□ -0.23
RDX-201ENST00000343115 BRS3P32247 399 aa13.59□□□□□ -0.23
RDX-201ENST00000343115 CD81P60033 236 aa13.59□□□□□ -0.23
RDX-201ENST00000343115 C10orf91Q5T1B1 145 aa13.59□□□□□ -0.23
RDX-201ENST00000343115 SPATA31B1PQ5VZV4 182 aa13.59□□□□□ -0.23
RDX-201ENST00000343115 LHFPL4Q7Z7J7 247 aa13.59□□□□□ -0.23
RDX-201ENST00000343115 C1orf162Q8NEQ5 155 aaPredicted RBP13.59□□□□□ -0.23
RDX-201ENST00000343115 OCC1Q8TAD7 63 aa13.59□□□□□ -0.23
RDX-201ENST00000343115 PERPQ96FX8 193 aa13.59□□□□□ -0.23
RDX-201ENST00000343115 HIST1H2BLQ99880 126 aa13.59□□□□□ -0.23
RDX-201ENST00000343115 TREML4Q6UXN2 200 aa13.59□□□□□ -0.23
RDX-201ENST00000343115 ACACBO00763 2458 aa13.59□□□□□ -0.23
RDX-201ENST00000343115 TMEM131Q92545 1883 aa13.59□□□□□ -0.23
RDX-201ENST00000343115 NDUFA2O43678 99 aa13.58□□□□□ -0.23
RDX-201ENST00000343115 HIST3H2BBQ8N257 126 aa13.58□□□□□ -0.23
RDX-201ENST00000343115 OR10W1Q8NGF6 305 aa13.58□□□□□ -0.23
RDX-201ENST00000343115 OR9G1Q8NH87 305 aa13.58□□□□□ -0.23
RDX-201ENST00000343115 ADAMTS9Q9P2N4 1935 aa13.58□□□□□ -0.23
RDX-201ENST00000343115 GNG7O60262 68 aa13.58□□□□□ -0.24
RDX-201ENST00000343115 HYPMO75409 117 aa13.58□□□□□ -0.24
RDX-201ENST00000343115 RNF2Q99496 336 aa13.58□□□□□ -0.24
RDX-201ENST00000343115 RNASE7Q9H1E1 156 aaKnown RBP13.58□□□□□ -0.24
RDX-201ENST00000343115 AAMDCQ9H7C9 122 aa13.58□□□□□ -0.24
RDX-201ENST00000343115 S4R3C0 116 aa13.58□□□□□ -0.24
RDX-201ENST00000343115 TRAV1-1A0A0B4J248 108 aa13.58□□□□□ -0.24
RDX-201ENST00000343115 IGHV3-35A0A0C4DH35 117 aa13.58□□□□□ -0.24
RDX-201ENST00000343115 DLL1O00548 723 aa13.58□□□□□ -0.24
RDX-201ENST00000343115 GCGP01275 180 aa13.58□□□□□ -0.24
RDX-201ENST00000343115 CLEC3BP05452 202 aa13.58□□□□□ -0.24
RDX-201ENST00000343115 C10orf55Q5SWW7 151 aa13.58□□□□□ -0.24
RDX-201ENST00000343115 SRRM5B3KS81 715 aa13.58□□□□□ -0.24
RDX-201ENST00000343115 CD33P20138 364 aa13.58□□□□□ -0.24
RDX-201ENST00000343115 VAMP3Q15836 100 aa13.58□□□□□ -0.24
RDX-201ENST00000343115 PRR31Q5SQ13 230 aa13.58□□□□□ -0.24
RDX-201ENST00000343115 PRNTQ86SH4 94 aa13.58□□□□□ -0.24
RDX-201ENST00000343115 OR4C13Q8NGP0 309 aa13.58□□□□□ -0.24
RDX-201ENST00000343115 WASHC3Q9Y3C0 194 aa13.58□□□□□ -0.24
RDX-201ENST00000343115 YPEL1O60688 119 aa13.57□□□□□ -0.24
RDX-201ENST00000343115 PRSS3P2Q8NHM4 247 aa13.57□□□□□ -0.24
RDX-201ENST00000343115 YPEL2Q96QA6 119 aa13.57□□□□□ -0.24
RDX-201ENST00000343115 ZNF430Q9H8G1 570 aaPredicted RBP13.57□□□□□ -0.24
RDX-201ENST00000343115 LPAR2Q9HBW0 351 aa13.57□□□□□ -0.24
RDX-201ENST00000343115 ZNRD1Q9P1U0 126 aa13.57□□□□□ -0.24
RDX-201ENST00000343115 EML5Q05BV3 1969 aa13.57□□□□□ -0.24
RDX-201ENST00000343115 TRBV6-6A0A0A6YYG2 114 aa13.57□□□□□ -0.24
RDX-201ENST00000343115 AARDQ4LEZ3 155 aa13.57□□□□□ -0.24
RDX-201ENST00000343115 ZNF785A8K8V0 405 aa13.57□□□□□ -0.24
RDX-201ENST00000343115 TCTAP57738 103 aa13.57□□□□□ -0.24
RDX-201ENST00000343115 FA2HQ7L5A8 372 aa13.57□□□□□ -0.24
RDX-201ENST00000343115 FAM90A1Q86YD7 464 aa13.57□□□□□ -0.24
RDX-201ENST00000343115 SEPSECSQ9HD40 501 aaKnown RBP13.57□□□□□ -0.24
RDX-201ENST00000343115 ARF6P62330 175 aa13.56□□□□□ -0.24
RDX-201ENST00000343115 BSPH1Q075Z2 132 aa13.56□□□□□ -0.24
RDX-201ENST00000343115 SAA1P0DJI8 122 aaPredicted RBP13.56□□□□□ -0.24
RDX-201ENST00000343115 ZNF726P1Q15940 193 aa13.56□□□□□ -0.24
RDX-201ENST00000343115 ATG101Q9BSB4 218 aa13.56□□□□□ -0.24
RDX-201ENST00000343115 GGTLC1Q9BX51 225 aa13.56□□□□□ -0.24
RDX-201ENST00000343115 A0A1B0GW64 132 aa13.56□□□□□ -0.24
RDX-201ENST00000343115 LYNX1G3V0Z9 82 aa13.56□□□□□ -0.24
RDX-201ENST00000343115 IGKV1D-33P01593 117 aa13.56□□□□□ -0.24
RDX-201ENST00000343115 IGKV1-33P01594 117 aa13.56□□□□□ -0.24
RDX-201ENST00000343115 LYNX1P0DP58 116 aa13.56□□□□□ -0.24
RDX-201ENST00000343115 HIST1H1EP10412 219 aaKnown RBP13.56□□□□□ -0.24
RDX-201ENST00000343115 SCGB2A2Q13296 93 aa13.56□□□□□ -0.24
RDX-201ENST00000343115 EFNB3Q15768 340 aa13.56□□□□□ -0.24
RDX-201ENST00000343115 RNF224P0DH78 156 aa13.56□□□□□ -0.24
RDX-201ENST00000343115 RPRMLQ8N4K4 120 aa13.56□□□□□ -0.24
RDX-201ENST00000343115 LINC01560Q8TB33 94 aa13.56□□□□□ -0.24
RDX-201ENST00000343115 RAB1CQ92928 201 aa13.56□□□□□ -0.24
RDX-201ENST00000343115 MBNL3Q9NUK0 354 aaKnown RBP13.56□□□□□ -0.24
RDX-201ENST00000343115 TRBV24-1A0A075B6N3 115 aa13.55□□□□□ -0.24
RDX-201ENST00000343115 IGKV1D-17A0A075B6S4 117 aa13.55□□□□□ -0.24
RDX-201ENST00000343115 CCL21O00585 134 aa13.55□□□□□ -0.24
RDX-201ENST00000343115 FOXA3P55318 350 aaPredicted RBP13.55□□□□□ -0.24
RDX-201ENST00000343115 MLANAQ16655 118 aa13.55□□□□□ -0.24
RDX-201ENST00000343115 HAPLN4Q86UW8 402 aa13.55□□□□□ -0.24
RDX-201ENST00000343115 ABHD17AQ96GS6 310 aa13.55□□□□□ -0.24
RDX-201ENST00000343115 TMUB1Q9BVT8 246 aa13.55□□□□□ -0.24
RDX-201ENST00000343115 SFXN3Q9BWM7 321 aa13.55□□□□□ -0.24
RDX-201ENST00000343115 IFI27L2Q9H2X8 130 aa13.55□□□□□ -0.24
RDX-201ENST00000343115 C15orf62A8K5M9 175 aa13.55□□□□□ -0.24
RDX-201ENST00000343115 CA1P00915 261 aaPredicted RBP13.55□□□□□ -0.24
RDX-201ENST00000343115 SMIM15Q7Z3B0 74 aa13.55□□□□□ -0.24
RDX-201ENST00000343115 WDR31Q8NA23 367 aa13.55□□□□□ -0.24
RDX-201ENST00000343115 C15orf61A6NNL5 157 aa13.54□□□□□ -0.24
RDX-201ENST00000343115 GFRA3O60609 400 aa13.54□□□□□ -0.24
RDX-201ENST00000343115 Q6ZR03 302 aa13.54□□□□□ -0.24
RDX-201ENST00000343115 RNF151Q2KHN1 245 aa13.54□□□□□ -0.24
RDX-201ENST00000343115 ATRXP46100 2492 aa13.54□□□□□ -0.24
RDX-201ENST00000343115 TRANK1O15050 2925 aa13.54□□□□□ -0.24
RDX-201ENST00000343115 AMBPP02760 352 aa13.54□□□□□ -0.24
RDX-201ENST00000343115 FAM19A2Q8N3H0 131 aa13.54□□□□□ -0.24
RDX-201ENST00000343115 EAF1Q96JC9 268 aaPredicted RBP13.54□□□□□ -0.24
RDX-201ENST00000343115 PYYP10082 97 aa13.54□□□□□ -0.24
RDX-201ENST00000343115 LCN2P80188 198 aa13.54□□□□□ -0.24
RDX-201ENST00000343115 OR8B3Q8NGG8 313 aa13.54□□□□□ -0.24
RDX-201ENST00000343115 OR8B2Q96RD0 313 aa13.54□□□□□ -0.24
RDX-201ENST00000343115 PPP1R14DQ9NXH3 145 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms