RNA–Protein interactions for RNA: ENST00000300227.12

CCDC178-201, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC178, Length 3,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-201ENST00000300227 I3L521 148 aa11.05□□□□□ -0.64
CCDC178-201ENST00000300227 AVPP01185 164 aa11.05□□□□□ -0.64
CCDC178-201ENST00000300227 RNASE2P10153 161 aaKnown RBP11.05□□□□□ -0.64
CCDC178-201ENST00000300227 AREGP15514 252 aa11.05□□□□□ -0.64
CCDC178-201ENST00000300227 S100A1P23297 94 aa11.05□□□□□ -0.64
CCDC178-201ENST00000300227 BTNL8Q6UX41 500 aa11.05□□□□□ -0.64
CCDC178-201ENST00000300227 FAM103A1Q9BTL3 118 aaKnown RBP11.05□□□□□ -0.64
CCDC178-201ENST00000300227 A0A096LNT2 108 aa11.05□□□□□ -0.64
CCDC178-201ENST00000300227 EIF3GO75821 320 aaKnown RBP eCLIP11.05□□□□□ -0.64
CCDC178-201ENST00000300227 IGHV3-48P01763 117 aa11.05□□□□□ -0.64
CCDC178-201ENST00000300227 COMPP49747 757 aaPredicted RBP11.05□□□□□ -0.64
CCDC178-201ENST00000300227 LINC01356Q8N9X3 169 aa11.05□□□□□ -0.64
CCDC178-201ENST00000300227 SAT2Q96F10 170 aaPredicted RBP11.05□□□□□ -0.64
CCDC178-201ENST00000300227 VSIRQ9H7M9 311 aa11.05□□□□□ -0.64
CCDC178-201ENST00000300227 FAM106CPP0CH98 169 aa11.05□□□□□ -0.64
CCDC178-201ENST00000300227 BRS3P32247 399 aa11.05□□□□□ -0.64
CCDC178-201ENST00000300227 BLOC1S1P78537 153 aa11.05□□□□□ -0.64
CCDC178-201ENST00000300227 ABHD5Q8WTS1 349 aa11.05□□□□□ -0.64
CCDC178-201ENST00000300227 SRSF12Q8WXF0 261 aaKnown RBP11.05□□□□□ -0.64
CCDC178-201ENST00000300227 A0A0U1RQK1 487 aa11.04□□□□□ -0.64
CCDC178-201ENST00000300227 PRSS46E5RG02 174 aa11.04□□□□□ -0.64
CCDC178-201ENST00000300227 AKR1C1Q04828 323 aa11.04□□□□□ -0.64
CCDC178-201ENST00000300227 AANATQ16613 207 aa11.04□□□□□ -0.64
CCDC178-201ENST00000300227 ARSJQ5FYB0 599 aaPredicted RBP11.04□□□□□ -0.64
CCDC178-201ENST00000300227 ZNF709Q8N972 641 aa11.04□□□□□ -0.64
CCDC178-201ENST00000300227 ANKRD34BA5PLL1 514 aa11.04□□□□□ -0.64
CCDC178-201ENST00000300227 MFSD2BA6NFX1 497 aa11.04□□□□□ -0.64
CCDC178-201ENST00000300227 SSBP2P81877 361 aaPredicted RBP11.04□□□□□ -0.64
CCDC178-201ENST00000300227 C5orf64Q2M2E5 130 aa11.04□□□□□ -0.64
CCDC178-201ENST00000300227 SSMEM1Q8WWF3 244 aa11.04□□□□□ -0.64
CCDC178-201ENST00000300227 P2RX4Q99571 388 aa11.04□□□□□ -0.64
CCDC178-201ENST00000300227 FAM96BQ9Y3D0 163 aa11.04□□□□□ -0.64
CCDC178-201ENST00000300227 TRAV20A0A0B4J274 112 aa11.03□□□□□ -0.64
CCDC178-201ENST00000300227 IGLC7A0M8Q6 106 aa11.03□□□□□ -0.64
CCDC178-201ENST00000300227 C2orf83Q53S99 150 aa11.03□□□□□ -0.64
CCDC178-201ENST00000300227 NPCDR1Q9BY65 106 aa11.03□□□□□ -0.64
CCDC178-201ENST00000300227 UMAD1C9J7I0 102 aa11.03□□□□□ -0.64
CCDC178-201ENST00000300227 RAB5CP51148 216 aa11.03□□□□□ -0.64
CCDC178-201ENST00000300227 FXYD3Q14802 87 aa11.03□□□□□ -0.64
CCDC178-201ENST00000300227 TREML4Q6UXN2 200 aa11.03□□□□□ -0.64
CCDC178-201ENST00000300227 LRRC75A-AS1Q8N1F1 130 aa11.03□□□□□ -0.64
CCDC178-201ENST00000300227 C22orf15Q8WYQ4 148 aa11.03□□□□□ -0.64
CCDC178-201ENST00000300227 MARC2Q969Z3 335 aa11.03□□□□□ -0.64
CCDC178-201ENST00000300227 PARP11Q9NR21 331 aa11.03□□□□□ -0.64
CCDC178-201ENST00000300227 RPRMQ9NS64 109 aa11.03□□□□□ -0.64
CCDC178-201ENST00000300227 NOTCH2Q04721 2471 aa11.03□□□□□ -0.64
CCDC178-201ENST00000300227 TSPAN15O95858 294 aa11.03□□□□□ -0.64
CCDC178-201ENST00000300227 DLK1P80370 383 aa11.03□□□□□ -0.64
CCDC178-201ENST00000300227 VWC2Q2TAL6 325 aa11.03□□□□□ -0.64
CCDC178-201ENST00000300227 NPBQ8NG41 125 aa11.03□□□□□ -0.64
CCDC178-201ENST00000300227 NARS2Q96I59 477 aaKnown RBP11.03□□□□□ -0.64
CCDC178-201ENST00000300227 WDR83OSQ9Y284 106 aa11.03□□□□□ -0.64
CCDC178-201ENST00000300227 NDUFA3O95167 84 aa11.02□□□□□ -0.65
CCDC178-201ENST00000300227 OPRK1P41145 380 aa11.02□□□□□ -0.65
CCDC178-201ENST00000300227 LOXL1Q08397 574 aaPredicted RBP11.02□□□□□ -0.65
CCDC178-201ENST00000300227 TMEM219Q86XT9 240 aa11.02□□□□□ -0.65
CCDC178-201ENST00000300227 TMEM231Q9H6L2 316 aa11.02□□□□□ -0.65
CCDC178-201ENST00000300227 MED9Q9NWA0 146 aa11.02□□□□□ -0.65
CCDC178-201ENST00000300227 UNC79Q9P2D8 2635 aa11.02□□□□□ -0.65
CCDC178-201ENST00000300227 IGHV3-21A0A0B4J1V1 117 aa11.02□□□□□ -0.65
CCDC178-201ENST00000300227 TRIM77I1YAP6 450 aa11.02□□□□□ -0.65
CCDC178-201ENST00000300227 MAS1LP35410 378 aa11.02□□□□□ -0.65
CCDC178-201ENST00000300227 SUB1P53999 127 aaKnown RBP eCLIP11.02□□□□□ -0.65
CCDC178-201ENST00000300227 BSXQ3C1V8 233 aa11.02□□□□□ -0.65
CCDC178-201ENST00000300227 SFT2D1Q8WV19 159 aa11.02□□□□□ -0.65
CCDC178-201ENST00000300227 MISP3Q96FF7 219 aa11.02□□□□□ -0.65
CCDC178-201ENST00000300227 ACY3Q96HD9 319 aa11.02□□□□□ -0.65
CCDC178-201ENST00000300227 PSMG3Q9BT73 122 aaPredicted RBP11.02□□□□□ -0.65
CCDC178-201ENST00000300227 NPVFQ9HCQ7 196 aa11.02□□□□□ -0.65
CCDC178-201ENST00000300227 TLN2Q9Y4G6 2542 aa11.01□□□□□ -0.65
CCDC178-201ENST00000300227 SH2D7A6NKC9 451 aaPredicted RBP11.01□□□□□ -0.65
CCDC178-201ENST00000300227 TEX22C9J3V5 150 aa11.01□□□□□ -0.65
CCDC178-201ENST00000300227 SCAF4O95104 1147 aaKnown RBP11.01□□□□□ -0.65
CCDC178-201ENST00000300227 DEFA4P12838 97 aa11.01□□□□□ -0.65
CCDC178-201ENST00000300227 RAB2AP61019 212 aa11.01□□□□□ -0.65
CCDC178-201ENST00000300227 TMEM249Q2WGJ8 235 aa11.01□□□□□ -0.65
CCDC178-201ENST00000300227 KLF17Q5JT82 389 aaPredicted RBP11.01□□□□□ -0.65
CCDC178-201ENST00000300227 FFAR4Q5NUL3 377 aa11.01□□□□□ -0.65
CCDC178-201ENST00000300227 ACSM6Q6P461 480 aa11.01□□□□□ -0.65
CCDC178-201ENST00000300227 Q8N6K4 173 aa11.01□□□□□ -0.65
CCDC178-201ENST00000300227 GGACTQ9BVM4 153 aa11.01□□□□□ -0.65
CCDC178-201ENST00000300227 ITPR2Q14571 2701 aa11.01□□□□□ -0.65
CCDC178-201ENST00000300227 H2AFB1P0C5Y9 115 aa11.01□□□□□ -0.65
CCDC178-201ENST00000300227 CX3CL1P78423 397 aa11.01□□□□□ -0.65
CCDC178-201ENST00000300227 EBI3Q14213 229 aa11.01□□□□□ -0.65
CCDC178-201ENST00000300227 WFDC11Q8NEX6 87 aa11.01□□□□□ -0.65
CCDC178-201ENST00000300227 OR2T6Q8NHC8 308 aa11.01□□□□□ -0.65
CCDC178-201ENST00000300227 PARD6GQ9BYG4 376 aaPredicted RBP11.01□□□□□ -0.65
CCDC178-201ENST00000300227 HMGB3O15347 200 aaKnown RBP11□□□□□ -0.65
CCDC178-201ENST00000300227 SRSF3P84103 164 aaKnown RBP11□□□□□ -0.65
CCDC178-201ENST00000300227 TOR2AQ5JU69 321 aa11□□□□□ -0.65
CCDC178-201ENST00000300227 LCN15Q6UWW0 184 aa11□□□□□ -0.65
CCDC178-201ENST00000300227 MRPL41Q8IXM3 137 aaKnown RBP11□□□□□ -0.65
CCDC178-201ENST00000300227 MGST2Q99735 147 aa11□□□□□ -0.65
CCDC178-201ENST00000300227 SERF2P84101 59 aa11□□□□□ -0.65
CCDC178-201ENST00000300227 KRTAP1-3Q8IUG1 177 aa11□□□□□ -0.65
CCDC178-201ENST00000300227 C17orf112F2Z3M2 114 aa11□□□□□ -0.65
CCDC178-201ENST00000300227 INS-IGF2F8WCM5 200 aa11□□□□□ -0.65
CCDC178-201ENST00000300227 IGHV4-31P0DP07 118 aa11□□□□□ -0.65
CCDC178-201ENST00000300227 GATA3P23771 443 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms