RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 NAV3Q8IVL0 2385 aa13.84□□□□□ -0.19
RABGGTA-201ENST00000216840 IFNA1P01562 189 aa13.84□□□□□ -0.19
RABGGTA-201ENST00000216840 AWAT1Q58HT5 328 aa13.84□□□□□ -0.19
RABGGTA-201ENST00000216840 KCNIP2Q9NS61 270 aa13.84□□□□□ -0.19
RABGGTA-201ENST00000216840 SIGLEC9Q9Y336 463 aa13.84□□□□□ -0.19
RABGGTA-201ENST00000216840 TIMM23O14925 209 aa13.83□□□□□ -0.2
RABGGTA-201ENST00000216840 CEBPGP53567 150 aa13.83□□□□□ -0.2
RABGGTA-201ENST00000216840 PAX2Q02962 417 aa13.83□□□□□ -0.2
RABGGTA-201ENST00000216840 CD69Q07108 199 aa13.83□□□□□ -0.2
RABGGTA-201ENST00000216840 MLANAQ16655 118 aa13.83□□□□□ -0.2
RABGGTA-201ENST00000216840 VMO1Q7Z5L0 202 aa13.83□□□□□ -0.2
RABGGTA-201ENST00000216840 TMEM144Q7Z5S9 345 aa13.83□□□□□ -0.2
RABGGTA-201ENST00000216840 BPESC1Q9GZL8 116 aa13.83□□□□□ -0.2
RABGGTA-201ENST00000216840 VAX2Q9UIW0 290 aa13.83□□□□□ -0.2
RABGGTA-201ENST00000216840 DOPEY1Q5JWR5 2465 aa13.83□□□□□ -0.2
RABGGTA-201ENST00000216840 IGHV4-39P01824 125 aa13.83□□□□□ -0.2
RABGGTA-201ENST00000216840 LMO4P61968 165 aa13.83□□□□□ -0.2
RABGGTA-201ENST00000216840 RAB31Q13636 194 aa13.83□□□□□ -0.2
RABGGTA-201ENST00000216840 GAMTQ14353 236 aa13.83□□□□□ -0.2
RABGGTA-201ENST00000216840 AKIRIN2Q53H80 203 aa13.83□□□□□ -0.2
RABGGTA-201ENST00000216840 RBMS3Q6XE24 437 aaKnown RBP13.83□□□□□ -0.2
RABGGTA-201ENST00000216840 LHFPL4Q7Z7J7 247 aa13.83□□□□□ -0.2
RABGGTA-201ENST00000216840 STPG3Q8N7X2 389 aa13.83□□□□□ -0.2
RABGGTA-201ENST00000216840 RNF5Q99942 180 aa13.83□□□□□ -0.2
RABGGTA-201ENST00000216840 C20orf24Q9BUV8 137 aa13.83□□□□□ -0.2
RABGGTA-201ENST00000216840 METTL1Q9UBP6 276 aaKnown RBP13.83□□□□□ -0.2
RABGGTA-201ENST00000216840 HILPDAQ9Y5L2 63 aa13.83□□□□□ -0.2
RABGGTA-201ENST00000216840 M0R036 132 aa13.82□□□□□ -0.2
RABGGTA-201ENST00000216840 VENTXO95231 258 aa13.82□□□□□ -0.2
RABGGTA-201ENST00000216840 MAS1LP35410 378 aa13.82□□□□□ -0.2
RABGGTA-201ENST00000216840 CEACAM3P40198 252 aa13.82□□□□□ -0.2
RABGGTA-201ENST00000216840 RPL29P47914 159 aaKnown RBP13.82□□□□□ -0.2
RABGGTA-201ENST00000216840 B2MP61769 119 aa13.82□□□□□ -0.2
RABGGTA-201ENST00000216840 LCN2P80188 198 aa13.82□□□□□ -0.2
RABGGTA-201ENST00000216840 TNXAQ16473 311 aa13.82□□□□□ -0.2
RABGGTA-201ENST00000216840 CFHR4Q92496 578 aa13.82□□□□□ -0.2
RABGGTA-201ENST00000216840 P2RX4Q99571 388 aa13.82□□□□□ -0.2
RABGGTA-201ENST00000216840 PUS1Q9Y606 427 aaKnown RBP eCLIP13.82□□□□□ -0.2
RABGGTA-201ENST00000216840 TACC2O95359 2948 aa13.82□□□□□ -0.2
RABGGTA-201ENST00000216840 SPTAN1Q13813 2472 aaKnown RBP13.81□□□□□ -0.2
RABGGTA-201ENST00000216840 C7orf77A4D0Y5 90 aa13.81□□□□□ -0.2
RABGGTA-201ENST00000216840 SNRNP70P08621 437 aaKnown RBP13.81□□□□□ -0.2
RABGGTA-201ENST00000216840 GPX4P36969 197 aaPredicted RBP13.81□□□□□ -0.2
RABGGTA-201ENST00000216840 SIRPDQ9H106 197 aa13.81□□□□□ -0.2
RABGGTA-201ENST00000216840 RPS10P5Q9NQ39 176 aa13.81□□□□□ -0.2
RABGGTA-201ENST00000216840 IGKV1OR2-108A0A075B7D4 117 aa13.81□□□□□ -0.2
RABGGTA-201ENST00000216840 A0A1W2PRD5 423 aa13.81□□□□□ -0.2
RABGGTA-201ENST00000216840 A0A1W2PRF3 423 aa13.81□□□□□ -0.2
RABGGTA-201ENST00000216840 A0A1W2PRM7 423 aa13.81□□□□□ -0.2
RABGGTA-201ENST00000216840 IGLC7A0M8Q6 106 aa13.81□□□□□ -0.2
RABGGTA-201ENST00000216840 HOXB4P17483 251 aaPredicted RBP13.81□□□□□ -0.2
RABGGTA-201ENST00000216840 AKR1C3P42330 323 aa13.81□□□□□ -0.2
RABGGTA-201ENST00000216840 RPL27AP46776 148 aaKnown RBP13.81□□□□□ -0.2
RABGGTA-201ENST00000216840 COMPP49747 757 aaPredicted RBP13.81□□□□□ -0.2
RABGGTA-201ENST00000216840 SUB1P53999 127 aaKnown RBP eCLIP13.81□□□□□ -0.2
RABGGTA-201ENST00000216840 PRR20EP86478 221 aa13.81□□□□□ -0.2
RABGGTA-201ENST00000216840 PRR20CP86479 221 aa13.81□□□□□ -0.2
RABGGTA-201ENST00000216840 PRR20DP86480 221 aa13.81□□□□□ -0.2
RABGGTA-201ENST00000216840 PRR20BP86481 221 aa13.81□□□□□ -0.2
RABGGTA-201ENST00000216840 PRR20AP86496 221 aa13.81□□□□□ -0.2
RABGGTA-201ENST00000216840 HABP2Q14520 560 aaPredicted RBP13.81□□□□□ -0.2
RABGGTA-201ENST00000216840 SLC35E3Q7Z769 313 aa13.81□□□□□ -0.2
RABGGTA-201ENST00000216840 PPP1R27Q86WC6 154 aa13.81□□□□□ -0.2
RABGGTA-201ENST00000216840 GATAD1Q8WUU5 269 aa13.81□□□□□ -0.2
RABGGTA-201ENST00000216840 CACNG8Q8WXS5 425 aa13.81□□□□□ -0.2
RABGGTA-201ENST00000216840 FBXL15Q9H469 300 aa13.81□□□□□ -0.2
RABGGTA-201ENST00000216840 SLC45A2Q9UMX9 530 aa13.81□□□□□ -0.2
RABGGTA-201ENST00000216840 IGHV2-70DA0A0C4DH43 119 aa13.8□□□□□ -0.2
RABGGTA-201ENST00000216840 A0A1W2PPV4 95 aa13.8□□□□□ -0.2
RABGGTA-201ENST00000216840 H3BQ15 152 aa13.8□□□□□ -0.2
RABGGTA-201ENST00000216840 ACTL6BO94805 426 aa13.8□□□□□ -0.2
RABGGTA-201ENST00000216840 LINC00869P0C866 280 aa13.8□□□□□ -0.2
RABGGTA-201ENST00000216840 TMEM249Q2WGJ8 235 aa13.8□□□□□ -0.2
RABGGTA-201ENST00000216840 FAM90A2PQ658T7 463 aa13.8□□□□□ -0.2
RABGGTA-201ENST00000216840 SLC16A13Q7RTY0 426 aa13.8□□□□□ -0.2
RABGGTA-201ENST00000216840 RNASEH2CQ8TDP1 164 aaKnown RBP13.8□□□□□ -0.2
RABGGTA-201ENST00000216840 MANBALQ9NQG1 85 aa13.8□□□□□ -0.2
RABGGTA-201ENST00000216840 FLNCQ14315 2725 aa13.8□□□□□ -0.2
RABGGTA-201ENST00000216840 USP9XQ93008 2570 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-201ENST00000216840 WNK2Q9Y3S1 2297 aa13.8□□□□□ -0.2
RABGGTA-201ENST00000216840 REG1AP05451 166 aa13.79□□□□□ -0.2
RABGGTA-201ENST00000216840 PSMB3P49720 205 aa13.79□□□□□ -0.2
RABGGTA-201ENST00000216840 PDLIM4P50479 330 aa13.79□□□□□ -0.2
RABGGTA-201ENST00000216840 CD81P60033 236 aa13.79□□□□□ -0.2
RABGGTA-201ENST00000216840 KLF2Q9Y5W3 355 aaPredicted RBP13.79□□□□□ -0.2
RABGGTA-201ENST00000216840 PAX6P26367 422 aa13.79□□□□□ -0.2
RABGGTA-201ENST00000216840 MEF2BQ02080 365 aaPredicted RBP13.79□□□□□ -0.2
RABGGTA-201ENST00000216840 RHEBQ15382 184 aa13.79□□□□□ -0.2
RABGGTA-201ENST00000216840 IQCF2Q8IXL9 164 aa13.79□□□□□ -0.2
RABGGTA-201ENST00000216840 OR2T6Q8NHC8 308 aa13.79□□□□□ -0.2
RABGGTA-201ENST00000216840 SLC35E1Q96K37 410 aa13.79□□□□□ -0.2
RABGGTA-201ENST00000216840 CCL19Q99731 98 aa13.79□□□□□ -0.2
RABGGTA-201ENST00000216840 SPOCK3Q9BQ16 436 aa13.79□□□□□ -0.2
RABGGTA-201ENST00000216840 FNDC4Q9H6D8 234 aaPredicted RBP13.79□□□□□ -0.2
RABGGTA-201ENST00000216840 OR10J1P30954 320 aa13.78□□□□□ -0.2
RABGGTA-201ENST00000216840 TAGLN2P37802 199 aaKnown RBP13.78□□□□□ -0.2
RABGGTA-201ENST00000216840 GNB1P62873 340 aa13.78□□□□□ -0.2
RABGGTA-201ENST00000216840 SSBP2P81877 361 aaPredicted RBP13.78□□□□□ -0.2
RABGGTA-201ENST00000216840 MRPL41Q8IXM3 137 aaKnown RBP13.78□□□□□ -0.2
RABGGTA-201ENST00000216840 SMCO4Q9NRQ5 59 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms