RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Cd96Q3U0X8 602 aa12.4□□□□□ -0.42
Nup88-202ENSMUST00000108530 Cln6Q3U466 308 aa12.4□□□□□ -0.42
Nup88-202ENSMUST00000108530 Guk1Q64520 198 aa12.4□□□□□ -0.42
Nup88-202ENSMUST00000108530 Olfr923Q7TRB9 317 aa12.4□□□□□ -0.42
Nup88-202ENSMUST00000108530 Znrf1Q91V17 227 aa12.4□□□□□ -0.42
Nup88-202ENSMUST00000108530 Fam96bQ9D187 163 aa12.4□□□□□ -0.42
Nup88-202ENSMUST00000108530 Fbln5Q9WVH9 448 aa12.4□□□□□ -0.42
Nup88-202ENSMUST00000108530 Cmya5Q70KF4 3739 aa12.4□□□□□ -0.43
Nup88-202ENSMUST00000108530 Adamts17E9Q4D1 1122 aa12.4□□□□□ -0.43
Nup88-202ENSMUST00000108530 Olfr898L7N1Z5 316 aa12.4□□□□□ -0.43
Nup88-202ENSMUST00000108530 Gm5458L7N219 204 aa12.4□□□□□ -0.43
Nup88-202ENSMUST00000108530 Cd200O54901 278 aa12.4□□□□□ -0.43
Nup88-202ENSMUST00000108530 CrpP14847 225 aa12.4□□□□□ -0.43
Nup88-202ENSMUST00000108530 Rpl29P47915 160 aaKnown RBP12.4□□□□□ -0.43
Nup88-202ENSMUST00000108530 Cks2P56390 79 aa12.4□□□□□ -0.43
Nup88-202ENSMUST00000108530 Lsm5P62322 91 aa12.4□□□□□ -0.43
Nup88-202ENSMUST00000108530 Jagn1Q5XKN4 183 aa12.4□□□□□ -0.43
Nup88-202ENSMUST00000108530 RhofQ8BYP3 211 aa12.4□□□□□ -0.43
Nup88-202ENSMUST00000108530 CenpxQ8C4X1 78 aa12.4□□□□□ -0.43
Nup88-202ENSMUST00000108530 Slc24a4Q8CGQ8 622 aa12.4□□□□□ -0.43
Nup88-202ENSMUST00000108530 Olfr976Q8VF15 326 aa12.4□□□□□ -0.43
Nup88-202ENSMUST00000108530 PpifQ99KR7 206 aaKnown RBP12.4□□□□□ -0.43
Nup88-202ENSMUST00000108530 Gm3550W4VSN7 160 aa12.4□□□□□ -0.43
Nup88-202ENSMUST00000108530 Olfr122W4VSP0 330 aa12.4□□□□□ -0.43
Nup88-202ENSMUST00000108530 1700025C18RikA2A580 89 aa12.39□□□□□ -0.43
Nup88-202ENSMUST00000108530 Cldn34dA2AGU5 210 aa12.39□□□□□ -0.43
Nup88-202ENSMUST00000108530 Fam98cE9PYD1 344 aa12.39□□□□□ -0.43
Nup88-202ENSMUST00000108530 Sult2a4L7N245 285 aa12.39□□□□□ -0.43
Nup88-202ENSMUST00000108530 Cdkn1bP46414 197 aa12.39□□□□□ -0.43
Nup88-202ENSMUST00000108530 Bex6Q3TZW7 114 aa12.39□□□□□ -0.43
Nup88-202ENSMUST00000108530 Gpr55Q3UJF0 327 aa12.39□□□□□ -0.43
Nup88-202ENSMUST00000108530 AdipoqQ60994 247 aa12.39□□□□□ -0.43
Nup88-202ENSMUST00000108530 Prdx2Q61171 198 aaKnown RBP12.39□□□□□ -0.43
Nup88-202ENSMUST00000108530 Ash1lQ99MY8 2958 aa12.39□□□□□ -0.43
Nup88-202ENSMUST00000108530 Zfp982A2A8Q4 368 aa12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 Ly6g6fB2RXM6 300 aa12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 Olfr571E9Q407 322 aa12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 Ankrd66J3QNN4 192 aa12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 Kcns2O35174 477 aa12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 Cxcl13O55038 109 aa12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 H3f3cP02301 136 aa12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 PipP02816 146 aa12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 Gm10645Q3UPY1 145 aa12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 Ctxn2Q3URE8 81 aa12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 Slc25a35Q5SWT3 300 aa12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 Commd3Q63829 195 aa12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 EpopQ7TNS8 369 aa12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 Prss35Q8C0F9 409 aa12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 PigmQ8C2R7 423 aa12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 Inpp5kQ8C5L6 468 aa12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 Q8WUR0 141 aa12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 Lmo1Q924W9 156 aa12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 Med30Q9CQI9 178 aa12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 Dnajb12Q9QYI4 376 aaKnown RBP12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 Csmd1Q923L3 3564 aa12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 Gm15114B1B0X6 433 aa12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 P18526 117 aa12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 SgcaP82350 387 aa12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 Ang4Q3TMQ6 144 aa12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 Wdyhv1Q80WB5 209 aa12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 Mob3cQ8BJG4 216 aa12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 Olfr1384Q8VFA8 318 aa12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 Nxph3Q91VX5 252 aa12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 PbkQ9JJ78 330 aa12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 Gdf15Q9Z0J7 303 aa12.38□□□□□ -0.43
Nup88-202ENSMUST00000108530 Rps23P62267 143 aaKnown RBP12.37□□□□□ -0.43
Nup88-202ENSMUST00000108530 CycsP62897 105 aaKnown RBP12.37□□□□□ -0.43
Nup88-202ENSMUST00000108530 Zic4Q61467 341 aa12.37□□□□□ -0.43
Nup88-202ENSMUST00000108530 Psg17Q62056 475 aa12.37□□□□□ -0.43
Nup88-202ENSMUST00000108530 Clec4a1Q80UI7 245 aa12.37□□□□□ -0.43
Nup88-202ENSMUST00000108530 Cstl1Q80Y72 140 aa12.37□□□□□ -0.43
Nup88-202ENSMUST00000108530 Olfr135Q8VEY4 312 aa12.37□□□□□ -0.43
Nup88-202ENSMUST00000108530 Olfr46Q8VGJ4 318 aa12.37□□□□□ -0.43
Nup88-202ENSMUST00000108530 Prss30Q9QYZ9 310 aa12.37□□□□□ -0.43
Nup88-202ENSMUST00000108530 SonQ9QX47 2444 aaKnown RBP12.37□□□□□ -0.43
Nup88-202ENSMUST00000108530 Olfr1406E9Q8X1 310 aa12.37□□□□□ -0.43
Nup88-202ENSMUST00000108530 Cryba1P02525 198 aa12.37□□□□□ -0.43
Nup88-202ENSMUST00000108530 HbzP06467 142 aa12.37□□□□□ -0.43
Nup88-202ENSMUST00000108530 Loxl1P97873 607 aa12.37□□□□□ -0.43
Nup88-202ENSMUST00000108530 Gm813Q3UWK9 176 aa12.37□□□□□ -0.43
Nup88-202ENSMUST00000108530 Olfr504Q7TRU7 318 aa12.37□□□□□ -0.43
Nup88-202ENSMUST00000108530 Vmn1r229Q8R2A9 306 aa12.37□□□□□ -0.43
Nup88-202ENSMUST00000108530 Tmbim7Q9D592 302 aa12.37□□□□□ -0.43
Nup88-202ENSMUST00000108530 Rcl1Q9JJT0 373 aaKnown RBP12.37□□□□□ -0.43
Nup88-202ENSMUST00000108530 Ighv9-2A0A0B4J1J4 117 aa12.36□□□□□ -0.43
Nup88-202ENSMUST00000108530 Gm2026A2ART4 498 aa12.36□□□□□ -0.43
Nup88-202ENSMUST00000108530 Gm14443A2ARX0 610 aa12.36□□□□□ -0.43
Nup88-202ENSMUST00000108530 Olfr628K7N6B2 316 aa12.36□□□□□ -0.43
Nup88-202ENSMUST00000108530 Rdh16O54909 317 aa12.36□□□□□ -0.43
Nup88-202ENSMUST00000108530 Zfp799Q8BHK4 648 aa12.36□□□□□ -0.43
Nup88-202ENSMUST00000108530 JkampQ8BI36 311 aa12.36□□□□□ -0.43
Nup88-202ENSMUST00000108530 Hes7Q8BKT2 225 aa12.36□□□□□ -0.43
Nup88-202ENSMUST00000108530 Fn3krpQ8K274 309 aa12.36□□□□□ -0.43
Nup88-202ENSMUST00000108530 4931428L18RikQ9D4S9 127 aa12.36□□□□□ -0.43
Nup88-202ENSMUST00000108530 2900055J20RikQ9D6G3 140 aa12.36□□□□□ -0.43
Nup88-202ENSMUST00000108530 IcaQ9DBD0 700 aa12.36□□□□□ -0.43
Nup88-202ENSMUST00000108530 Zfand6Q9DCH6 223 aa12.36□□□□□ -0.43
Nup88-202ENSMUST00000108530 Barx1Q9ER42 254 aa12.36□□□□□ -0.43
Nup88-202ENSMUST00000108530 Cldn15Q9Z0S5 227 aa12.36□□□□□ -0.43
Nup88-202ENSMUST00000108530 Olfr1289A0A288CFY5 326 aa12.36□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms