RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Slc38a11Q3USY0 453 aa18.96■□□□□ 0.63
Scn1b-201ENSMUST00000098548 MffQ6PCP5 291 aa18.96■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Zfp429Q7M6Y0 485 aa18.96■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Fam76bQ80XP8 339 aa18.96■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Ssxb2Q8C5Z3 165 aa18.96■□□□□ 0.63
Scn1b-201ENSMUST00000098548 AspaQ8R3P0 312 aa18.96■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Gm8797A0A0A6YW67 77 aa18.95■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Rhox7aA2A4F1 281 aa18.95■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Znf385cA2A5E6 429 aa18.95■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Tmsb15aA2AEH9 79 aa18.95■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Olfr243E9PV96 316 aa18.95■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Olfr773F6VS78 311 aa18.95■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Hoxb5P09079 269 aa18.95■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Gabrr1P56475 480 aa18.95■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Uba52P62984 128 aa18.95■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Yes1Q04736 541 aaKnown RBP18.95■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Zdhhc23Q5Y5T3 425 aa18.95■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Klf2Q60843 354 aaKnown RBP18.95■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Ccdc36Q6PDM4 574 aa18.95■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Hide1Q75VT8 222 aa18.95■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Mbnl2Q8C181 373 aaKnown RBP18.95■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Il34Q8R1R4 235 aa18.95■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Olfr135Q8VEY4 312 aa18.95■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Olfr772Q8VGC5 311 aa18.95■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Tsc22d4Q9EQN3 387 aa18.95■□□□□ 0.62
Scn1b-201ENSMUST00000098548 DscamQ9ERC8 2013 aa18.95■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Olfr789A0A1L1SV77 312 aa18.94■□□□□ 0.62
Scn1b-201ENSMUST00000098548 OdamA1E960 273 aa18.94■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Olfr1158A2BHP7 313 aa18.94■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Tcrg-V1P06325 135 aa18.94■□□□□ 0.62
Scn1b-201ENSMUST00000098548 CtsbP10605 339 aa18.94■□□□□ 0.62
Scn1b-201ENSMUST00000098548 TaglnP37804 201 aaKnown RBP18.94■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Clec3bP43025 202 aa18.94■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Olfr859Q7TRF5 309 aa18.94■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Vmn1r235Q8R297 328 aa18.94■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Vmn1r36Q8R2E3 305 aa18.94■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Olfr1350Q8VF34 308 aa18.94■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Olfr1280Q8VGG8 305 aa18.94■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Prss21Q9JHJ7 324 aa18.94■□□□□ 0.62
Scn1b-201ENSMUST00000098548 MthfrQ9WU20 654 aa18.94■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Olfr1104A2AVB5 310 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 4931422A03RikA2BHN9 113 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Prr19B2RW88 366 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Ly6g6fB2RXM6 300 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Gm14548E9Q1Z6 680 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 H2-M10.1O19443 331 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 P01658 132 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 PrkacaP05132 351 aaKnown RBP18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 LoxP28301 411 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Col8a1Q00780 744 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Gm10840Q3V2K9 103 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Olfr1211Q7TR09 311 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Olfr504Q7TRU7 318 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Olfr1298Q8VGE6 312 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Cldn15Q9Z0S5 227 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Olfr418A0A140T8J6 310 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Atxn7l3A2AWT3 347 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Gm6526G3X9Q9 198 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 P01649 108 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Saa1P05366 122 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 GzmdP11033 252 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 PtgirP43252 415 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Gm10775Q3V290 127 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Rtl6Q505G4 243 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Spin2cQ6NVE3 257 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Olfr923Q7TRB9 317 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Olfr874Q7TRE6 310 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Igfbpl1Q80W15 270 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Cbln4Q8BME9 198 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Dcun1d4Q8CCA0 292 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Vmn1r229Q8R2A9 306 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Vmn1r59Q8R2B9 310 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Chst1Q9EQC0 411 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 CadB2RQC6 2225 aa18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Gcn1E9PVA8 2671 aaKnown RBP18.93■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Gm28285A0A087WQ54 102 aa18.92■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Gm11756A2BEJ1 356 aa18.92■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Olfr898L7N1Z5 316 aa18.92■□□□□ 0.62
Scn1b-201ENSMUST00000098548 SdcbpO08992 299 aa18.92■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Evx1P23683 416 aa18.92■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Ap2s1P62743 142 aa18.92■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Traf4Q61382 470 aa18.92■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Kiaa0513Q8R0A7 407 aa18.92■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Nol3Q9D1X0 220 aa18.92■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Tex37Q9DAG4 180 aa18.92■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Ap4m1Q9JKC7 449 aa18.92■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Cav2Q9WVC3 162 aa18.92■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Sptbn1Q62261 2363 aaKnown RBP18.91■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Olfr588-ps1A0A1B0GSZ2 313 aa18.91■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Rd3lB2RV38 197 aa18.91■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Gm11009F7CWA7 138 aa18.91■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Cdk2ap1O35207 114 aa18.91■□□□□ 0.62
Scn1b-201ENSMUST00000098548 FblP35550 327 aaKnown RBP18.91■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Rpl29P47915 160 aaKnown RBP18.91■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Gabra1P62812 455 aa18.91■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Vmn1r15Q14C10 299 aa18.91■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Zfp941Q3URY5 674 aa18.91■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Olfr924Q7TRB8 308 aa18.91■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Lrtm2Q8BGX3 370 aa18.91■□□□□ 0.62
Scn1b-201ENSMUST00000098548 Ptrh2Q8R2Y8 181 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 43.5 ms