RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 AKR1C8PQ5T2L2 129 aa13.3□□□□□ -0.28
PHGDH-216ENST00000641375 DPPA3Q6W0C5 159 aa13.3□□□□□ -0.28
PHGDH-216ENST00000641375 KPTNQ9Y664 436 aa13.3□□□□□ -0.28
PHGDH-216ENST00000641375 TACC2O95359 2948 aa13.3□□□□□ -0.28
PHGDH-216ENST00000641375 ARHGAP32A7KAX9 2087 aa13.3□□□□□ -0.28
PHGDH-216ENST00000641375 UBR5O95071 2799 aaPredicted RBP13.3□□□□□ -0.28
PHGDH-216ENST00000641375 AKAP6Q13023 2319 aa13.3□□□□□ -0.28
PHGDH-216ENST00000641375 UBE2L5PA0A1B0GUS4 154 aa13.3□□□□□ -0.28
PHGDH-216ENST00000641375 CLN5O75503 358 aa13.3□□□□□ -0.28
PHGDH-216ENST00000641375 RPL8P62917 257 aaKnown RBP13.3□□□□□ -0.28
PHGDH-216ENST00000641375 SERF2P84101 59 aa13.3□□□□□ -0.28
PHGDH-216ENST00000641375 VMA21Q3ZAQ7 101 aa13.3□□□□□ -0.28
PHGDH-216ENST00000641375 TMEM167AQ8TBQ9 72 aa13.3□□□□□ -0.28
PHGDH-216ENST00000641375 TAF15Q92804 592 aaKnown RBP eCLIP13.3□□□□□ -0.28
PHGDH-216ENST00000641375 UNKLQ9H9P5 680 aaKnown RBP13.3□□□□□ -0.28
PHGDH-216ENST00000641375 PLEKHA3Q9HB20 300 aa13.3□□□□□ -0.28
PHGDH-216ENST00000641375 SIRT7Q9NRC8 400 aa13.3□□□□□ -0.28
PHGDH-216ENST00000641375 LY6LH3BQJ8 138 aa13.29□□□□□ -0.28
PHGDH-216ENST00000641375 TSPAN15O95858 294 aa13.29□□□□□ -0.28
PHGDH-216ENST00000641375 HTR1DP28221 377 aa13.29□□□□□ -0.28
PHGDH-216ENST00000641375 CEACAM3P40198 252 aa13.29□□□□□ -0.28
PHGDH-216ENST00000641375 FHITP49789 147 aa13.29□□□□□ -0.28
PHGDH-216ENST00000641375 PRB3Q04118 309 aaPredicted RBP13.29□□□□□ -0.28
PHGDH-216ENST00000641375 VWC2Q2TAL6 325 aa13.29□□□□□ -0.28
PHGDH-216ENST00000641375 COMMD1Q8N668 190 aa13.29□□□□□ -0.28
PHGDH-216ENST00000641375 FAM213BQ8TBF2 198 aa13.29□□□□□ -0.28
PHGDH-216ENST00000641375 RBMXL1Q96E39 390 aaKnown RBP13.29□□□□□ -0.28
PHGDH-216ENST00000641375 GGACTQ9BVM4 153 aa13.29□□□□□ -0.28
PHGDH-216ENST00000641375 COMMD5Q9GZQ3 224 aa13.29□□□□□ -0.28
PHGDH-216ENST00000641375 TEX50A0A1B0GTY4 177 aa13.28□□□□□ -0.28
PHGDH-216ENST00000641375 ZFP36P26651 326 aaKnown RBP13.28□□□□□ -0.28
PHGDH-216ENST00000641375 AKR1C1Q04828 323 aa13.28□□□□□ -0.28
PHGDH-216ENST00000641375 ETV3LQ6ZN32 361 aa13.28□□□□□ -0.28
PHGDH-216ENST00000641375 MOB3BQ86TA1 216 aa13.28□□□□□ -0.28
PHGDH-216ENST00000641375 SLC24A4Q8NFF2 622 aa13.28□□□□□ -0.28
PHGDH-216ENST00000641375 TIMM9Q9Y5J7 89 aa13.28□□□□□ -0.28
PHGDH-216ENST00000641375 TNCP24821 2201 aa13.28□□□□□ -0.28
PHGDH-216ENST00000641375 IGLV2-23P01705 113 aa13.28□□□□□ -0.28
PHGDH-216ENST00000641375 ATP5IP56385 69 aaPredicted RBP13.28□□□□□ -0.28
PHGDH-216ENST00000641375 CLDND2Q8NHS1 167 aa13.28□□□□□ -0.28
PHGDH-216ENST00000641375 RSG1Q9BU20 258 aa13.28□□□□□ -0.28
PHGDH-216ENST00000641375 HINT2Q9BX68 163 aa13.28□□□□□ -0.28
PHGDH-216ENST00000641375 DPM3Q9P2X0 92 aa13.28□□□□□ -0.28
PHGDH-216ENST00000641375 FBXO7Q9Y3I1 522 aa13.28□□□□□ -0.28
PHGDH-216ENST00000641375 RFNGQ9Y644 331 aa13.28□□□□□ -0.28
PHGDH-216ENST00000641375 NDUFS8O00217 210 aa13.27□□□□□ -0.28
PHGDH-216ENST00000641375 MT-ND4LP03901 98 aa13.27□□□□□ -0.28
PHGDH-216ENST00000641375 PPT1P50897 306 aa13.27□□□□□ -0.28
PHGDH-216ENST00000641375 RAB2AP61019 212 aa13.27□□□□□ -0.28
PHGDH-216ENST00000641375 LMO4P61968 165 aa13.27□□□□□ -0.28
PHGDH-216ENST00000641375 C9orf152Q5JTZ5 239 aa13.27□□□□□ -0.28
PHGDH-216ENST00000641375 OR1L8Q8NGR8 309 aa13.27□□□□□ -0.28
PHGDH-216ENST00000641375 HIST1H2BAQ96A08 127 aa13.27□□□□□ -0.28
PHGDH-216ENST00000641375 TREM1Q9NP99 234 aa13.27□□□□□ -0.28
PHGDH-216ENST00000641375 IGHV3-72A0A0B4J1Y9 119 aa13.27□□□□□ -0.29
PHGDH-216ENST00000641375 ODF3BA8MYP8 253 aa13.27□□□□□ -0.29
PHGDH-216ENST00000641375 RRHO14718 337 aa13.27□□□□□ -0.29
PHGDH-216ENST00000641375 NPY1RP25929 384 aa13.27□□□□□ -0.29
PHGDH-216ENST00000641375 TAS2R60P59551 318 aa13.27□□□□□ -0.29
PHGDH-216ENST00000641375 LCN2P80188 198 aa13.27□□□□□ -0.29
PHGDH-216ENST00000641375 PAX2Q02962 417 aa13.27□□□□□ -0.29
PHGDH-216ENST00000641375 CENPVQ7Z7K6 275 aaPredicted RBP13.27□□□□□ -0.29
PHGDH-216ENST00000641375 LFNGQ8NES3 379 aa13.27□□□□□ -0.29
PHGDH-216ENST00000641375 FAM168AQ92567 244 aa13.27□□□□□ -0.29
PHGDH-216ENST00000641375 RNF5Q99942 180 aa13.27□□□□□ -0.29
PHGDH-216ENST00000641375 PIMREGQ9BSJ6 248 aa13.27□□□□□ -0.29
PHGDH-216ENST00000641375 IGHV2-70DA0A0C4DH43 119 aa13.26□□□□□ -0.29
PHGDH-216ENST00000641375 FOXH1O75593 365 aa13.26□□□□□ -0.29
PHGDH-216ENST00000641375 COX6B1P14854 86 aa13.26□□□□□ -0.29
PHGDH-216ENST00000641375 CD1BP29016 333 aa13.26□□□□□ -0.29
PHGDH-216ENST00000641375 TPTE2P1Q5T6R2 138 aa13.26□□□□□ -0.29
PHGDH-216ENST00000641375 VMO1Q7Z5L0 202 aa13.26□□□□□ -0.29
PHGDH-216ENST00000641375 TEX45Q8NA69 505 aa13.26□□□□□ -0.29
PHGDH-216ENST00000641375 TMEM68Q96MH6 324 aa13.26□□□□□ -0.29
PHGDH-216ENST00000641375 SLC25A17O43808 307 aa13.25□□□□□ -0.29
PHGDH-216ENST00000641375 MYOD1P15172 320 aa13.25□□□□□ -0.29
PHGDH-216ENST00000641375 FGF7P21781 194 aa13.25□□□□□ -0.29
PHGDH-216ENST00000641375 RAB4BP61018 213 aa13.25□□□□□ -0.29
PHGDH-216ENST00000641375 SRSF1Q07955 248 aaKnown RBP eCLIP13.25□□□□□ -0.292e-10■■■□□ 18.2
PHGDH-216ENST00000641375 NDUFA4L2Q9NRX3 87 aa13.25□□□□□ -0.29
PHGDH-216ENST00000641375 A0A1B0GV90 55 aa13.25□□□□□ -0.29
PHGDH-216ENST00000641375 A0A1W2PPI3 338 aa13.25□□□□□ -0.29
PHGDH-216ENST00000641375 PRSS46E5RG02 174 aa13.25□□□□□ -0.29
PHGDH-216ENST00000641375 INS-IGF2F8WCM5 200 aa13.25□□□□□ -0.29
PHGDH-216ENST00000641375 AP4M1O00189 453 aa13.25□□□□□ -0.29
PHGDH-216ENST00000641375 OPN1MWP04001 364 aa13.25□□□□□ -0.29
PHGDH-216ENST00000641375 OPN1MW2P0DN77 364 aa13.25□□□□□ -0.29
PHGDH-216ENST00000641375 OPN1MW3P0DN78 364 aa13.25□□□□□ -0.29
PHGDH-216ENST00000641375 SNCAP37840 140 aa13.25□□□□□ -0.29
PHGDH-216ENST00000641375 DLK1P80370 383 aa13.25□□□□□ -0.29
PHGDH-216ENST00000641375 SRSF3P84103 164 aaKnown RBP13.25□□□□□ -0.29
PHGDH-216ENST00000641375 HCP5Q6MZN7 132 aa13.25□□□□□ -0.29
PHGDH-216ENST00000641375 TMEM170AQ8WVE7 144 aa13.25□□□□□ -0.29
PHGDH-216ENST00000641375 TUBA4BQ9H853 241 aa13.25□□□□□ -0.29
PHGDH-216ENST00000641375 A0A1W2PN81 502 aa13.24□□□□□ -0.29
PHGDH-216ENST00000641375 BTBD17A6NE02 478 aa13.24□□□□□ -0.29
PHGDH-216ENST00000641375 C17orf112F2Z3M2 114 aa13.24□□□□□ -0.29
PHGDH-216ENST00000641375 MPDU1O75352 247 aa13.24□□□□□ -0.29
PHGDH-216ENST00000641375 CA2P00918 260 aa13.24□□□□□ -0.29
PHGDH-216ENST00000641375 MDKP21741 143 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms