RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 ZNF418Q8TF45 676 aaPredicted RBP10.62□□□□□ -0.71
LINC00643-207ENST00000637212 C11orf1Q9H5F2 150 aa10.62□□□□□ -0.71
LINC00643-207ENST00000637212 PLEKHA3Q9HB20 300 aa10.62□□□□□ -0.71
LINC00643-207ENST00000637212 RCL1Q9Y2P8 373 aaKnown RBP10.62□□□□□ -0.71
LINC00643-207ENST00000637212 WSB1Q9Y6I7 421 aa10.62□□□□□ -0.71
LINC00643-207ENST00000637212 U3KQ87 197 aa10.62□□□□□ -0.71
LINC00643-207ENST00000637212 ZANQ9Y493 2812 aa10.61□□□□□ -0.71
LINC00643-207ENST00000637212 IGHV7-81A0A0B4J1V7 117 aa10.61□□□□□ -0.71
LINC00643-207ENST00000637212 MSGN1A6NI15 193 aa10.61□□□□□ -0.71
LINC00643-207ENST00000637212 SMLR1H3BR10 107 aa10.61□□□□□ -0.71
LINC00643-207ENST00000637212 SSSCA1O60232 199 aa10.61□□□□□ -0.71
LINC00643-207ENST00000637212 TSC22D2O75157 780 aa10.61□□□□□ -0.71
LINC00643-207ENST00000637212 CRLF1O75462 422 aa10.61□□□□□ -0.71
LINC00643-207ENST00000637212 FAM157CP0CG43 387 aa10.61□□□□□ -0.71
LINC00643-207ENST00000637212 MYOD1P15172 320 aa10.61□□□□□ -0.71
LINC00643-207ENST00000637212 PAX9P55771 341 aa10.61□□□□□ -0.71
LINC00643-207ENST00000637212 GNB1P62873 340 aa10.61□□□□□ -0.71
LINC00643-207ENST00000637212 ERHP84090 104 aaKnown RBP10.61□□□□□ -0.71
LINC00643-207ENST00000637212 ZNF546Q86UE3 836 aa10.61□□□□□ -0.71
LINC00643-207ENST00000637212 TMEM68Q96MH6 324 aa10.61□□□□□ -0.71
LINC00643-207ENST00000637212 JMJD8Q96S16 334 aa10.61□□□□□ -0.71
LINC00643-207ENST00000637212 OR5AC2Q9NZP5 309 aa10.61□□□□□ -0.71
LINC00643-207ENST00000637212 CGB1A6NKQ9 187 aa10.6□□□□□ -0.71
LINC00643-207ENST00000637212 INAFM1C9JVW0 142 aa10.6□□□□□ -0.71
LINC00643-207ENST00000637212 E7EUB6 86 aa10.6□□□□□ -0.71
LINC00643-207ENST00000637212 NXPH3O95157 252 aa10.6□□□□□ -0.71
LINC00643-207ENST00000637212 TMEM50AO95807 157 aa10.6□□□□□ -0.71
LINC00643-207ENST00000637212 OPN1MWP04001 364 aa10.6□□□□□ -0.71
LINC00643-207ENST00000637212 OPN1MW2P0DN77 364 aa10.6□□□□□ -0.71
LINC00643-207ENST00000637212 OPN1MW3P0DN78 364 aa10.6□□□□□ -0.71
LINC00643-207ENST00000637212 NUP62P37198 522 aaPredicted RBP10.6□□□□□ -0.71
LINC00643-207ENST00000637212 HOXA1P49639 335 aaPredicted RBP10.6□□□□□ -0.71
LINC00643-207ENST00000637212 SSBP2P81877 361 aaPredicted RBP10.6□□□□□ -0.71
LINC00643-207ENST00000637212 OR11H4Q8NGC9 324 aa10.6□□□□□ -0.71
LINC00643-207ENST00000637212 SRSF12Q8WXF0 261 aaKnown RBP10.6□□□□□ -0.71
LINC00643-207ENST00000637212 ARPC1AQ92747 370 aa10.6□□□□□ -0.71
LINC00643-207ENST00000637212 HINT2Q9BX68 163 aa10.6□□□□□ -0.71
LINC00643-207ENST00000637212 SLC25A31Q9H0C2 315 aa10.6□□□□□ -0.71
LINC00643-207ENST00000637212 HEYLQ9NQ87 328 aaPredicted RBP10.6□□□□□ -0.71
LINC00643-207ENST00000637212 PSENENQ9NZ42 101 aa10.6□□□□□ -0.71
LINC00643-207ENST00000637212 MBD2Q9UBB5 411 aa10.6□□□□□ -0.71
LINC00643-207ENST00000637212 ZFHX3Q15911 3703 aa10.6□□□□□ -0.71
LINC00643-207ENST00000637212 ACANP16112 2415 aa10.59□□□□□ -0.71
LINC00643-207ENST00000637212 FXYD6-FXYD2A0A087WZ82 144 aa10.59□□□□□ -0.71
LINC00643-207ENST00000637212 A0A1B0GW64 132 aa10.59□□□□□ -0.71
LINC00643-207ENST00000637212 TEX22C9J3V5 150 aa10.59□□□□□ -0.71
LINC00643-207ENST00000637212 KCNAB3O43448 404 aa10.59□□□□□ -0.71
LINC00643-207ENST00000637212 SCAF4O95104 1147 aaKnown RBP10.59□□□□□ -0.71
LINC00643-207ENST00000637212 IGHG2P01859 326 aa10.59□□□□□ -0.71
LINC00643-207ENST00000637212 HNRNPCP07910 306 aaKnown RBP eCLIP10.59□□□□□ -0.71
LINC00643-207ENST00000637212 IAPPP10997 89 aa10.59□□□□□ -0.71
LINC00643-207ENST00000637212 EGR2P11161 476 aaPredicted RBP10.59□□□□□ -0.71
LINC00643-207ENST00000637212 HTR2BP41595 481 aa10.59□□□□□ -0.71
LINC00643-207ENST00000637212 RPL15P61313 204 aaKnown RBP10.59□□□□□ -0.71
LINC00643-207ENST00000637212 Q71RC1 249 aaPredicted RBP10.59□□□□□ -0.71
LINC00643-207ENST00000637212 OR2C3Q8N628 320 aa10.59□□□□□ -0.71
LINC00643-207ENST00000637212 INO80EQ8NBZ0 244 aaPredicted RBP10.59□□□□□ -0.71
LINC00643-207ENST00000637212 DCUN1D4Q92564 292 aa10.59□□□□□ -0.71
LINC00643-207ENST00000637212 LYRM2Q9NU23 88 aaPredicted RBP10.59□□□□□ -0.71
LINC00643-207ENST00000637212 ZNF580Q9UK33 172 aa10.59□□□□□ -0.71
LINC00643-207ENST00000637212 TNFSF18Q9UNG2 199 aa10.59□□□□□ -0.71
LINC00643-207ENST00000637212 IGLC7A0M8Q6 106 aa10.58□□□□□ -0.72
LINC00643-207ENST00000637212 IGF1P05019 195 aa10.58□□□□□ -0.72
LINC00643-207ENST00000637212 OR13C7P0DN81 318 aa10.58□□□□□ -0.72
LINC00643-207ENST00000637212 RPL12P30050 165 aaKnown RBP10.58□□□□□ -0.72
LINC00643-207ENST00000637212 SNCAP37840 140 aa10.58□□□□□ -0.72
LINC00643-207ENST00000637212 CRIP2P52943 208 aaPredicted RBP10.58□□□□□ -0.72
LINC00643-207ENST00000637212 SUB1P53999 127 aaKnown RBP eCLIP10.58□□□□□ -0.72
LINC00643-207ENST00000637212 HILS1P60008 231 aa10.58□□□□□ -0.72
LINC00643-207ENST00000637212 BLCAPP62952 87 aa10.58□□□□□ -0.72
LINC00643-207ENST00000637212 WT1-ASQ06250 92 aa10.58□□□□□ -0.72
LINC00643-207ENST00000637212 TMEM267Q0VDI3 215 aaPredicted RBP10.58□□□□□ -0.72
LINC00643-207ENST00000637212 BSXQ3C1V8 233 aa10.58□□□□□ -0.72
LINC00643-207ENST00000637212 KRTAP21-3Q3LHN1 58 aa10.58□□□□□ -0.72
LINC00643-207ENST00000637212 AKIRIN2Q53H80 203 aa10.58□□□□□ -0.72
LINC00643-207ENST00000637212 SPINK9Q5DT21 86 aa10.58□□□□□ -0.72
LINC00643-207ENST00000637212 C10orf55Q5SWW7 151 aa10.58□□□□□ -0.72
LINC00643-207ENST00000637212 ACOT7LQ6ZUV0 252 aa10.58□□□□□ -0.72
LINC00643-207ENST00000637212 TTC9CQ8N5M4 171 aa10.58□□□□□ -0.72
LINC00643-207ENST00000637212 OR10W1Q8NGF6 305 aa10.58□□□□□ -0.72
LINC00643-207ENST00000637212 OR1L6Q8NGR2 347 aa10.58□□□□□ -0.72
LINC00643-207ENST00000637212 SGMS2Q8NHU3 365 aa10.58□□□□□ -0.72
LINC00643-207ENST00000637212 AQP10Q96PS8 301 aa10.58□□□□□ -0.72
LINC00643-207ENST00000637212 HSPB9Q9BQS6 159 aa10.58□□□□□ -0.72
LINC00643-207ENST00000637212 PRSS22Q9GZN4 317 aa10.58□□□□□ -0.72
LINC00643-207ENST00000637212 NPFFR1Q9GZQ6 430 aa10.58□□□□□ -0.72
LINC00643-207ENST00000637212 TNFRSF19Q9NS68 423 aa10.58□□□□□ -0.72
LINC00643-207ENST00000637212 STRAPQ9Y3F4 350 aaKnown RBP10.58□□□□□ -0.72
LINC00643-207ENST00000637212 NAV3Q8IVL0 2385 aa10.58□□□□□ -0.72
LINC00643-207ENST00000637212 NIPBLQ6KC79 2804 aaeCLIP10.57□□□□□ -0.72
LINC00643-207ENST00000637212 A0A0D9SG52 128 aa10.57□□□□□ -0.72
LINC00643-207ENST00000637212 DNAJC9-AS1A6NH13 148 aa10.57□□□□□ -0.72
LINC00643-207ENST00000637212 TSPAN9O75954 239 aa10.57□□□□□ -0.72
LINC00643-207ENST00000637212 IFNA10P01566 189 aa10.57□□□□□ -0.72
LINC00643-207ENST00000637212 CRYGCP07315 174 aa10.57□□□□□ -0.72
LINC00643-207ENST00000637212 HKR1P10072 659 aa10.57□□□□□ -0.72
LINC00643-207ENST00000637212 CAV2P51636 162 aa10.57□□□□□ -0.72
LINC00643-207ENST00000637212 OR2F1Q13607 317 aa10.57□□□□□ -0.72
LINC00643-207ENST00000637212 C2orf83Q53S99 150 aa10.57□□□□□ -0.72
LINC00643-207ENST00000637212 SPANXN5Q5MJ07 72 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms