RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 DEFA1P59665 94 aa6.64□□□□□ -1.35
CDKL5-209ENST00000635828 DEFA3P59666 94 aa6.64□□□□□ -1.35
CDKL5-209ENST00000635828 OXA1LQ15070 435 aa6.64□□□□□ -1.35
CDKL5-209ENST00000635828 TMEM170AQ8WVE7 144 aa6.64□□□□□ -1.35
CDKL5-209ENST00000635828 SCGB3A2Q96PL1 93 aa6.64□□□□□ -1.35
CDKL5-209ENST00000635828 MMP24Q9Y5R2 645 aa6.64□□□□□ -1.35
CDKL5-209ENST00000635828 SELENOKQ9Y6D0 94 aa6.64□□□□□ -1.35
CDKL5-209ENST00000635828 AP4M1O00189 453 aa6.63□□□□□ -1.35
CDKL5-209ENST00000635828 ACTL6BO94805 426 aa6.63□□□□□ -1.35
CDKL5-209ENST00000635828 RPL27AP46776 148 aaKnown RBP6.63□□□□□ -1.35
CDKL5-209ENST00000635828 H2BFSP57053 126 aa6.63□□□□□ -1.35
CDKL5-209ENST00000635828 FOXRED2Q8IWF2 684 aa6.63□□□□□ -1.35
CDKL5-209ENST00000635828 MMD2Q8IY49 270 aa6.63□□□□□ -1.35
CDKL5-209ENST00000635828 MINDY2Q8NBR6 621 aa6.63□□□□□ -1.35
CDKL5-209ENST00000635828 OR4A16Q8NH70 328 aa6.63□□□□□ -1.35
CDKL5-209ENST00000635828 ZNF431Q8TF32 576 aaPredicted RBP6.63□□□□□ -1.35
CDKL5-209ENST00000635828 ZFAND2BQ8WV99 257 aa6.63□□□□□ -1.35
CDKL5-209ENST00000635828 RRNAD1Q96FB5 475 aaKnown RBP6.63□□□□□ -1.35
CDKL5-209ENST00000635828 GNB4Q9HAV0 340 aa6.63□□□□□ -1.35
CDKL5-209ENST00000635828 A0A0B4J2A0 478 aa6.63□□□□□ -1.35
CDKL5-209ENST00000635828 OR13C7P0DN81 318 aa6.63□□□□□ -1.35
CDKL5-209ENST00000635828 PF4V1P10720 104 aa6.63□□□□□ -1.35
CDKL5-209ENST00000635828 PSMB8P28062 276 aa6.63□□□□□ -1.35
CDKL5-209ENST00000635828 FOXL1Q12952 345 aa6.63□□□□□ -1.35
CDKL5-209ENST00000635828 RGS21Q2M5E4 152 aa6.63□□□□□ -1.35
CDKL5-209ENST00000635828 LGI3Q8N145 548 aa6.63□□□□□ -1.35
CDKL5-209ENST00000635828 COMMD5Q9GZQ3 224 aa6.63□□□□□ -1.35
CDKL5-209ENST00000635828 COA4Q9NYJ1 87 aa6.63□□□□□ -1.35
CDKL5-209ENST00000635828 GSKIPQ9P0R6 139 aa6.63□□□□□ -1.35
CDKL5-209ENST00000635828 SHPKQ9UHJ6 478 aa6.63□□□□□ -1.35
CDKL5-209ENST00000635828 H3BP45 60 aa6.63□□□□□ -1.35
CDKL5-209ENST00000635828 TMEM50AO95807 157 aa6.63□□□□□ -1.35
CDKL5-209ENST00000635828 IFNA17P01571 189 aa6.63□□□□□ -1.35
CDKL5-209ENST00000635828 IAPPP10997 89 aa6.63□□□□□ -1.35
CDKL5-209ENST00000635828 VDAC1P21796 283 aa6.63□□□□□ -1.35
CDKL5-209ENST00000635828 PTTG1O95997 202 aa6.62□□□□□ -1.35
CDKL5-209ENST00000635828 C8orf86Q6ZUL3 223 aa6.62□□□□□ -1.35
CDKL5-209ENST00000635828 FANCD2OSQ96PS1 177 aa6.62□□□□□ -1.35
CDKL5-209ENST00000635828 CITED1Q99966 193 aa6.62□□□□□ -1.35
CDKL5-209ENST00000635828 GOSR2O14653 212 aa6.62□□□□□ -1.35
CDKL5-209ENST00000635828 OR2J3O76001 311 aa6.62□□□□□ -1.35
CDKL5-209ENST00000635828 SCGB1D2O95969 90 aa6.62□□□□□ -1.35
CDKL5-209ENST00000635828 IGLV1-40P01703 118 aa6.62□□□□□ -1.35
CDKL5-209ENST00000635828 POLR2GP62487 172 aaKnown RBP eCLIP6.62□□□□□ -1.35
CDKL5-209ENST00000635828 C3orf56Q8N813 242 aa6.62□□□□□ -1.35
CDKL5-209ENST00000635828 LRTM2Q8N967 370 aa6.62□□□□□ -1.35
CDKL5-209ENST00000635828 VSTM2AQ8TAG5 236 aa6.62□□□□□ -1.35
CDKL5-209ENST00000635828 MRPL36Q9P0J6 103 aaKnown RBP6.62□□□□□ -1.35
CDKL5-209ENST00000635828 FOXA2Q9Y261 457 aaPredicted RBP6.62□□□□□ -1.35
CDKL5-209ENST00000635828 hCG_2014768A0A024R1R8 64 aa6.62□□□□□ -1.35
CDKL5-209ENST00000635828 IGHV3-35A0A0C4DH35 117 aa6.62□□□□□ -1.35
CDKL5-209ENST00000635828 MFSD2BA6NFX1 497 aa6.62□□□□□ -1.35
CDKL5-209ENST00000635828 PITX3O75364 302 aa6.62□□□□□ -1.35
CDKL5-209ENST00000635828 SNAPC5O75971 98 aa6.62□□□□□ -1.35
CDKL5-209ENST00000635828 ANXA3P12429 323 aa6.62□□□□□ -1.35
CDKL5-209ENST00000635828 RAB9AP51151 201 aa6.62□□□□□ -1.35
CDKL5-209ENST00000635828 RPL15P61313 204 aaKnown RBP6.62□□□□□ -1.35
CDKL5-209ENST00000635828 Q5BKY6 102 aa6.62□□□□□ -1.35
CDKL5-209ENST00000635828 C12orf54Q6X4T0 127 aa6.62□□□□□ -1.35
CDKL5-209ENST00000635828 C12orf45Q8N5I9 185 aaPredicted RBP6.62□□□□□ -1.35
CDKL5-209ENST00000635828 OR11H7Q8NGC8 314 aa6.62□□□□□ -1.35
CDKL5-209ENST00000635828 TSPAN15O95858 294 aa6.61□□□□□ -1.35
CDKL5-209ENST00000635828 EDN2P20800 178 aa6.61□□□□□ -1.35
CDKL5-209ENST00000635828 LRRC37A5PQ49AS3 106 aa6.61□□□□□ -1.35
CDKL5-209ENST00000635828 AKIRIN2Q53H80 203 aa6.61□□□□□ -1.35
CDKL5-209ENST00000635828 P2RX4Q99571 388 aa6.61□□□□□ -1.35
CDKL5-209ENST00000635828 RBKSQ9H477 322 aa6.61□□□□□ -1.35
CDKL5-209ENST00000635828 FBXO24O75426 580 aa6.61□□□□□ -1.35
CDKL5-209ENST00000635828 CCNKO75909 580 aa6.61□□□□□ -1.35
CDKL5-209ENST00000635828 NDUFB8O95169 186 aa6.61□□□□□ -1.35
CDKL5-209ENST00000635828 IGHG4P01861 327 aa6.61□□□□□ -1.35
CDKL5-209ENST00000635828 CTRB1P17538 263 aa6.61□□□□□ -1.35
CDKL5-209ENST00000635828 CD83Q01151 205 aa6.61□□□□□ -1.35
CDKL5-209ENST00000635828 CTRB2Q6GPI1 263 aa6.61□□□□□ -1.35
CDKL5-209ENST00000635828 TCTEX1D1Q8N7M0 179 aa6.61□□□□□ -1.35
CDKL5-209ENST00000635828 MEGF8Q7Z7M0 2845 aa6.61□□□□□ -1.35
CDKL5-209ENST00000635828 ANKRD34BA5PLL1 514 aa6.61□□□□□ -1.35
CDKL5-209ENST00000635828 WRBO00258 174 aa6.61□□□□□ -1.35
CDKL5-209ENST00000635828 TPPP2P59282 170 aa6.61□□□□□ -1.35
CDKL5-209ENST00000635828 SMCO1Q147U7 214 aa6.61□□□□□ -1.35
CDKL5-209ENST00000635828 IAH1Q2TAA2 248 aaPredicted RBP6.61□□□□□ -1.35
CDKL5-209ENST00000635828 CHAC2Q8WUX2 184 aa6.61□□□□□ -1.35
CDKL5-209ENST00000635828 PINX1Q96BK5 328 aaKnown RBP6.61□□□□□ -1.35
CDKL5-209ENST00000635828 FAM212BQ9NTI7 297 aaPredicted RBP6.61□□□□□ -1.35
CDKL5-209ENST00000635828 IGHV3OR16-8A0A075B7F1 116 aa6.6□□□□□ -1.35
CDKL5-209ENST00000635828 TRAPPC2P0DI81 140 aa6.6□□□□□ -1.35
CDKL5-209ENST00000635828 TRAPPC2BP0DI82 140 aa6.6□□□□□ -1.35
CDKL5-209ENST00000635828 SULT1A3P0DMM9 295 aa6.6□□□□□ -1.35
CDKL5-209ENST00000635828 SULT1A4P0DMN0 295 aa6.6□□□□□ -1.35
CDKL5-209ENST00000635828 HSPE1P61604 102 aaKnown RBP6.6□□□□□ -1.35
CDKL5-209ENST00000635828 PRCDQ00LT1 54 aa6.6□□□□□ -1.35
CDKL5-209ENST00000635828 TNFRSF9Q07011 255 aa6.6□□□□□ -1.35
CDKL5-209ENST00000635828 OR1S1Q8NH92 325 aa6.6□□□□□ -1.35
CDKL5-209ENST00000635828 CHPT1Q8WUD6 406 aa6.6□□□□□ -1.35
CDKL5-209ENST00000635828 LSM10Q969L4 123 aaKnown RBP6.6□□□□□ -1.35
CDKL5-209ENST00000635828 PALMDQ9NP74 551 aa6.6□□□□□ -1.35
CDKL5-209ENST00000635828 DNAH3Q8TD57 4116 aa6.6□□□□□ -1.35
CDKL5-209ENST00000635828 TCRBV4S1A1TA0A5B7 111 aa6.6□□□□□ -1.35
CDKL5-209ENST00000635828 C5orf51A6NDU8 294 aa6.6□□□□□ -1.35
CDKL5-209ENST00000635828 PPP5D1E7EU14 171 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms