RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 PPP1CBP62140 327 aa8.95□□□□□ -0.98
CDH1-214ENST00000621016 ANXA2RQ3ZCQ2 193 aa8.95□□□□□ -0.98
CDH1-214ENST00000621016 FGFRL1Q8N441 504 aa8.95□□□□□ -0.98
CDH1-214ENST00000621016 LHX4Q969G2 390 aa8.95□□□□□ -0.98
CDH1-214ENST00000621016 RAB37Q96AX2 223 aa8.95□□□□□ -0.98
CDH1-214ENST00000621016 SLC39A9Q9NUM3 307 aa8.95□□□□□ -0.98
CDH1-214ENST00000621016 KALRNO60229 2985 aa8.95□□□□□ -0.98
CDH1-214ENST00000621016 APOBEC3AP31941 199 aaPredicted RBP8.95□□□□□ -0.98
CDH1-214ENST00000621016 SSTR5P35346 364 aa8.95□□□□□ -0.98
CDH1-214ENST00000621016 THBS3P49746 956 aa8.95□□□□□ -0.98
CDH1-214ENST00000621016 LINC00310P59036 64 aa8.95□□□□□ -0.98
CDH1-214ENST00000621016 GTF2H5Q6ZYL4 71 aa8.95□□□□□ -0.98
CDH1-214ENST00000621016 VKORC1L1Q8N0U8 176 aa8.95□□□□□ -0.98
CDH1-214ENST00000621016 DRAM1Q8N682 238 aa8.95□□□□□ -0.98
CDH1-214ENST00000621016 NEUROG1Q92886 237 aa8.95□□□□□ -0.98
CDH1-214ENST00000621016 TRGV5A0A0B4J1U4 118 aa8.94□□□□□ -0.98
CDH1-214ENST00000621016 IGLC7A0M8Q6 106 aa8.94□□□□□ -0.98
CDH1-214ENST00000621016 PF4V1P10720 104 aa8.94□□□□□ -0.98
CDH1-214ENST00000621016 TBC1D28Q2M2D7 210 aa8.94□□□□□ -0.98
CDH1-214ENST00000621016 OR5D13Q8NGL4 314 aa8.94□□□□□ -0.98
CDH1-214ENST00000621016 NINJ1Q92982 152 aa8.94□□□□□ -0.98
CDH1-214ENST00000621016 GUCD1Q96NT3 240 aa8.94□□□□□ -0.98
CDH1-214ENST00000621016 SIGMAR1Q99720 223 aa8.94□□□□□ -0.98
CDH1-214ENST00000621016 MCRIP2Q9BUT9 160 aaKnown RBP8.94□□□□□ -0.98
CDH1-214ENST00000621016 GEMIN7Q9H840 131 aaKnown RBP8.94□□□□□ -0.98
CDH1-214ENST00000621016 KLRC4-KLRK1H3BQV0 150 aa8.94□□□□□ -0.98
CDH1-214ENST00000621016 SIVA1O15304 175 aa8.94□□□□□ -0.98
CDH1-214ENST00000621016 BCL2P10415 239 aa8.94□□□□□ -0.98
CDH1-214ENST00000621016 MPV17P39210 176 aa8.94□□□□□ -0.98
CDH1-214ENST00000621016 BAXQ07812 192 aa8.94□□□□□ -0.98
CDH1-214ENST00000621016 SPATA31B1PQ5VZV4 182 aa8.94□□□□□ -0.98
CDH1-214ENST00000621016 WDR82Q6UXN9 313 aa8.94□□□□□ -0.98
CDH1-214ENST00000621016 SMIM20Q8N5G0 67 aa8.94□□□□□ -0.98
CDH1-214ENST00000621016 RTL8AQ9BWD3 113 aa8.94□□□□□ -0.98
CDH1-214ENST00000621016 IGHV1-69-2A0A0G2JMI3 117 aa8.93□□□□□ -0.98
CDH1-214ENST00000621016 DPRXA6NFQ7 191 aa8.93□□□□□ -0.98
CDH1-214ENST00000621016 NKX2-8O15522 239 aa8.93□□□□□ -0.98
CDH1-214ENST00000621016 KRTAP27-1Q3LI81 207 aa8.93□□□□□ -0.98
CDH1-214ENST00000621016 HES3Q5TGS1 186 aa8.93□□□□□ -0.98
CDH1-214ENST00000621016 OR4F5Q8NH21 305 aa8.93□□□□□ -0.98
CDH1-214ENST00000621016 TMEM45BQ96B21 275 aa8.93□□□□□ -0.98
CDH1-214ENST00000621016 PERPQ96FX8 193 aa8.93□□□□□ -0.98
CDH1-214ENST00000621016 OR4F4Q96R69 305 aa8.93□□□□□ -0.98
CDH1-214ENST00000621016 CTDSP1Q9GZU7 261 aa8.93□□□□□ -0.98
CDH1-214ENST00000621016 ELOVL5Q9NYP7 299 aa8.93□□□□□ -0.98
CDH1-214ENST00000621016 KCNIP1Q9NZI2 227 aa8.93□□□□□ -0.98
CDH1-214ENST00000621016 SPRR3Q9UBC9 169 aa8.93□□□□□ -0.98
CDH1-214ENST00000621016 CTRLP40313 264 aa8.93□□□□□ -0.98
CDH1-214ENST00000621016 RPL30P62888 115 aaKnown RBP8.93□□□□□ -0.98
CDH1-214ENST00000621016 PSG7Q13046 419 aa8.93□□□□□ -0.98
CDH1-214ENST00000621016 SGMS2Q8NHU3 365 aa8.93□□□□□ -0.98
CDH1-214ENST00000621016 UHRF2Q96PU4 802 aa8.93□□□□□ -0.98
CDH1-214ENST00000621016 METRNQ9UJH8 293 aa8.93□□□□□ -0.98
CDH1-214ENST00000621016 PSG11Q9UQ72 335 aa8.93□□□□□ -0.98
CDH1-214ENST00000621016 TSSC4Q9Y5U2 329 aaPredicted RBP8.93□□□□□ -0.98
CDH1-214ENST00000621016 ARL2-SNX15V9GYD0 113 aa8.93□□□□□ -0.98
CDH1-214ENST00000621016 MED13LQ71F56 2210 aa8.93□□□□□ -0.98
CDH1-214ENST00000621016 SLC38A11Q08AI6 406 aa8.93□□□□□ -0.98
CDH1-214ENST00000621016 ZNF726P1Q15940 193 aa8.93□□□□□ -0.98
CDH1-214ENST00000621016 ZNF585BQ52M93 769 aa8.93□□□□□ -0.98
CDH1-214ENST00000621016 HAPLN4Q86UW8 402 aa8.93□□□□□ -0.98
CDH1-214ENST00000621016 ZNF295-AS1Q8N0V1 137 aa8.93□□□□□ -0.98
CDH1-214ENST00000621016 LEAP2Q969E1 77 aa8.93□□□□□ -0.98
CDH1-214ENST00000621016 IGKV3D-15A0A087WSY6 115 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 C1QTNF9BB2RNN3 333 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 J3QT63 122 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 TIMM8AO60220 97 aaPredicted RBP8.92□□□□□ -0.98
CDH1-214ENST00000621016 ZG16O60844 167 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 S1PR2O95136 353 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 CRYAAP02489 173 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 C3orf79P0CE67 100 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 RHOGP84095 191 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 ZNF766Q5HY98 468 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 KLHDC1Q8N7A1 406 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 AP1S3Q96PC3 154 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 NAT8Q9UHE5 227 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 ZNF835Q9Y2P0 537 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 MPC1Q9Y5U8 109 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 SPTAN1Q13813 2472 aaKnown RBP8.92□□□□□ -0.98
CDH1-214ENST00000621016 A0A087X0K7 114 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 C17orf98A8MV24 154 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 ACP1P24666 158 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 HBG1P69891 147 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 HBG2P69892 147 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 CISD2Q8N5K1 135 aaKnown RBP8.92□□□□□ -0.98
CDH1-214ENST00000621016 ZNF439Q8NDP4 499 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 BLNKQ8WV28 456 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 RAB40CQ96S21 281 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 NPVFQ9HCQ7 196 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 ANKRD11Q6UB99 2663 aaPredicted RBP8.92□□□□□ -0.98
CDH1-214ENST00000621016 PCSK5Q92824 1860 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 IGHV3OR15-7A0A075B7D8 119 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 J3KRW8 73 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 M0R1X1 148 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 ZNF737O75373 536 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 BRI3O95415 125 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 IGLV2-14P01704 120 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 CA7P43166 264 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 NRN1LQ496H8 165 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 MORN2Q502X0 79 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms