RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 UCP3P55916 312 aa6.95□□□□□ -1.3
PTPDC1-204ENST00000620992 B3GALT5-AS1P59052 145 aa6.95□□□□□ -1.3
PTPDC1-204ENST00000620992 RPL30P62888 115 aaKnown RBP6.95□□□□□ -1.3
PTPDC1-204ENST00000620992 TMEM241Q24JQ0 296 aa6.95□□□□□ -1.3
PTPDC1-204ENST00000620992 C10orf113Q5VZT2 155 aa6.95□□□□□ -1.3
PTPDC1-204ENST00000620992 SELENOHQ8IZQ5 122 aaKnown RBP6.95□□□□□ -1.3
PTPDC1-204ENST00000620992 LYPD6BQ8NI32 183 aa6.95□□□□□ -1.3
PTPDC1-204ENST00000620992 SNX22Q96L94 193 aa6.95□□□□□ -1.3
PTPDC1-204ENST00000620992 CHRDL1Q9BU40 450 aa6.95□□□□□ -1.3
PTPDC1-204ENST00000620992 C5orf52A6NGY3 159 aa6.95□□□□□ -1.3
PTPDC1-204ENST00000620992 RND3P61587 244 aa6.95□□□□□ -1.3
PTPDC1-204ENST00000620992 TMEM42Q69YG0 159 aa6.95□□□□□ -1.3
PTPDC1-204ENST00000620992 C16orf92Q96LL3 132 aa6.95□□□□□ -1.3
PTPDC1-204ENST00000620992 ADAMTS20P59510 1910 aa6.95□□□□□ -1.3
PTPDC1-204ENST00000620992 LINC00587B1AMM8 73 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 B9A039 149 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 H3BQ15 152 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 OR5AL1P0C617 328 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 FOLR2P14207 255 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 FXYD3Q14802 87 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 RNF212Q495C1 297 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 TEPPQ6URK8 271 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 RPRMLQ8N4K4 120 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 NPIPB3Q92617 1050 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 CRIM1Q9NZV1 1036 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 WDFY4Q6ZS81 3184 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 C1QTNF9BB2RNN3 333 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 PRSS1P07477 247 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 C1QTNF9P0C862 333 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 RPL7P18124 248 aaKnown RBP6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 BMI1P35226 326 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 PTTG1IPP53801 180 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 GABRA6Q16445 453 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 CYB561D1Q8N8Q1 229 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 MRPL37Q9BZE1 423 aaKnown RBP6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 MARCH11A6NNE9 402 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 PITX3O75364 302 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 SMIM6P0DI80 62 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 PPOXP50336 477 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 TBR1Q16650 682 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 Q1RN00 199 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 ZNF343Q6P1L6 599 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 ASCL4Q6XD76 172 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 C16orf82Q7Z2V1 217 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 WFDC12Q8WWY7 111 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 IL22RA2Q969J5 263 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 DPH3Q96FX2 82 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 LYRM2Q9NU23 88 aaPredicted RBP6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 DMDP11532 3685 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 LOC389332A0A1B0GUA5 103 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 AGAP20933 346 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 Q6ZSR3 168 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 OR13A1Q8NGR1 328 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 NOL4LQ96MY1 436 aaPredicted RBP6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 MIOXQ9UGB7 285 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 TRAPPC1Q9Y5R8 145 aa6.94□□□□□ -1.3
PTPDC1-204ENST00000620992 AP4M1O00189 453 aa6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 GATA2P23769 480 aaPredicted RBP6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 Q0VFX4 171 aa6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 FAM74A4Q5TZK3 123 aa6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 SLC35E4Q6ICL7 350 aa6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 ZNF738Q8NE65 137 aa6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 NEUROG1Q92886 237 aa6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 TCEAL7Q9BRU2 100 aa6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 WDR61Q9GZS3 305 aaKnown RBP6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 GAR1Q9NY12 217 aaKnown RBP6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 C12orf77C9JDV5 145 aa6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 UBE2CO00762 179 aa6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 TMEM50AO95807 157 aa6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 IGKV1D-33P01593 117 aa6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 IGKV1-33P01594 117 aa6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 CLDN18P56856 261 aa6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 DLK1P80370 383 aa6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 DEFA6Q01524 100 aa6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 NHLH1Q02575 133 aa6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 HERPUD1Q15011 391 aa6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 SPANXN1Q5VSR9 72 aa6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 BRD3OSQ6XYD6 125 aa6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 LHFPL4Q7Z7J7 247 aa6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 CLEC7AQ9BXN2 247 aa6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 CENPEQ02224 2701 aa6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 PRRC2AP48634 2157 aaKnown RBP6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 MGAM2Q2M2H8 2515 aa6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 HYPMO75409 117 aa6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 AMTP48728 403 aa6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 HOXA4Q00056 320 aaPredicted RBP6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 IL24Q13007 206 aa6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 TMEM219Q86XT9 240 aa6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 SCRT1Q9BWW7 348 aa6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 C1QTNF5Q9BXJ0 243 aa6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 ZNF586Q9NXT0 402 aa6.93□□□□□ -1.3
PTPDC1-204ENST00000620992 PGLYRP1O75594 196 aaPredicted RBP6.92□□□□□ -1.3
PTPDC1-204ENST00000620992 SRD5A1P18405 259 aa6.92□□□□□ -1.3
PTPDC1-204ENST00000620992 DRAM1Q8N682 238 aa6.92□□□□□ -1.3
PTPDC1-204ENST00000620992 OR5AU1Q8NGC0 362 aa6.92□□□□□ -1.3
PTPDC1-204ENST00000620992 OR9G1Q8NH87 305 aa6.92□□□□□ -1.3
PTPDC1-204ENST00000620992 LURAP1Q96LR2 239 aa6.92□□□□□ -1.3
PTPDC1-204ENST00000620992 PGPA6NDG6 321 aa6.92□□□□□ -1.3
PTPDC1-204ENST00000620992 FAM181BA6NEQ2 426 aa6.92□□□□□ -1.3
PTPDC1-204ENST00000620992 TRGV3P03979 118 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms