RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 SNRPD3P62318 126 aaKnown RBP7.04□□□□□ -1.28
ALMS1-208ENST00000620466 LCN2P80188 198 aa7.04□□□□□ -1.28
ALMS1-208ENST00000620466 LBHQ53QV2 105 aaPredicted RBP7.04□□□□□ -1.28
ALMS1-208ENST00000620466 CLEC7AQ9BXN2 247 aa7.04□□□□□ -1.28
ALMS1-208ENST00000620466 PINLYPA6NC86 204 aa7.03□□□□□ -1.28
ALMS1-208ENST00000620466 TMEM250H0YL14 139 aa7.03□□□□□ -1.28
ALMS1-208ENST00000620466 J3QW42 95 aa7.03□□□□□ -1.28
ALMS1-208ENST00000620466 LHX2P50458 406 aa7.03□□□□□ -1.28
ALMS1-208ENST00000620466 ZNF146Q15072 292 aa7.03□□□□□ -1.28
ALMS1-208ENST00000620466 MMD2Q8IY49 270 aa7.03□□□□□ -1.28
ALMS1-208ENST00000620466 MAP1LC3AQ9H492 121 aa7.03□□□□□ -1.28
ALMS1-208ENST00000620466 ANAPC1Q9H1A4 1944 aa7.03□□□□□ -1.28
ALMS1-208ENST00000620466 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.03□□□□□ -1.28
ALMS1-208ENST00000620466 IGHV3-66A0A0C4DH42 116 aa7.03□□□□□ -1.28
ALMS1-208ENST00000620466 VENTXO95231 258 aa7.03□□□□□ -1.28
ALMS1-208ENST00000620466 SSBP3Q9BWW4 388 aaPredicted RBP7.03□□□□□ -1.28
ALMS1-208ENST00000620466 DEPPQ9NTK1 212 aa7.03□□□□□ -1.28
ALMS1-208ENST00000620466 A0A1W2PRX2 142 aa7.03□□□□□ -1.28
ALMS1-208ENST00000620466 ZNF324BQ6AW86 544 aaPredicted RBP7.03□□□□□ -1.28
ALMS1-208ENST00000620466 C17orf82Q86X59 251 aaPredicted RBP7.03□□□□□ -1.28
ALMS1-208ENST00000620466 OR13A1Q8NGR1 328 aa7.03□□□□□ -1.28
ALMS1-208ENST00000620466 LIPFP07098 398 aa7.03□□□□□ -1.28
ALMS1-208ENST00000620466 TSPOP30536 169 aa7.03□□□□□ -1.28
ALMS1-208ENST00000620466 PCP4P48539 62 aa7.03□□□□□ -1.28
ALMS1-208ENST00000620466 LRTM2Q8N967 370 aa7.03□□□□□ -1.28
ALMS1-208ENST00000620466 PRDM6Q9NQX0 595 aa7.03□□□□□ -1.28
ALMS1-208ENST00000620466 CBLN4Q9NTU7 201 aa7.03□□□□□ -1.28
ALMS1-208ENST00000620466 CDC42EP3Q9UKI2 254 aa7.03□□□□□ -1.28
ALMS1-208ENST00000620466 TCF20Q9UGU0 1960 aaKnown RBP7.03□□□□□ -1.28
ALMS1-208ENST00000620466 PGPA6NDG6 321 aa7.03□□□□□ -1.28
ALMS1-208ENST00000620466 FOXH1O75593 365 aa7.03□□□□□ -1.28
ALMS1-208ENST00000620466 ATP5G3P48201 142 aa7.03□□□□□ -1.28
ALMS1-208ENST00000620466 RAB9AP51151 201 aa7.03□□□□□ -1.28
ALMS1-208ENST00000620466 FAM74A4Q5TZK3 123 aa7.03□□□□□ -1.28
ALMS1-208ENST00000620466 VSIRQ9H7M9 311 aa7.03□□□□□ -1.28
ALMS1-208ENST00000620466 TRAV24A0A0B4J272 114 aa7.02□□□□□ -1.28
ALMS1-208ENST00000620466 CFPP27918 469 aa7.02□□□□□ -1.28
ALMS1-208ENST00000620466 RND2P52198 227 aa7.02□□□□□ -1.28
ALMS1-208ENST00000620466 RPS20P60866 119 aaKnown RBP7.02□□□□□ -1.28
ALMS1-208ENST00000620466 TMEM238LA0A1B0GVL6 79 aa7.02□□□□□ -1.29
ALMS1-208ENST00000620466 SCO2A0A1W2PP80 73 aa7.02□□□□□ -1.29
ALMS1-208ENST00000620466 A6NJY4 79 aa7.02□□□□□ -1.29
ALMS1-208ENST00000620466 ADCYAP1P18509 176 aa7.02□□□□□ -1.29
ALMS1-208ENST00000620466 CYP2G1PQ6ZSU1 146 aa7.02□□□□□ -1.29
ALMS1-208ENST00000620466 COPS9Q8WXC6 57 aa7.02□□□□□ -1.29
ALMS1-208ENST00000620466 NABP2Q9BQ15 211 aa7.02□□□□□ -1.29
ALMS1-208ENST00000620466 PLXNB3Q9ULL4 1909 aa7.02□□□□□ -1.29
ALMS1-208ENST00000620466 NPIPB11E5RHQ5 1161 aa7.02□□□□□ -1.29
ALMS1-208ENST00000620466 LYL1P12980 280 aa7.02□□□□□ -1.29
ALMS1-208ENST00000620466 GCSAMLQ5JQS6 135 aa7.02□□□□□ -1.29
ALMS1-208ENST00000620466 Q6ZT83 130 aa7.02□□□□□ -1.29
ALMS1-208ENST00000620466 ZNF256Q9Y2P7 627 aaPredicted RBP7.02□□□□□ -1.29
ALMS1-208ENST00000620466 B9A039 149 aa7.02□□□□□ -1.29
ALMS1-208ENST00000620466 PRSS2P07478 247 aa7.02□□□□□ -1.29
ALMS1-208ENST00000620466 IGHV1-2P23083 117 aa7.02□□□□□ -1.29
ALMS1-208ENST00000620466 CD69Q07108 199 aa7.02□□□□□ -1.29
ALMS1-208ENST00000620466 MEIG1Q5JSS6 88 aa7.02□□□□□ -1.29
ALMS1-208ENST00000620466 ZNF497Q6ZNH5 498 aa7.02□□□□□ -1.29
ALMS1-208ENST00000620466 ZNRF1Q8ND25 227 aa7.02□□□□□ -1.29
ALMS1-208ENST00000620466 WDYHV1Q96HA8 205 aa7.02□□□□□ -1.29
ALMS1-208ENST00000620466 ZNF581Q9P0T4 197 aa7.02□□□□□ -1.29
ALMS1-208ENST00000620466 RALYQ9UKM9 306 aaKnown RBP7.02□□□□□ -1.29
ALMS1-208ENST00000620466 TCF21O43680 179 aa7.02□□□□□ -1.29
ALMS1-208ENST00000620466 HLA-DQA1P01909 254 aa7.02□□□□□ -1.29
ALMS1-208ENST00000620466 C8orf88P0DMB2 117 aa7.02□□□□□ -1.29
ALMS1-208ENST00000620466 PEAR1Q5VY43 1037 aaPredicted RBP7.02□□□□□ -1.29
ALMS1-208ENST00000620466 F5P12259 2224 aa7.02□□□□□ -1.29
ALMS1-208ENST00000620466 CBLN1P23435 193 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 SRIP30626 198 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 APOBEC3AP31941 199 aaPredicted RBP7.01□□□□□ -1.29
ALMS1-208ENST00000620466 RPL23P62829 140 aaKnown RBP7.01□□□□□ -1.29
ALMS1-208ENST00000620466 KIAA1644Q3SXP7 199 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 CENPWQ5EE01 88 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 COL5A1-AS1Q5SY13 56 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 RAMP3O60896 148 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 TFF1P04155 84 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 HEPN1Q6WQI6 88 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 TMEM101Q96IK0 257 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 DNAJC4Q9NNZ3 241 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 PLXND1Q9Y4D7 1925 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 A8MWL6 223 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 TRGV3P03979 118 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 GGNQ86UU5 652 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 RFNGQ9Y644 331 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 IQCF6A8MYZ5 107 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 ID3Q02535 119 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 PSG7Q13046 419 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 TMEM177Q53S58 311 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 GATAD1Q8WUU5 269 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 NEU1Q99519 415 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 YAE1D1Q9NRH1 226 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 SPAG17Q6Q759 2223 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 TRBV9A0A0B4J1U6 114 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 ZNF729A6NN14 1252 aaPredicted RBP7.01□□□□□ -1.29
ALMS1-208ENST00000620466 SLC17A3O00476 420 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 RRHO14718 337 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 CD55P08174 381 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 NPPCP23582 126 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 ALKBH7Q9BT30 221 aaPredicted RBP7.01□□□□□ -1.29
ALMS1-208ENST00000620466 WISP1O95388 367 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms