RNA–Protein interactions for RNA: ENST00000596900.5

SPTBN4-210, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-210ENST00000596900 FAM74A1Q5RGS3 127 aa18.43■□□□□ 0.54
SPTBN4-210ENST00000596900 THNSL2Q86YJ6 484 aa18.43■□□□□ 0.54
SPTBN4-210ENST00000596900 C17orf50Q8WW18 174 aa18.43■□□□□ 0.54
SPTBN4-210ENST00000596900 GNPNAT1Q96EK6 184 aaPredicted RBP18.43■□□□□ 0.54
SPTBN4-210ENST00000596900 TPSG1Q9NRR2 321 aa18.43■□□□□ 0.54
SPTBN4-210ENST00000596900 CSMD2Q7Z408 3487 aa18.43■□□□□ 0.54
SPTBN4-210ENST00000596900 POLQO75417 2590 aa18.42■□□□□ 0.54
SPTBN4-210ENST00000596900 PMS2P5A8MQ11 134 aa18.42■□□□□ 0.54
SPTBN4-210ENST00000596900 INS-IGF2F8WCM5 200 aa18.42■□□□□ 0.54
SPTBN4-210ENST00000596900 J3QLI3 93 aa18.42■□□□□ 0.54
SPTBN4-210ENST00000596900 FAM106CPP0CH98 169 aa18.42■□□□□ 0.54
SPTBN4-210ENST00000596900 ERHP84090 104 aaKnown RBP18.42■□□□□ 0.54
SPTBN4-210ENST00000596900 EBI3Q14213 229 aa18.42■□□□□ 0.54
SPTBN4-210ENST00000596900 PIP4P2Q8N4L2 257 aa18.42■□□□□ 0.54
SPTBN4-210ENST00000596900 NPBQ8NG41 125 aa18.42■□□□□ 0.54
SPTBN4-210ENST00000596900 Q96MF0 132 aa18.42■□□□□ 0.54
SPTBN4-210ENST00000596900 PAX6P26367 422 aa18.41■□□□□ 0.54
SPTBN4-210ENST00000596900 HNF4GQ14541 408 aa18.41■□□□□ 0.54
SPTBN4-210ENST00000596900 ETV3LQ6ZN32 361 aa18.41■□□□□ 0.54
SPTBN4-210ENST00000596900 SCGB1C1Q8TD33 95 aa18.41■□□□□ 0.54
SPTBN4-210ENST00000596900 TMEM147Q9BVK8 224 aa18.41■□□□□ 0.54
SPTBN4-210ENST00000596900 FBXL15Q9H469 300 aa18.41■□□□□ 0.54
SPTBN4-210ENST00000596900 NDUFA3O95167 84 aa18.41■□□□□ 0.54
SPTBN4-210ENST00000596900 NMBP08949 121 aa18.41■□□□□ 0.54
SPTBN4-210ENST00000596900 SPP1P10451 314 aa18.41■□□□□ 0.54
SPTBN4-210ENST00000596900 SNCAP37840 140 aa18.41■□□□□ 0.54
SPTBN4-210ENST00000596900 TNXAQ16473 311 aa18.41■□□□□ 0.54
SPTBN4-210ENST00000596900 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.4■□□□□ 0.54
SPTBN4-210ENST00000596900 IFNA4P05014 189 aa18.4■□□□□ 0.54
SPTBN4-210ENST00000596900 RPL27AP46776 148 aaKnown RBP18.4■□□□□ 0.54
SPTBN4-210ENST00000596900 PJVKQ0ZLH3 352 aa18.4■□□□□ 0.54
SPTBN4-210ENST00000596900 AJUBAQ96IF1 538 aa18.4■□□□□ 0.54
SPTBN4-210ENST00000596900 PARD6GQ9BYG4 376 aaPredicted RBP18.4■□□□□ 0.54
SPTBN4-210ENST00000596900 UQCC1Q9NVA1 299 aa18.4■□□□□ 0.54
SPTBN4-210ENST00000596900 VPS13CQ709C8 3753 aa18.4■□□□□ 0.54
SPTBN4-210ENST00000596900 TMEM11P17152 192 aa18.39■□□□□ 0.54
SPTBN4-210ENST00000596900 CD24P25063 80 aa18.39■□□□□ 0.54
SPTBN4-210ENST00000596900 MRGPRG-AS1Q2M3A8 158 aa18.39■□□□□ 0.54
SPTBN4-210ENST00000596900 PCNPQ8WW12 178 aaKnown RBP18.39■□□□□ 0.54
SPTBN4-210ENST00000596900 GGACTQ9BVM4 153 aa18.39■□□□□ 0.54
SPTBN4-210ENST00000596900 APCP25054 2843 aa18.39■□□□□ 0.53
SPTBN4-210ENST00000596900 TGFAP01135 160 aa18.39■□□□□ 0.53
SPTBN4-210ENST00000596900 ATP6V0CP27449 155 aa18.39■□□□□ 0.53
SPTBN4-210ENST00000596900 COMPP49747 757 aaPredicted RBP18.39■□□□□ 0.53
SPTBN4-210ENST00000596900 SLC7A5P1Q8MH63 180 aa18.39■□□□□ 0.53
SPTBN4-210ENST00000596900 C1RLQ9NZP8 487 aa18.39■□□□□ 0.53
SPTBN4-210ENST00000596900 ATP6V1G1O75348 118 aa18.38■□□□□ 0.53
SPTBN4-210ENST00000596900 CA2P00918 260 aa18.38■□□□□ 0.53
SPTBN4-210ENST00000596900 SULT1A2P50226 295 aa18.38■□□□□ 0.53
SPTBN4-210ENST00000596900 TMEM249Q2WGJ8 235 aa18.38■□□□□ 0.53
SPTBN4-210ENST00000596900 C10orf55Q5SWW7 151 aa18.38■□□□□ 0.53
SPTBN4-210ENST00000596900 RUSC1-AS1Q66K80 236 aa18.38■□□□□ 0.53
SPTBN4-210ENST00000596900 OR10W1Q8NGF6 305 aa18.38■□□□□ 0.53
SPTBN4-210ENST00000596900 IGHV3OR16-10A0A075B7F0 116 aa18.37■□□□□ 0.53
SPTBN4-210ENST00000596900 UBE2L5PA0A1B0GUS4 154 aa18.37■□□□□ 0.53
SPTBN4-210ENST00000596900 GNB1P62873 340 aa18.37■□□□□ 0.53
SPTBN4-210ENST00000596900 LRRC75BQ2VPJ9 315 aa18.37■□□□□ 0.53
SPTBN4-210ENST00000596900 C2orf83Q53S99 150 aa18.37■□□□□ 0.53
SPTBN4-210ENST00000596900 HSD17B13Q7Z5P4 300 aaPredicted RBP18.37■□□□□ 0.53
SPTBN4-210ENST00000596900 KRTAP1-3Q8IUG1 177 aa18.37■□□□□ 0.53
SPTBN4-210ENST00000596900 Q8N6K4 173 aa18.37■□□□□ 0.53
SPTBN4-210ENST00000596900 WDR61Q9GZS3 305 aaKnown RBP18.37■□□□□ 0.53
SPTBN4-210ENST00000596900 LINC00862A6NCI5 91 aa18.37■□□□□ 0.53
SPTBN4-210ENST00000596900 SUB1P53999 127 aaKnown RBP eCLIP18.37■□□□□ 0.53
SPTBN4-210ENST00000596900 C5orf64Q2M2E5 130 aa18.37■□□□□ 0.53
SPTBN4-210ENST00000596900 VWC2Q2TAL6 325 aa18.37■□□□□ 0.53
SPTBN4-210ENST00000596900 BSXQ3C1V8 233 aa18.37■□□□□ 0.53
SPTBN4-210ENST00000596900 MAPK1IP1LQ8NDC0 245 aa18.37■□□□□ 0.53
SPTBN4-210ENST00000596900 SH3BGRL3Q9H299 93 aa18.37■□□□□ 0.53
SPTBN4-210ENST00000596900 CGB1A6NKQ9 187 aa18.36■□□□□ 0.53
SPTBN4-210ENST00000596900 NCBP2LA6PVI3 153 aaKnown RBP18.36■□□□□ 0.53
SPTBN4-210ENST00000596900 E7EUB6 86 aa18.36■□□□□ 0.53
SPTBN4-210ENST00000596900 FGF16O43320 207 aa18.36■□□□□ 0.53
SPTBN4-210ENST00000596900 IGHV4-31P0DP07 118 aa18.36■□□□□ 0.53
SPTBN4-210ENST00000596900 IGHV4-38-2P0DP08 117 aa18.36■□□□□ 0.53
SPTBN4-210ENST00000596900 RAB5CP51148 216 aa18.36■□□□□ 0.53
SPTBN4-210ENST00000596900 DLK1P80370 383 aa18.36■□□□□ 0.53
SPTBN4-210ENST00000596900 BRD3OSQ6XYD6 125 aa18.36■□□□□ 0.53
SPTBN4-210ENST00000596900 OR2G3Q8NGZ4 309 aa18.36■□□□□ 0.53
SPTBN4-210ENST00000596900 FAM96BQ9Y3D0 163 aa18.36■□□□□ 0.53
SPTBN4-210ENST00000596900 CR1P17927 2039 aa18.35■□□□□ 0.53
SPTBN4-210ENST00000596900 TMEM170AQ8WVE7 144 aa18.35■□□□□ 0.53
SPTBN4-210ENST00000596900 SAT2Q96F10 170 aaPredicted RBP18.35■□□□□ 0.53
SPTBN4-210ENST00000596900 ZNF705EA8MWA4 302 aaPredicted RBP18.35■□□□□ 0.53
SPTBN4-210ENST00000596900 UMAD1C9J7I0 102 aa18.35■□□□□ 0.53
SPTBN4-210ENST00000596900 CNIH1O95406 144 aa18.35■□□□□ 0.53
SPTBN4-210ENST00000596900 FAM157CP0CG43 387 aa18.35■□□□□ 0.53
SPTBN4-210ENST00000596900 RNASE2P10153 161 aaKnown RBP18.35■□□□□ 0.53
SPTBN4-210ENST00000596900 BPIFB3P59826 476 aa18.35■□□□□ 0.53
SPTBN4-210ENST00000596900 SRSF12Q8WXF0 261 aaKnown RBP18.35■□□□□ 0.53
SPTBN4-210ENST00000596900 TAF15Q92804 592 aaKnown RBP eCLIP18.35■□□□□ 0.53
SPTBN4-210ENST00000596900 SRSF8Q9BRL6 282 aaKnown RBP18.35■□□□□ 0.53
SPTBN4-210ENST00000596900 MEGF9Q9H1U4 602 aa18.35■□□□□ 0.53
SPTBN4-210ENST00000596900 PRSS46E5RG02 174 aa18.34■□□□□ 0.53
SPTBN4-210ENST00000596900 OR13C7P0DN81 318 aa18.34■□□□□ 0.53
SPTBN4-210ENST00000596900 RUNX1Q01196 453 aa18.34■□□□□ 0.53
SPTBN4-210ENST00000596900 WT1-ASQ06250 92 aa18.34■□□□□ 0.53
SPTBN4-210ENST00000596900 PSMG3Q9BT73 122 aaPredicted RBP18.34■□□□□ 0.53
SPTBN4-210ENST00000596900 PFDN2Q9UHV9 154 aa18.34■□□□□ 0.53
SPTBN4-210ENST00000596900 FBP1P09467 338 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms