RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 CT45A5P0DMU8 189 aa8.12□□□□□ -1.11
VPS25-202ENST00000589219 CT45A7P0DMV0 189 aa8.12□□□□□ -1.11
VPS25-202ENST00000589219 CCL3L1P16619 93 aa8.12□□□□□ -1.11
VPS25-202ENST00000589219 OPRK1P41145 380 aa8.12□□□□□ -1.11
VPS25-202ENST00000589219 CDC34P49427 236 aaPredicted RBP8.12□□□□□ -1.11
VPS25-202ENST00000589219 PSMB3P49720 205 aa8.12□□□□□ -1.11
VPS25-202ENST00000589219 RAB13P51153 203 aa8.12□□□□□ -1.11
VPS25-202ENST00000589219 RAB5BP61020 215 aa8.12□□□□□ -1.11
VPS25-202ENST00000589219 ZNF672Q499Z4 452 aaPredicted RBP8.12□□□□□ -1.11
VPS25-202ENST00000589219 TMEM177Q53S58 311 aa8.12□□□□□ -1.11
VPS25-202ENST00000589219 UTF1Q5T230 341 aa8.12□□□□□ -1.11
VPS25-202ENST00000589219 TMEM200BQ69YZ2 307 aa8.12□□□□□ -1.11
VPS25-202ENST00000589219 VKORC1L1Q8N0U8 176 aa8.12□□□□□ -1.11
VPS25-202ENST00000589219 RPP25LQ8N5L8 163 aaKnown RBP8.12□□□□□ -1.11
VPS25-202ENST00000589219 OR5B3Q8NH48 314 aa8.12□□□□□ -1.11
VPS25-202ENST00000589219 VSTM2AQ8TAG5 236 aa8.12□□□□□ -1.11
VPS25-202ENST00000589219 NRGNQ92686 78 aa8.12□□□□□ -1.11
VPS25-202ENST00000589219 TNFRSF14Q92956 283 aa8.12□□□□□ -1.11
VPS25-202ENST00000589219 HIST1H2BAQ96A08 127 aa8.12□□□□□ -1.11
VPS25-202ENST00000589219 TMEM186Q96B77 213 aa8.12□□□□□ -1.11
VPS25-202ENST00000589219 MRPL20Q9BYC9 149 aaKnown RBP8.12□□□□□ -1.11
VPS25-202ENST00000589219 SLC25A22Q9H936 323 aa8.12□□□□□ -1.11
VPS25-202ENST00000589219 PLEKHA3Q9HB20 300 aa8.12□□□□□ -1.11
VPS25-202ENST00000589219 SIRT7Q9NRC8 400 aa8.12□□□□□ -1.11
VPS25-202ENST00000589219 CTSZQ9UBR2 303 aa8.12□□□□□ -1.11
VPS25-202ENST00000589219 OR51B2Q9Y5P1 312 aa8.12□□□□□ -1.11
VPS25-202ENST00000589219 PUS1Q9Y606 427 aaKnown RBP eCLIP8.12□□□□□ -1.11
VPS25-202ENST00000589219 ABCA4P78363 2273 aa8.12□□□□□ -1.11
VPS25-202ENST00000589219 PRRC2AP48634 2157 aaKnown RBP8.11□□□□□ -1.11
VPS25-202ENST00000589219 HEATR1Q9H583 2144 aaKnown RBP8.11□□□□□ -1.11
VPS25-202ENST00000589219 TRAV3A0A0B4J244 114 aa8.11□□□□□ -1.11
VPS25-202ENST00000589219 A0A1W2PPH5 198 aa8.11□□□□□ -1.11
VPS25-202ENST00000589219 SMCO3A2RU48 225 aa8.11□□□□□ -1.11
VPS25-202ENST00000589219 H0YJW9 148 aa8.11□□□□□ -1.11
VPS25-202ENST00000589219 TMEM250H0YL14 139 aa8.11□□□□□ -1.11
VPS25-202ENST00000589219 KBTBD11O94819 623 aa8.11□□□□□ -1.11
VPS25-202ENST00000589219 IGKV1D-33P01593 117 aa8.11□□□□□ -1.11
VPS25-202ENST00000589219 IGKV1-33P01594 117 aa8.11□□□□□ -1.11
VPS25-202ENST00000589219 RBP4P02753 201 aa8.11□□□□□ -1.11
VPS25-202ENST00000589219 IFNA4P05014 189 aa8.11□□□□□ -1.11
VPS25-202ENST00000589219 MAS1LP35410 378 aa8.11□□□□□ -1.11
VPS25-202ENST00000589219 FGF8P55075 233 aaPredicted RBP8.11□□□□□ -1.11
VPS25-202ENST00000589219 DLX6P56179 175 aa8.11□□□□□ -1.11
VPS25-202ENST00000589219 FAM90A2PQ658T7 463 aa8.11□□□□□ -1.11
VPS25-202ENST00000589219 ZCCHC24Q8N2G6 241 aaKnown RBP8.11□□□□□ -1.11
VPS25-202ENST00000589219 MUC15Q8N387 334 aa8.11□□□□□ -1.11
VPS25-202ENST00000589219 OR5AN1Q8NGI8 311 aa8.11□□□□□ -1.11
VPS25-202ENST00000589219 OR10X1Q8NGY0 326 aa8.11□□□□□ -1.11
VPS25-202ENST00000589219 OR9G1Q8NH87 305 aa8.11□□□□□ -1.11
VPS25-202ENST00000589219 NEUROG1Q92886 237 aa8.11□□□□□ -1.11
VPS25-202ENST00000589219 MBD6Q96DN6 1003 aa8.11□□□□□ -1.11
VPS25-202ENST00000589219 HARBI1Q96MB7 349 aa8.11□□□□□ -1.11
VPS25-202ENST00000589219 TMEM204Q9BSN7 226 aa8.11□□□□□ -1.11
VPS25-202ENST00000589219 C20orf24Q9BUV8 137 aa8.11□□□□□ -1.11
VPS25-202ENST00000589219 TMUB1Q9BVT8 246 aa8.11□□□□□ -1.11
VPS25-202ENST00000589219 GGTLC1Q9BX51 225 aa8.11□□□□□ -1.11
VPS25-202ENST00000589219 PRELID1Q9Y255 219 aa8.11□□□□□ -1.11
VPS25-202ENST00000589219 HRNRQ86YZ3 2850 aaPredicted RBP8.11□□□□□ -1.11
VPS25-202ENST00000589219 KIAA2026Q5HYC2 2103 aa8.11□□□□□ -1.11
VPS25-202ENST00000589219 MTORP42345 2549 aa8.1□□□□□ -1.11
VPS25-202ENST00000589219 ZFHX3Q15911 3703 aa8.1□□□□□ -1.11
VPS25-202ENST00000589219 PRR14LQ5THK1 2151 aa8.1□□□□□ -1.11
VPS25-202ENST00000589219 A0A1W2PN81 502 aa8.1□□□□□ -1.11
VPS25-202ENST00000589219 CXorf65A6NEN9 183 aa8.1□□□□□ -1.11
VPS25-202ENST00000589219 C1orf196B1AJZ1 125 aa8.1□□□□□ -1.11
VPS25-202ENST00000589219 INS-IGF2F8WCM5 200 aa8.1□□□□□ -1.11
VPS25-202ENST00000589219 J3QR06 171 aa8.1□□□□□ -1.11
VPS25-202ENST00000589219 RRHO14718 337 aa8.1□□□□□ -1.11
VPS25-202ENST00000589219 FCN3O75636 299 aa8.1□□□□□ -1.11
VPS25-202ENST00000589219 CRYBA1P05813 215 aa8.1□□□□□ -1.11
VPS25-202ENST00000589219 SAA1P0DJI8 122 aaPredicted RBP8.1□□□□□ -1.11
VPS25-202ENST00000589219 USF1P22415 310 aaPredicted RBP8.1□□□□□ -1.11
VPS25-202ENST00000589219 CHRNA7P36544 502 aa8.1□□□□□ -1.11
VPS25-202ENST00000589219 CEBPGP53567 150 aa8.1□□□□□ -1.11
VPS25-202ENST00000589219 MEF2BQ02080 365 aaPredicted RBP8.1□□□□□ -1.11
VPS25-202ENST00000589219 RAB31Q13636 194 aa8.1□□□□□ -1.11
VPS25-202ENST00000589219 KRTAP21-3Q3LHN1 58 aa8.1□□□□□ -1.11
VPS25-202ENST00000589219 LYPD2Q6UXB3 125 aa8.1□□□□□ -1.11
VPS25-202ENST00000589219 TREML4Q6UXN2 200 aa8.1□□□□□ -1.11
VPS25-202ENST00000589219 Q8N7P7 452 aa8.1□□□□□ -1.11
VPS25-202ENST00000589219 RAB24Q969Q5 203 aa8.1□□□□□ -1.11
VPS25-202ENST00000589219 MALSU1Q96EH3 234 aa8.1□□□□□ -1.11
VPS25-202ENST00000589219 NABP2Q9BQ15 211 aa8.1□□□□□ -1.11
VPS25-202ENST00000589219 NPVFQ9HCQ7 196 aa8.1□□□□□ -1.11
VPS25-202ENST00000589219 BIN3Q9NQY0 253 aa8.1□□□□□ -1.11
VPS25-202ENST00000589219 WASHC3Q9Y3C0 194 aa8.1□□□□□ -1.11
VPS25-202ENST00000589219 LSM4Q9Y4Z0 139 aaKnown RBP8.1□□□□□ -1.11
VPS25-202ENST00000589219 PXMP4Q9Y6I8 212 aa8.1□□□□□ -1.11
VPS25-202ENST00000589219 DYSFO75923 2080 aa8.09□□□□□ -1.11
VPS25-202ENST00000589219 NF1P21359 2839 aa8.09□□□□□ -1.11
VPS25-202ENST00000589219 A0A1W2PPE2 198 aa8.09□□□□□ -1.11
VPS25-202ENST00000589219 OR2C1O95371 312 aa8.09□□□□□ -1.11
VPS25-202ENST00000589219 CA2P00918 260 aa8.09□□□□□ -1.11
VPS25-202ENST00000589219 IGHV2-70P01814 119 aa8.09□□□□□ -1.11
VPS25-202ENST00000589219 IGHV1-8P0DP01 117 aa8.09□□□□□ -1.11
VPS25-202ENST00000589219 FOSL1P15407 271 aa8.09□□□□□ -1.11
VPS25-202ENST00000589219 AKR1C3P42330 323 aa8.09□□□□□ -1.11
VPS25-202ENST00000589219 RPS16P62249 146 aaKnown RBP8.09□□□□□ -1.11
VPS25-202ENST00000589219 VMA21Q3ZAQ7 101 aa8.09□□□□□ -1.11
VPS25-202ENST00000589219 C2orf83Q53S99 150 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms