RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 FNDC10F2Z333 226 aa18.39■□□□□ 0.53
CCDC47-204ENST00000582252 SRP19P09132 144 aaKnown RBP18.39■□□□□ 0.53
CCDC47-204ENST00000582252 BCL2P10415 239 aa18.39■□□□□ 0.53
CCDC47-204ENST00000582252 RBMS3Q6XE24 437 aaKnown RBP18.39■□□□□ 0.53
CCDC47-204ENST00000582252 RXFP4Q8TDU9 374 aa18.39■□□□□ 0.53
CCDC47-204ENST00000582252 C17orf50Q8WW18 174 aa18.39■□□□□ 0.53
CCDC47-204ENST00000582252 COMMD5Q9GZQ3 224 aa18.39■□□□□ 0.53
CCDC47-204ENST00000582252 IGHV2-26A0A0B4J1V2 119 aa18.38■□□□□ 0.53
CCDC47-204ENST00000582252 TEX50A0A1B0GTY4 177 aa18.38■□□□□ 0.53
CCDC47-204ENST00000582252 RPP25LQ8N5L8 163 aaKnown RBP18.38■□□□□ 0.53
CCDC47-204ENST00000582252 BEND2Q8NDZ0 799 aa18.38■□□□□ 0.53
CCDC47-204ENST00000582252 CHODLQ9H9P2 273 aa18.38■□□□□ 0.53
CCDC47-204ENST00000582252 M0R036 132 aa18.37■□□□□ 0.53
CCDC47-204ENST00000582252 LIPFP07098 398 aa18.37■□□□□ 0.53
CCDC47-204ENST00000582252 OPRK1P41145 380 aa18.37■□□□□ 0.53
CCDC47-204ENST00000582252 RPL8P62917 257 aaKnown RBP18.37■□□□□ 0.53
CCDC47-204ENST00000582252 RHEBQ15382 184 aa18.37■□□□□ 0.53
CCDC47-204ENST00000582252 HLA-DRB5Q30154 266 aa18.37■□□□□ 0.53
CCDC47-204ENST00000582252 VMA21Q3ZAQ7 101 aa18.37■□□□□ 0.53
CCDC47-204ENST00000582252 TMEM88Q6PEY1 159 aa18.37■□□□□ 0.53
CCDC47-204ENST00000582252 OR1L8Q8NGR8 309 aa18.37■□□□□ 0.53
CCDC47-204ENST00000582252 TMEM167AQ8TBQ9 72 aa18.37■□□□□ 0.53
CCDC47-204ENST00000582252 P2RX4Q99571 388 aa18.37■□□□□ 0.53
CCDC47-204ENST00000582252 ZFP92A6NM28 416 aa18.37■□□□□ 0.53
CCDC47-204ENST00000582252 CA2P00918 260 aa18.37■□□□□ 0.53
CCDC47-204ENST00000582252 ATF4P18848 351 aaPredicted RBP18.37■□□□□ 0.53
CCDC47-204ENST00000582252 RAB31Q13636 194 aa18.37■□□□□ 0.53
CCDC47-204ENST00000582252 HNF4GQ14541 408 aa18.37■□□□□ 0.53
CCDC47-204ENST00000582252 TREML4Q6UXN2 200 aa18.37■□□□□ 0.53
CCDC47-204ENST00000582252 SMCO4Q9NRQ5 59 aa18.37■□□□□ 0.53
CCDC47-204ENST00000582252 A0A1W2PN81 502 aa18.36■□□□□ 0.53
CCDC47-204ENST00000582252 IGKV1D-33P01593 117 aa18.36■□□□□ 0.53
CCDC47-204ENST00000582252 IGKV1-33P01594 117 aa18.36■□□□□ 0.53
CCDC47-204ENST00000582252 CHRNA7P36544 502 aa18.36■□□□□ 0.53
CCDC47-204ENST00000582252 LGALS7P47929 136 aa18.36■□□□□ 0.53
CCDC47-204ENST00000582252 FGF8P55075 233 aaPredicted RBP18.36■□□□□ 0.53
CCDC47-204ENST00000582252 AWAT1Q58HT5 328 aa18.36■□□□□ 0.53
CCDC47-204ENST00000582252 SSX7Q7RTT5 188 aa18.36■□□□□ 0.53
CCDC47-204ENST00000582252 CBLN2Q8IUK8 224 aa18.36■□□□□ 0.53
CCDC47-204ENST00000582252 TMEM170AQ8WVE7 144 aa18.36■□□□□ 0.53
CCDC47-204ENST00000582252 VAX2Q9UIW0 290 aa18.36■□□□□ 0.53
CCDC47-204ENST00000582252 SPG11Q96JI7 2443 aa18.35■□□□□ 0.53
CCDC47-204ENST00000582252 CRYBG3Q68DQ2 2970 aa18.35■□□□□ 0.53
CCDC47-204ENST00000582252 INS-IGF2F8WCM5 200 aa18.35■□□□□ 0.53
CCDC47-204ENST00000582252 IGLV1-47P01700 117 aa18.35■□□□□ 0.53
CCDC47-204ENST00000582252 ERHP84090 104 aaKnown RBP18.35■□□□□ 0.53
CCDC47-204ENST00000582252 C2orf83Q53S99 150 aa18.35■□□□□ 0.53
CCDC47-204ENST00000582252 FAM122CQ6P4D5 195 aa18.35■□□□□ 0.53
CCDC47-204ENST00000582252 LY6G5BQ8NDX9 201 aa18.35■□□□□ 0.53
CCDC47-204ENST00000582252 SLC25A22Q9H936 323 aa18.35■□□□□ 0.53
CCDC47-204ENST00000582252 RPS10P5Q9NQ39 176 aa18.35■□□□□ 0.53
CCDC47-204ENST00000582252 CENPEQ02224 2701 aa18.35■□□□□ 0.53
CCDC47-204ENST00000582252 TEPPQ6URK8 271 aa18.35■□□□□ 0.53
CCDC47-204ENST00000582252 PATZ1Q9HBE1 687 aaKnown RBP18.35■□□□□ 0.53
CCDC47-204ENST00000582252 MANBALQ9NQG1 85 aa18.35■□□□□ 0.53
CCDC47-204ENST00000582252 MYOD1P15172 320 aa18.34■□□□□ 0.53
CCDC47-204ENST00000582252 CDC34P49427 236 aaPredicted RBP18.34■□□□□ 0.53
CCDC47-204ENST00000582252 DIAPH2-AS1Q14236 149 aa18.34■□□□□ 0.53
CCDC47-204ENST00000582252 AKIRIN2Q53H80 203 aa18.34■□□□□ 0.53
CCDC47-204ENST00000582252 NDUFA4L2Q9NRX3 87 aa18.34■□□□□ 0.53
CCDC47-204ENST00000582252 ONECUT1Q9UBC0 465 aa18.34■□□□□ 0.53
CCDC47-204ENST00000582252 NDUFS6O75380 124 aaKnown RBP18.33■□□□□ 0.52
CCDC47-204ENST00000582252 SNRNP70P08621 437 aaKnown RBP18.33■□□□□ 0.52
CCDC47-204ENST00000582252 CYB561D1Q8N8Q1 229 aa18.33■□□□□ 0.52
CCDC47-204ENST00000582252 C7orf77A4D0Y5 90 aa18.32■□□□□ 0.52
CCDC47-204ENST00000582252 SEC14L6B5MCN3 397 aa18.32■□□□□ 0.52
CCDC47-204ENST00000582252 BUB1B-PAK6H3BSN5 160 aa18.32■□□□□ 0.52
CCDC47-204ENST00000582252 CEBPGP53567 150 aa18.32■□□□□ 0.52
CCDC47-204ENST00000582252 MRPL41Q8IXM3 137 aaKnown RBP18.32■□□□□ 0.52
CCDC47-204ENST00000582252 Q8N7P7 452 aa18.32■□□□□ 0.52
CCDC47-204ENST00000582252 RAB24Q969Q5 203 aa18.32■□□□□ 0.52
CCDC47-204ENST00000582252 MGST2Q99735 147 aa18.32■□□□□ 0.52
CCDC47-204ENST00000582252 NIPSNAP3BQ9BS92 247 aa18.32■□□□□ 0.52
CCDC47-204ENST00000582252 GGTLC1Q9BX51 225 aa18.32■□□□□ 0.52
CCDC47-204ENST00000582252 LSM4Q9Y4Z0 139 aaKnown RBP18.32■□□□□ 0.52
CCDC47-204ENST00000582252 INSIG2Q9Y5U4 225 aa18.32■□□□□ 0.52
CCDC47-204ENST00000582252 PUS1Q9Y606 427 aaKnown RBP eCLIP18.32■□□□□ 0.52
CCDC47-204ENST00000582252 A0A1W2PPV4 95 aa18.32■□□□□ 0.52
CCDC47-204ENST00000582252 ENSAO43768 121 aaKnown RBP18.32■□□□□ 0.52
CCDC47-204ENST00000582252 OPN1MWP04001 364 aa18.32■□□□□ 0.52
CCDC47-204ENST00000582252 OPN1MW2P0DN77 364 aa18.32■□□□□ 0.52
CCDC47-204ENST00000582252 OPN1MW3P0DN78 364 aa18.32■□□□□ 0.52
CCDC47-204ENST00000582252 PSMB3P49720 205 aa18.32■□□□□ 0.52
CCDC47-204ENST00000582252 BSXQ3C1V8 233 aa18.32■□□□□ 0.52
CCDC47-204ENST00000582252 SSBP3Q9BWW4 388 aaPredicted RBP18.32■□□□□ 0.52
CCDC47-204ENST00000582252 PXMP4Q9Y6I8 212 aa18.32■□□□□ 0.52
CCDC47-204ENST00000582252 M0R1W7 72 aa18.31■□□□□ 0.52
CCDC47-204ENST00000582252 LY6HO94772 140 aa18.31■□□□□ 0.52
CCDC47-204ENST00000582252 IGLV2-23P01705 113 aa18.31■□□□□ 0.52
CCDC47-204ENST00000582252 PAX6P26367 422 aa18.31■□□□□ 0.52
CCDC47-204ENST00000582252 ARSJQ5FYB0 599 aaPredicted RBP18.31■□□□□ 0.52
CCDC47-204ENST00000582252 TEX45Q8NA69 505 aa18.31■□□□□ 0.52
CCDC47-204ENST00000582252 TACC2O95359 2948 aa18.3■□□□□ 0.52
CCDC47-204ENST00000582252 GPR6P46095 362 aaPredicted RBP18.3■□□□□ 0.52
CCDC47-204ENST00000582252 SUB1P53999 127 aaKnown RBP eCLIP18.3■□□□□ 0.52
CCDC47-204ENST00000582252 TMEM249Q2WGJ8 235 aa18.3■□□□□ 0.52
CCDC47-204ENST00000582252 C15orf54Q8N8G6 183 aa18.3■□□□□ 0.52
CCDC47-204ENST00000582252 RPEQ96AT9 228 aa18.3■□□□□ 0.52
CCDC47-204ENST00000582252 TUBA4BQ9H853 241 aa18.3■□□□□ 0.52
CCDC47-204ENST00000582252 PTPN13Q12923 2485 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms