RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 FBLN7Q53RD9 439 aa11.91□□□□□ -0.5
CDK5RAP3-218ENST00000580391 BTNL8Q6UX41 500 aa11.91□□□□□ -0.5
CDK5RAP3-218ENST00000580391 FAM213BQ8TBF2 198 aa11.91□□□□□ -0.5
CDK5RAP3-218ENST00000580391 TAF15Q92804 592 aaKnown RBP eCLIP11.91□□□□□ -0.5
CDK5RAP3-218ENST00000580391 PARD6GQ9BYG4 376 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-218ENST00000580391 NDUFA4L2Q9NRX3 87 aa11.91□□□□□ -0.5
CDK5RAP3-218ENST00000580391 POLR3KQ9Y2Y1 108 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-218ENST00000580391 A0A1B0GW64 132 aa11.9□□□□□ -0.5
CDK5RAP3-218ENST00000580391 CRYGBP07316 175 aa11.9□□□□□ -0.5
CDK5RAP3-218ENST00000580391 PAX1P15863 534 aa11.9□□□□□ -0.5
CDK5RAP3-218ENST00000580391 RAB5CP51148 216 aa11.9□□□□□ -0.5
CDK5RAP3-218ENST00000580391 EIF4E3Q8N5X7 224 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-218ENST00000580391 OR1L8Q8NGR8 309 aa11.9□□□□□ -0.5
CDK5RAP3-218ENST00000580391 IFNA4P05014 189 aa11.9□□□□□ -0.5
CDK5RAP3-218ENST00000580391 FGF7P21781 194 aa11.9□□□□□ -0.5
CDK5RAP3-218ENST00000580391 CD24P25063 80 aa11.9□□□□□ -0.5
CDK5RAP3-218ENST00000580391 RAB11AP62491 216 aa11.9□□□□□ -0.5
CDK5RAP3-218ENST00000580391 HABP2Q14520 560 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP3-218ENST00000580391 TEX45Q8NA69 505 aa11.9□□□□□ -0.5
CDK5RAP3-218ENST00000580391 MARC2Q969Z3 335 aa11.9□□□□□ -0.5
CDK5RAP3-218ENST00000580391 METTL1Q9UBP6 276 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-218ENST00000580391 SIGLEC9Q9Y336 463 aa11.9□□□□□ -0.5
CDK5RAP3-218ENST00000580391 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.89□□□□□ -0.513e-7■■■□□ 15.6
CDK5RAP3-218ENST00000580391 NBPF19A0A087WUL8 3843 aa11.89□□□□□ -0.51
CDK5RAP3-218ENST00000580391 UMAD1C9J7I0 102 aa11.89□□□□□ -0.51
CDK5RAP3-218ENST00000580391 SCAF4O95104 1147 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-218ENST00000580391 IGKV1D-33P01593 117 aa11.89□□□□□ -0.51
CDK5RAP3-218ENST00000580391 IGKV1-33P01594 117 aa11.89□□□□□ -0.51
CDK5RAP3-218ENST00000580391 CD1BP29016 333 aa11.89□□□□□ -0.51
CDK5RAP3-218ENST00000580391 F2RL1P55085 397 aa11.89□□□□□ -0.51
CDK5RAP3-218ENST00000580391 AKR1C8PQ5T2L2 129 aa11.89□□□□□ -0.51
CDK5RAP3-218ENST00000580391 PSMG3Q9BT73 122 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-218ENST00000580391 FBXL15Q9H469 300 aa11.89□□□□□ -0.51
CDK5RAP3-218ENST00000580391 VSIRQ9H7M9 311 aa11.89□□□□□ -0.51
CDK5RAP3-218ENST00000580391 CELSR1Q9NYQ6 3014 aa11.89□□□□□ -0.51
CDK5RAP3-218ENST00000580391 SMCO3A2RU48 225 aa11.88□□□□□ -0.51
CDK5RAP3-218ENST00000580391 TRIM77I1YAP6 450 aa11.88□□□□□ -0.51
CDK5RAP3-218ENST00000580391 UBE2E1P51965 193 aa11.88□□□□□ -0.51
CDK5RAP3-218ENST00000580391 LGALS4P56470 323 aa11.88□□□□□ -0.51
CDK5RAP3-218ENST00000580391 PRSS8Q16651 343 aa11.88□□□□□ -0.51
CDK5RAP3-218ENST00000580391 TUSC1Q2TAM9 212 aa11.88□□□□□ -0.51
CDK5RAP3-218ENST00000580391 BSXQ3C1V8 233 aa11.88□□□□□ -0.51
CDK5RAP3-218ENST00000580391 MINOS1Q5TGZ0 78 aa11.88□□□□□ -0.51
CDK5RAP3-218ENST00000580391 LYPD6BQ8NI32 183 aa11.88□□□□□ -0.51
CDK5RAP3-218ENST00000580391 LINC00052Q96N35 136 aa11.88□□□□□ -0.51
CDK5RAP3-218ENST00000580391 MINOS1-NBL1R4GNA1 71 aa11.88□□□□□ -0.51
CDK5RAP3-218ENST00000580391 A0A1B0GV50 99 aa11.88□□□□□ -0.51
CDK5RAP3-218ENST00000580391 J3QKU1 62 aa11.88□□□□□ -0.51
CDK5RAP3-218ENST00000580391 AGPAT2O15120 278 aa11.88□□□□□ -0.51
CDK5RAP3-218ENST00000580391 RNASE2P10153 161 aaKnown RBP11.88□□□□□ -0.51
CDK5RAP3-218ENST00000580391 MDKP21741 143 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-218ENST00000580391 ELLP55199 621 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-218ENST00000580391 WT1-ASQ06250 92 aa11.88□□□□□ -0.51
CDK5RAP3-218ENST00000580391 MMDQ15546 238 aa11.88□□□□□ -0.51
CDK5RAP3-218ENST00000580391 TNXAQ16473 311 aa11.88□□□□□ -0.51
CDK5RAP3-218ENST00000580391 CLEC12BQ2HXU8 276 aa11.88□□□□□ -0.51
CDK5RAP3-218ENST00000580391 IL34Q6ZMJ4 242 aa11.88□□□□□ -0.51
CDK5RAP3-218ENST00000580391 MMD2Q8IY49 270 aa11.88□□□□□ -0.51
CDK5RAP3-218ENST00000580391 NPCDR1Q9BY65 106 aa11.88□□□□□ -0.51
CDK5RAP3-218ENST00000580391 RAB19A4D1S5 217 aa11.87□□□□□ -0.51
CDK5RAP3-218ENST00000580391 SNRNP70P08621 437 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-218ENST00000580391 DLK1P80370 383 aa11.87□□□□□ -0.51
CDK5RAP3-218ENST00000580391 SRSF3P84103 164 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-218ENST00000580391 AKR1C1Q04828 323 aa11.87□□□□□ -0.51
CDK5RAP3-218ENST00000580391 PAX8Q06710 450 aa11.87□□□□□ -0.51
CDK5RAP3-218ENST00000580391 PPP1R27Q86WC6 154 aa11.87□□□□□ -0.51
CDK5RAP3-218ENST00000580391 AJUBAQ96IF1 538 aa11.87□□□□□ -0.51
CDK5RAP3-218ENST00000580391 WDR83OSQ9Y284 106 aa11.87□□□□□ -0.51
CDK5RAP3-218ENST00000580391 TBL2Q9Y4P3 447 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-218ENST00000580391 A0A1W2PN81 502 aa11.87□□□□□ -0.51
CDK5RAP3-218ENST00000580391 SAA4P35542 130 aa11.87□□□□□ -0.51
CDK5RAP3-218ENST00000580391 CHRNA7P36544 502 aa11.87□□□□□ -0.51
CDK5RAP3-218ENST00000580391 DSCR9P59020 149 aa11.87□□□□□ -0.51
CDK5RAP3-218ENST00000580391 GNB1P62873 340 aa11.87□□□□□ -0.51
CDK5RAP3-218ENST00000580391 SSBP2P81877 361 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-218ENST00000580391 ARSJQ5FYB0 599 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-218ENST00000580391 CCDC144NLQ6NUI1 221 aa11.87□□□□□ -0.51
CDK5RAP3-218ENST00000580391 ACSM6Q6P461 480 aa11.87□□□□□ -0.51
CDK5RAP3-218ENST00000580391 EAF1Q96JC9 268 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-218ENST00000580391 RNF5Q99942 180 aa11.87□□□□□ -0.51
CDK5RAP3-218ENST00000580391 TMEM231Q9H6L2 316 aa11.87□□□□□ -0.51
CDK5RAP3-218ENST00000580391 TIMM9Q9Y5J7 89 aa11.87□□□□□ -0.51
CDK5RAP3-218ENST00000580391 HELZ2Q9BYK8 2649 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-218ENST00000580391 CSMD1Q96PZ7 3565 aa11.86□□□□□ -0.51
CDK5RAP3-218ENST00000580391 OOSP1A8MZH6 123 aa11.86□□□□□ -0.51
CDK5RAP3-218ENST00000580391 INS-IGF2F8WCM5 200 aa11.86□□□□□ -0.51
CDK5RAP3-218ENST00000580391 TSPAN15O95858 294 aa11.86□□□□□ -0.51
CDK5RAP3-218ENST00000580391 ZP3P21754 424 aa11.86□□□□□ -0.51
CDK5RAP3-218ENST00000580391 SNCAP37840 140 aa11.86□□□□□ -0.51
CDK5RAP3-218ENST00000580391 RPL27AP46776 148 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-218ENST00000580391 HES1Q14469 280 aa11.86□□□□□ -0.51
CDK5RAP3-218ENST00000580391 C2orf83Q53S99 150 aa11.86□□□□□ -0.51
CDK5RAP3-218ENST00000580391 TREML4Q6UXN2 200 aa11.86□□□□□ -0.51
CDK5RAP3-218ENST00000580391 GGACTQ9BVM4 153 aa11.86□□□□□ -0.51
CDK5RAP3-218ENST00000580391 RPRMQ9NS64 109 aa11.86□□□□□ -0.51
CDK5RAP3-218ENST00000580391 APCP25054 2843 aa11.86□□□□□ -0.51
CDK5RAP3-218ENST00000580391 CR1P17927 2039 aa11.86□□□□□ -0.51
CDK5RAP3-218ENST00000580391 CENPVL3A0A0U1RRI6 287 aa11.85□□□□□ -0.51
CDK5RAP3-218ENST00000580391 NUDT19A8MXV4 375 aa11.85□□□□□ -0.51
CDK5RAP3-218ENST00000580391 FCN1O00602 326 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms