RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 FAM208BQ5VWN6 2430 aa13.74□□□□□ -0.21
HDDC3-206ENST00000561036 TRAV20A0A0B4J274 112 aa13.73□□□□□ -0.21
HDDC3-206ENST00000561036 UBE2L5PA0A1B0GUS4 154 aa13.73□□□□□ -0.21
HDDC3-206ENST00000561036 A0A1W2PRD5 423 aa13.73□□□□□ -0.21
HDDC3-206ENST00000561036 A0A1W2PRF3 423 aa13.73□□□□□ -0.21
HDDC3-206ENST00000561036 A0A1W2PRM7 423 aa13.73□□□□□ -0.21
HDDC3-206ENST00000561036 RAB19A4D1S5 217 aa13.73□□□□□ -0.21
HDDC3-206ENST00000561036 NPFFO15130 113 aa13.73□□□□□ -0.21
HDDC3-206ENST00000561036 SOX15O60248 233 aa13.73□□□□□ -0.21
HDDC3-206ENST00000561036 ACTL6BO94805 426 aa13.73□□□□□ -0.21
HDDC3-206ENST00000561036 PRH1P02810 166 aa13.73□□□□□ -0.21
HDDC3-206ENST00000561036 IFNA4P05014 189 aa13.73□□□□□ -0.21
HDDC3-206ENST00000561036 CAMLGP49069 296 aa13.73□□□□□ -0.21
HDDC3-206ENST00000561036 AANATQ16613 207 aa13.73□□□□□ -0.21
HDDC3-206ENST00000561036 PXDC1Q5TGL8 231 aa13.73□□□□□ -0.21
HDDC3-206ENST00000561036 IL34Q6ZMJ4 242 aa13.73□□□□□ -0.21
HDDC3-206ENST00000561036 TMEM182Q6ZP80 229 aaPredicted RBP13.73□□□□□ -0.21
HDDC3-206ENST00000561036 PPP1R27Q86WC6 154 aa13.73□□□□□ -0.21
HDDC3-206ENST00000561036 LYPD6BQ8NI32 183 aa13.73□□□□□ -0.21
HDDC3-206ENST00000561036 MBD6Q96DN6 1003 aa13.73□□□□□ -0.21
HDDC3-206ENST00000561036 SRSF8Q9BRL6 282 aaKnown RBP13.73□□□□□ -0.21
HDDC3-206ENST00000561036 AKAP6Q13023 2319 aa13.72□□□□□ -0.21
HDDC3-206ENST00000561036 NBR2O15453 112 aa13.72□□□□□ -0.21
HDDC3-206ENST00000561036 MPDU1O75352 247 aa13.72□□□□□ -0.21
HDDC3-206ENST00000561036 NDUFA3O95167 84 aa13.72□□□□□ -0.21
HDDC3-206ENST00000561036 IGKV1D-33P01593 117 aa13.72□□□□□ -0.21
HDDC3-206ENST00000561036 IGKV1-33P01594 117 aa13.72□□□□□ -0.21
HDDC3-206ENST00000561036 OPN1MWP04001 364 aa13.72□□□□□ -0.21
HDDC3-206ENST00000561036 OPN1MW2P0DN77 364 aa13.72□□□□□ -0.21
HDDC3-206ENST00000561036 OPN1MW3P0DN78 364 aa13.72□□□□□ -0.21
HDDC3-206ENST00000561036 CNTFRP26992 372 aa13.72□□□□□ -0.21
HDDC3-206ENST00000561036 BRS3P32247 399 aa13.72□□□□□ -0.21
HDDC3-206ENST00000561036 SNCAP37840 140 aa13.72□□□□□ -0.21
HDDC3-206ENST00000561036 COMPP49747 757 aaPredicted RBP13.72□□□□□ -0.21
HDDC3-206ENST00000561036 SUB1P53999 127 aaKnown RBP eCLIP13.72□□□□□ -0.21
HDDC3-206ENST00000561036 KRTAP10-9P60411 292 aa13.72□□□□□ -0.21
HDDC3-206ENST00000561036 RUNX1Q01196 453 aa13.72□□□□□ -0.21
HDDC3-206ENST00000561036 AKR1C8PQ5T2L2 129 aa13.72□□□□□ -0.21
HDDC3-206ENST00000561036 BTNL8Q6UX41 500 aa13.72□□□□□ -0.21
HDDC3-206ENST00000561036 Q6ZRG5 221 aa13.72□□□□□ -0.21
HDDC3-206ENST00000561036 COMMD1Q8N668 190 aa13.72□□□□□ -0.21
HDDC3-206ENST00000561036 EAF1Q96JC9 268 aaPredicted RBP13.72□□□□□ -0.21
HDDC3-206ENST00000561036 TPSG1Q9NRR2 321 aa13.72□□□□□ -0.21
HDDC3-206ENST00000561036 KIAA1456Q9P272 454 aa13.72□□□□□ -0.21
HDDC3-206ENST00000561036 WDR83OSQ9Y284 106 aa13.72□□□□□ -0.21
HDDC3-206ENST00000561036 A0A096LNT2 108 aa13.71□□□□□ -0.21
HDDC3-206ENST00000561036 CENPVL3A0A0U1RRI6 287 aa13.71□□□□□ -0.21
HDDC3-206ENST00000561036 ANKRD34BA5PLL1 514 aa13.71□□□□□ -0.21
HDDC3-206ENST00000561036 CGB1A6NKQ9 187 aa13.71□□□□□ -0.21
HDDC3-206ENST00000561036 SNRNP70P08621 437 aaKnown RBP13.71□□□□□ -0.21
HDDC3-206ENST00000561036 RNASE2P10153 161 aaKnown RBP13.71□□□□□ -0.21
HDDC3-206ENST00000561036 FGF7P21781 194 aa13.71□□□□□ -0.21
HDDC3-206ENST00000561036 SAA4P35542 130 aa13.71□□□□□ -0.21
HDDC3-206ENST00000561036 RPL27AP46776 148 aaKnown RBP13.71□□□□□ -0.21
HDDC3-206ENST00000561036 PJVKQ0ZLH3 352 aa13.71□□□□□ -0.21
HDDC3-206ENST00000561036 UQCC3Q6UW78 93 aa13.71□□□□□ -0.21
HDDC3-206ENST00000561036 DYNAPQ8N1N2 210 aa13.71□□□□□ -0.21
HDDC3-206ENST00000561036 Q8N6K4 173 aa13.71□□□□□ -0.21
HDDC3-206ENST00000561036 AJUBAQ96IF1 538 aa13.71□□□□□ -0.21
HDDC3-206ENST00000561036 COL12A1Q99715 3063 aa13.7□□□□□ -0.22
HDDC3-206ENST00000561036 IGHV1-69DA0A0B4J2H0 117 aa13.7□□□□□ -0.22
HDDC3-206ENST00000561036 C17orf112F2Z3M2 114 aa13.7□□□□□ -0.22
HDDC3-206ENST00000561036 IGHV1-69P01742 117 aa13.7□□□□□ -0.22
HDDC3-206ENST00000561036 FAM106CPP0CH98 169 aa13.7□□□□□ -0.22
HDDC3-206ENST00000561036 LOXL1Q08397 574 aaPredicted RBP13.7□□□□□ -0.22
HDDC3-206ENST00000561036 MMDQ15546 238 aa13.7□□□□□ -0.22
HDDC3-206ENST00000561036 TNXAQ16473 311 aa13.7□□□□□ -0.22
HDDC3-206ENST00000561036 PRSS57Q6UWY2 283 aa13.7□□□□□ -0.22
HDDC3-206ENST00000561036 ZNF709Q8N972 641 aa13.7□□□□□ -0.22
HDDC3-206ENST00000561036 OR10W1Q8NGF6 305 aa13.7□□□□□ -0.22
HDDC3-206ENST00000561036 FAM213BQ8TBF2 198 aa13.7□□□□□ -0.22
HDDC3-206ENST00000561036 FAM210AQ96ND0 272 aa13.7□□□□□ -0.22
HDDC3-206ENST00000561036 RSG1Q9BU20 258 aa13.7□□□□□ -0.22
HDDC3-206ENST00000561036 FBXL15Q9H469 300 aa13.7□□□□□ -0.22
HDDC3-206ENST00000561036 TEX46H3BTG2 121 aa13.69□□□□□ -0.22
HDDC3-206ENST00000561036 MBP02144 154 aa13.69□□□□□ -0.22
HDDC3-206ENST00000561036 GPX4P36969 197 aaPredicted RBP13.69□□□□□ -0.22
HDDC3-206ENST00000561036 WT1-ASQ06250 92 aa13.69□□□□□ -0.22
HDDC3-206ENST00000561036 HES1Q14469 280 aa13.69□□□□□ -0.22
HDDC3-206ENST00000561036 PLGLAQ15195 96 aa13.69□□□□□ -0.22
HDDC3-206ENST00000561036 TUSC1Q2TAM9 212 aa13.69□□□□□ -0.22
HDDC3-206ENST00000561036 LINC01356Q8N9X3 169 aa13.69□□□□□ -0.22
HDDC3-206ENST00000561036 ZNF114Q8NC26 417 aa13.69□□□□□ -0.22
HDDC3-206ENST00000561036 RNASEH2CQ8TDP1 164 aaKnown RBP13.69□□□□□ -0.22
HDDC3-206ENST00000561036 CACNG8Q8WXS5 425 aa13.69□□□□□ -0.22
HDDC3-206ENST00000561036 HRH4Q9H3N8 390 aa13.69□□□□□ -0.22
HDDC3-206ENST00000561036 NPVFQ9HCQ7 196 aa13.69□□□□□ -0.22
HDDC3-206ENST00000561036 FBXO7Q9Y3I1 522 aa13.69□□□□□ -0.22
HDDC3-206ENST00000561036 LRRK2Q5S007 2527 aa13.69□□□□□ -0.22
HDDC3-206ENST00000561036 A0A1B0GW64 132 aa13.68□□□□□ -0.22
HDDC3-206ENST00000561036 IGLC7A0M8Q6 106 aa13.68□□□□□ -0.22
HDDC3-206ENST00000561036 BTBD17A6NE02 478 aa13.68□□□□□ -0.22
HDDC3-206ENST00000561036 E7EUB6 86 aa13.68□□□□□ -0.22
HDDC3-206ENST00000561036 TSPAN9O75954 239 aa13.68□□□□□ -0.22
HDDC3-206ENST00000561036 C5orf64Q2M2E5 130 aa13.68□□□□□ -0.22
HDDC3-206ENST00000561036 TMEM41BQ5BJD5 291 aa13.68□□□□□ -0.22
HDDC3-206ENST00000561036 C10orf55Q5SWW7 151 aa13.68□□□□□ -0.22
HDDC3-206ENST00000561036 PVRIGQ6DKI7 326 aa13.68□□□□□ -0.22
HDDC3-206ENST00000561036 LFNGQ8NES3 379 aa13.68□□□□□ -0.22
HDDC3-206ENST00000561036 C17orf50Q8WW18 174 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms