RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 KCNAB3O43448 404 aa11.8□□□□□ -0.52
VPS18-202ENST00000558474 NUP62P37198 522 aaPredicted RBP11.8□□□□□ -0.52
VPS18-202ENST00000558474 VDAC2P45880 294 aaPredicted RBP11.8□□□□□ -0.52
VPS18-202ENST00000558474 HOXA1P49639 335 aaPredicted RBP11.8□□□□□ -0.52
VPS18-202ENST00000558474 CX3CL1P78423 397 aa11.8□□□□□ -0.52
VPS18-202ENST00000558474 SSBP2P81877 361 aaPredicted RBP11.8□□□□□ -0.52
VPS18-202ENST00000558474 ERHP84090 104 aaKnown RBP11.8□□□□□ -0.52
VPS18-202ENST00000558474 FXYD3Q14802 87 aa11.8□□□□□ -0.52
VPS18-202ENST00000558474 ZNF546Q86UE3 836 aa11.8□□□□□ -0.52
VPS18-202ENST00000558474 ARPC1AQ92747 370 aa11.8□□□□□ -0.52
VPS18-202ENST00000558474 LYRM2Q9NU23 88 aaPredicted RBP11.8□□□□□ -0.52
VPS18-202ENST00000558474 OR5AC2Q9NZP5 309 aa11.8□□□□□ -0.52
VPS18-202ENST00000558474 ZNF580Q9UK33 172 aa11.8□□□□□ -0.52
VPS18-202ENST00000558474 IGHV7-81A0A0B4J1V7 117 aa11.79□□□□□ -0.52
VPS18-202ENST00000558474 SMLR1H3BR10 107 aa11.79□□□□□ -0.52
VPS18-202ENST00000558474 NXPH3O95157 252 aa11.79□□□□□ -0.52
VPS18-202ENST00000558474 AMY1AP04745 511 aa11.79□□□□□ -0.52
VPS18-202ENST00000558474 HNRNPCP07910 306 aaKnown RBP eCLIP11.79□□□□□ -0.52
VPS18-202ENST00000558474 FAM157CP0CG43 387 aa11.79□□□□□ -0.52
VPS18-202ENST00000558474 CRIP2P52943 208 aaPredicted RBP11.79□□□□□ -0.52
VPS18-202ENST00000558474 PAX9P55771 341 aa11.79□□□□□ -0.52
VPS18-202ENST00000558474 OR2C3Q8N628 320 aa11.79□□□□□ -0.52
VPS18-202ENST00000558474 INO80EQ8NBZ0 244 aaPredicted RBP11.79□□□□□ -0.52
VPS18-202ENST00000558474 DCUN1D4Q92564 292 aa11.79□□□□□ -0.52
VPS18-202ENST00000558474 SLC25A31Q9H0C2 315 aa11.79□□□□□ -0.52
VPS18-202ENST00000558474 GSX1Q9H4S2 264 aaPredicted RBP11.79□□□□□ -0.52
VPS18-202ENST00000558474 HEYLQ9NQ87 328 aaPredicted RBP11.79□□□□□ -0.52
VPS18-202ENST00000558474 PSENENQ9NZ42 101 aa11.79□□□□□ -0.52
VPS18-202ENST00000558474 TNFSF18Q9UNG2 199 aa11.79□□□□□ -0.52
VPS18-202ENST00000558474 SVEP1Q4LDE5 3571 aa11.79□□□□□ -0.52
VPS18-202ENST00000558474 FXYD6-FXYD2A0A087WZ82 144 aa11.78□□□□□ -0.52
VPS18-202ENST00000558474 CGB1A6NKQ9 187 aa11.78□□□□□ -0.52
VPS18-202ENST00000558474 INAFM1C9JVW0 142 aa11.78□□□□□ -0.52
VPS18-202ENST00000558474 CRLF1O75462 422 aa11.78□□□□□ -0.52
VPS18-202ENST00000558474 TSPAN9O75954 239 aa11.78□□□□□ -0.52
VPS18-202ENST00000558474 IGHG2P01859 326 aa11.78□□□□□ -0.52
VPS18-202ENST00000558474 HTR2BP41595 481 aa11.78□□□□□ -0.52
VPS18-202ENST00000558474 SUB1P53999 127 aaKnown RBP eCLIP11.78□□□□□ -0.52
VPS18-202ENST00000558474 GNB1P62873 340 aa11.78□□□□□ -0.52
VPS18-202ENST00000558474 BAXQ07812 192 aa11.78□□□□□ -0.52
VPS18-202ENST00000558474 ZNF345Q14585 488 aa11.78□□□□□ -0.52
VPS18-202ENST00000558474 BSXQ3C1V8 233 aa11.78□□□□□ -0.52
VPS18-202ENST00000558474 ACOT7LQ6ZUV0 252 aa11.78□□□□□ -0.52
VPS18-202ENST00000558474 ZNF114Q8NC26 417 aa11.78□□□□□ -0.52
VPS18-202ENST00000558474 OR11H4Q8NGC9 324 aa11.78□□□□□ -0.52
VPS18-202ENST00000558474 OR1L6Q8NGR2 347 aa11.78□□□□□ -0.52
VPS18-202ENST00000558474 SGMS2Q8NHU3 365 aa11.78□□□□□ -0.52
VPS18-202ENST00000558474 AQP10Q96PS8 301 aa11.78□□□□□ -0.52
VPS18-202ENST00000558474 HINT2Q9BX68 163 aa11.78□□□□□ -0.52
VPS18-202ENST00000558474 NPFFR1Q9GZQ6 430 aa11.78□□□□□ -0.52
VPS18-202ENST00000558474 STRAPQ9Y3F4 350 aaKnown RBP11.78□□□□□ -0.52
VPS18-202ENST00000558474 ACANP16112 2415 aa11.78□□□□□ -0.52
VPS18-202ENST00000558474 TNCP24821 2201 aa11.77□□□□□ -0.53
VPS18-202ENST00000558474 IGLC7A0M8Q6 106 aa11.77□□□□□ -0.53
VPS18-202ENST00000558474 MSGN1A6NI15 193 aa11.77□□□□□ -0.53
VPS18-202ENST00000558474 TEX22C9J3V5 150 aa11.77□□□□□ -0.53
VPS18-202ENST00000558474 E7EUB6 86 aa11.77□□□□□ -0.53
VPS18-202ENST00000558474 TMEM50AO95807 157 aa11.77□□□□□ -0.53
VPS18-202ENST00000558474 OPN1MWP04001 364 aa11.77□□□□□ -0.53
VPS18-202ENST00000558474 IGF1P05019 195 aa11.77□□□□□ -0.53
VPS18-202ENST00000558474 OPN1MW2P0DN77 364 aa11.77□□□□□ -0.53
VPS18-202ENST00000558474 OPN1MW3P0DN78 364 aa11.77□□□□□ -0.53
VPS18-202ENST00000558474 IAPPP10997 89 aa11.77□□□□□ -0.53
VPS18-202ENST00000558474 MYOD1P15172 320 aa11.77□□□□□ -0.53
VPS18-202ENST00000558474 HILS1P60008 231 aa11.77□□□□□ -0.53
VPS18-202ENST00000558474 TMEM267Q0VDI3 215 aaPredicted RBP11.77□□□□□ -0.53
VPS18-202ENST00000558474 OR2F1Q13607 317 aa11.77□□□□□ -0.53
VPS18-202ENST00000558474 C2orf83Q53S99 150 aa11.77□□□□□ -0.53
VPS18-202ENST00000558474 C10orf55Q5SWW7 151 aa11.77□□□□□ -0.53
VPS18-202ENST00000558474 TMEM14EPQ6UXP3 125 aa11.77□□□□□ -0.53
VPS18-202ENST00000558474 A0A0D9SG52 128 aa11.76□□□□□ -0.53
VPS18-202ENST00000558474 A0A1B0GW64 132 aa11.76□□□□□ -0.53
VPS18-202ENST00000558474 DNAJC9-AS1A6NH13 148 aa11.76□□□□□ -0.53
VPS18-202ENST00000558474 NPIPB5A8MRT5 1133 aa11.76□□□□□ -0.53
VPS18-202ENST00000558474 CRYGCP07315 174 aa11.76□□□□□ -0.53
VPS18-202ENST00000558474 C4BPBP20851 252 aa11.76□□□□□ -0.53
VPS18-202ENST00000558474 RPL12P30050 165 aaKnown RBP11.76□□□□□ -0.53
VPS18-202ENST00000558474 SNCAP37840 140 aa11.76□□□□□ -0.53
VPS18-202ENST00000558474 CAV2P51636 162 aa11.76□□□□□ -0.53
VPS18-202ENST00000558474 RAB11AP62491 216 aa11.76□□□□□ -0.53
VPS18-202ENST00000558474 AKIRIN2Q53H80 203 aa11.76□□□□□ -0.53
VPS18-202ENST00000558474 STX12Q86Y82 276 aa11.76□□□□□ -0.53
VPS18-202ENST00000558474 TMEM252Q8N6L7 170 aa11.76□□□□□ -0.53
VPS18-202ENST00000558474 SLC24A4Q8NFF2 622 aa11.76□□□□□ -0.53
VPS18-202ENST00000558474 HSPB9Q9BQS6 159 aa11.76□□□□□ -0.53
VPS18-202ENST00000558474 PRSS22Q9GZN4 317 aa11.76□□□□□ -0.53
VPS18-202ENST00000558474 MFFQ9GZY8 342 aa11.76□□□□□ -0.53
VPS18-202ENST00000558474 HIVEP2P31629 2446 aa11.76□□□□□ -0.53
VPS18-202ENST00000558474 SETXQ7Z333 2677 aaKnown RBP11.75□□□□□ -0.53
VPS18-202ENST00000558474 ARPC5O15511 151 aa11.75□□□□□ -0.53
VPS18-202ENST00000558474 CYB5BO43169 146 aa11.75□□□□□ -0.53
VPS18-202ENST00000558474 IFNA10P01566 189 aa11.75□□□□□ -0.53
VPS18-202ENST00000558474 RNASE1P07998 156 aaKnown RBP11.75□□□□□ -0.53
VPS18-202ENST00000558474 HKR1P10072 659 aa11.75□□□□□ -0.53
VPS18-202ENST00000558474 NPY1RP25929 384 aa11.75□□□□□ -0.53
VPS18-202ENST00000558474 SULT1A1P50225 295 aa11.75□□□□□ -0.53
VPS18-202ENST00000558474 WT1-ASQ06250 92 aa11.75□□□□□ -0.53
VPS18-202ENST00000558474 SPINK9Q5DT21 86 aa11.75□□□□□ -0.53
VPS18-202ENST00000558474 SPANXN5Q5MJ07 72 aa11.75□□□□□ -0.53
VPS18-202ENST00000558474 PVRIGQ6DKI7 326 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms