RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 AUNIPQ9H7T9 357 aa4.99□□□□□ -1.61
ATXN3-236ENST00000556220 VCX3AQ9NNX9 186 aa4.99□□□□□ -1.61
ATXN3-236ENST00000556220 UBQLN2Q9UHD9 624 aa4.99□□□□□ -1.61
ATXN3-236ENST00000556220 DAPK2Q9UIK4 370 aa4.99□□□□□ -1.61
ATXN3-236ENST00000556220 SPATA2Q9UM82 520 aa4.99□□□□□ -1.61
ATXN3-236ENST00000556220 KCNK7Q9Y2U2 307 aa4.99□□□□□ -1.61
ATXN3-236ENST00000556220 PEX16Q9Y5Y5 336 aa4.99□□□□□ -1.61
ATXN3-236ENST00000556220 TRGV11A0A075B6L2 103 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 FAM90A7PA6NKC0 464 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 MPTX1A8MV57 137 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 DEFB4AO15263 64 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 SSX5O60225 188 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 IGLV2-23P01705 113 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 PRH1P02810 166 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 GLAP06280 429 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 SCTP09683 121 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 OR9G9P0C7N8 305 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 C8orf88P0DMB2 117 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 APELAP0DMC3 54 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 P0DMU3 169 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 FAM231AP0DMU4 169 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 FAM231CP0DMU5 169 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 RAB3BP20337 219 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 SLC22A6Q4U2R8 563 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 HSD17B12Q53GQ0 312 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 PLAC9Q5JTB6 97 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 SOHLH1Q5JUK2 328 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 IDNKQ5T6J7 187 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 RAB12Q6IQ22 244 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 BTNL8Q6UX41 500 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 PDPNQ86YL7 162 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 MS4A15Q8N5U1 240 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 OR11H2Q8NH07 326 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 GPR148Q8TDV2 347 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 FAM46BQ96A09 425 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 ABHD14BQ96IU4 210 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 NEDD4LQ96PU5 975 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 PHB2Q99623 299 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 AGMATQ9BSE5 352 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 NICN1Q9BSH3 213 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 HRH4Q9H3N8 390 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 STEAP1Q9UHE8 339 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 HMCN2Q8NDA2 5059 aa4.98□□□□□ -1.61
ATXN3-236ENST00000556220 FLG2Q5D862 2391 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-236ENST00000556220 IGKV1D-8A0A087WSZ0 117 aa4.97□□□□□ -1.61
ATXN3-236ENST00000556220 ZNF320A2RRD8 509 aa4.97□□□□□ -1.61
ATXN3-236ENST00000556220 TMEM14DPA8MWL7 114 aa4.97□□□□□ -1.61
ATXN3-236ENST00000556220 A8MWP6 167 aa4.97□□□□□ -1.61
ATXN3-236ENST00000556220 RAB27BO00194 218 aa4.97□□□□□ -1.61
ATXN3-236ENST00000556220 SLC17A2O00624 439 aa4.97□□□□□ -1.61
ATXN3-236ENST00000556220 ITGB1BP1O14713 200 aa4.97□□□□□ -1.61
ATXN3-236ENST00000556220 MPPED1O15442 326 aa4.97□□□□□ -1.61
ATXN3-236ENST00000556220 ZNF93P35789 620 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-236ENST00000556220 TMEM50BP56557 158 aa4.97□□□□□ -1.61
ATXN3-236ENST00000556220 LINC00205P59089 165 aa4.97□□□□□ -1.61
ATXN3-236ENST00000556220 GPR176Q14439 515 aa4.97□□□□□ -1.61
ATXN3-236ENST00000556220 RBMY1FQ15415 496 aaKnown RBP4.97□□□□□ -1.61
ATXN3-236ENST00000556220 C15orf32Q32M92 178 aa4.97□□□□□ -1.61
ATXN3-236ENST00000556220 C2orf76Q3KRA6 126 aa4.97□□□□□ -1.61
ATXN3-236ENST00000556220 ODF3L2Q3SX64 289 aa4.97□□□□□ -1.61
ATXN3-236ENST00000556220 OR4A47Q6IF82 309 aa4.97□□□□□ -1.61
ATXN3-236ENST00000556220 Q6ZR54 194 aa4.97□□□□□ -1.61
ATXN3-236ENST00000556220 ZNF383Q8NA42 475 aa4.97□□□□□ -1.61
ATXN3-236ENST00000556220 DRAXINQ8NBI3 349 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-236ENST00000556220 NECAP1Q8NC96 275 aa4.97□□□□□ -1.61
ATXN3-236ENST00000556220 OR4A5Q8NH83 315 aa4.97□□□□□ -1.61
ATXN3-236ENST00000556220 MRPL30Q8TCC3 161 aaKnown RBP4.97□□□□□ -1.61
ATXN3-236ENST00000556220 PHYHIPQ92561 330 aa4.97□□□□□ -1.61
ATXN3-236ENST00000556220 MARC2Q969Z3 335 aa4.97□□□□□ -1.61
ATXN3-236ENST00000556220 MRGPRFQ96AM1 343 aa4.97□□□□□ -1.61
ATXN3-236ENST00000556220 SPAG8Q99932 426 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-236ENST00000556220 RNF126Q9BV68 326 aa4.97□□□□□ -1.61
ATXN3-236ENST00000556220 C6orf62Q9GZU0 229 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-236ENST00000556220 C5orf66Q9H5L9 145 aa4.97□□□□□ -1.61
ATXN3-236ENST00000556220 COMMD3Q9UBI1 195 aa4.97□□□□□ -1.61
ATXN3-236ENST00000556220 TRAV10A0A0B4J240 114 aa4.96□□□□□ -1.62
ATXN3-236ENST00000556220 SRRM4A7MD48 611 aaKnown RBP4.96□□□□□ -1.62
ATXN3-236ENST00000556220 TSPAN4O14817 238 aa4.96□□□□□ -1.62
ATXN3-236ENST00000556220 UPK1BO75841 260 aa4.96□□□□□ -1.62
ATXN3-236ENST00000556220 OR2J3O76001 311 aa4.96□□□□□ -1.62
ATXN3-236ENST00000556220 S1PR2O95136 353 aa4.96□□□□□ -1.62
ATXN3-236ENST00000556220 APOA2P02652 100 aa4.96□□□□□ -1.62
ATXN3-236ENST00000556220 IL7P13232 177 aa4.96□□□□□ -1.62
ATXN3-236ENST00000556220 FUT3P21217 361 aa4.96□□□□□ -1.62
ATXN3-236ENST00000556220 HLA-DMBP28068 263 aa4.96□□□□□ -1.62
ATXN3-236ENST00000556220 RORCP51449 518 aa4.96□□□□□ -1.62
ATXN3-236ENST00000556220 PSMD7P51665 324 aa4.96□□□□□ -1.62
ATXN3-236ENST00000556220 TRAM1Q15629 374 aa4.96□□□□□ -1.62
ATXN3-236ENST00000556220 HMGN3Q15651 99 aa4.96□□□□□ -1.62
ATXN3-236ENST00000556220 MRGPRG-AS1Q2M3A8 158 aa4.96□□□□□ -1.62
ATXN3-236ENST00000556220 TIMM50Q3ZCQ8 353 aa4.96□□□□□ -1.62
ATXN3-236ENST00000556220 ZNF585BQ52M93 769 aa4.96□□□□□ -1.62
ATXN3-236ENST00000556220 RNASE12Q5GAN4 147 aaKnown RBP4.96□□□□□ -1.62
ATXN3-236ENST00000556220 DDI2Q5TDH0 399 aa4.96□□□□□ -1.62
ATXN3-236ENST00000556220 TPRA1Q86W33 373 aa4.96□□□□□ -1.62
ATXN3-236ENST00000556220 TTC9CQ8N5M4 171 aa4.96□□□□□ -1.62
ATXN3-236ENST00000556220 SAMD12Q8N8I0 201 aa4.96□□□□□ -1.62
ATXN3-236ENST00000556220 OR5B3Q8NH48 314 aa4.96□□□□□ -1.62
ATXN3-236ENST00000556220 IL1F10Q8WWZ1 152 aa4.96□□□□□ -1.62
ATXN3-236ENST00000556220 C11orf54Q9H0W9 315 aaPredicted RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms