RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 TCTEX1D2Q8WW35 142 aa6.9□□□□□ -1.31
SCFD1-215ENST00000555259 GIMAP1Q8WWP7 306 aa6.9□□□□□ -1.31
SCFD1-215ENST00000555259 PYDC1Q8WXC3 89 aa6.9□□□□□ -1.31
SCFD1-215ENST00000555259 OR10C1Q96KK4 312 aa6.9□□□□□ -1.31
SCFD1-215ENST00000555259 ATP6V0BQ99437 205 aa6.9□□□□□ -1.31
SCFD1-215ENST00000555259 SRSF8Q9BRL6 282 aaKnown RBP6.9□□□□□ -1.31
SCFD1-215ENST00000555259 SMPD3Q9NY59 655 aaPredicted RBP6.9□□□□□ -1.31
SCFD1-215ENST00000555259 C21orf62Q9NYP8 219 aa6.9□□□□□ -1.31
SCFD1-215ENST00000555259 IGHV3OR16-13A0A075B7E8 117 aa6.89□□□□□ -1.31
SCFD1-215ENST00000555259 IGHV3-21A0A0B4J1V1 117 aa6.89□□□□□ -1.31
SCFD1-215ENST00000555259 IGHV3-74A0A0B4J1X5 117 aa6.89□□□□□ -1.31
SCFD1-215ENST00000555259 EPM2AB3EWF7 344 aa6.89□□□□□ -1.31
SCFD1-215ENST00000555259 CYB5BO43169 146 aa6.89□□□□□ -1.31
SCFD1-215ENST00000555259 HRASP01112 189 aa6.89□□□□□ -1.31
SCFD1-215ENST00000555259 SPP1P10451 314 aa6.89□□□□□ -1.31
SCFD1-215ENST00000555259 NPY1RP25929 384 aa6.89□□□□□ -1.31
SCFD1-215ENST00000555259 PLA2G7Q13093 441 aa6.89□□□□□ -1.31
SCFD1-215ENST00000555259 TIMM50Q3ZCQ8 353 aa6.89□□□□□ -1.31
SCFD1-215ENST00000555259 TCF24Q7RTU0 167 aa6.89□□□□□ -1.31
SCFD1-215ENST00000555259 FAM24BQ8N5W8 94 aa6.89□□□□□ -1.31
SCFD1-215ENST00000555259 GDPD1Q8N9F7 314 aa6.89□□□□□ -1.31
SCFD1-215ENST00000555259 CSNK1G2-AS1Q8NCQ2 148 aa6.89□□□□□ -1.31
SCFD1-215ENST00000555259 SCARB1Q8WTV0 552 aa6.89□□□□□ -1.31
SCFD1-215ENST00000555259 HSD17B10Q99714 261 aaKnown RBP6.89□□□□□ -1.31
SCFD1-215ENST00000555259 MS4A6AQ9H2W1 248 aa6.89□□□□□ -1.31
SCFD1-215ENST00000555259 TMEM14BQ9NUH8 114 aa6.89□□□□□ -1.31
SCFD1-215ENST00000555259 CLEC5AQ9NY25 188 aa6.89□□□□□ -1.31
SCFD1-215ENST00000555259 BET1LQ9NYM9 111 aa6.89□□□□□ -1.31
SCFD1-215ENST00000555259 SPATA2Q9UM82 520 aa6.89□□□□□ -1.31
SCFD1-215ENST00000555259 SRRM2Q9UQ35 2752 aaKnown RBP6.89□□□□□ -1.31
SCFD1-215ENST00000555259 IGKV1D-8A0A087WSZ0 117 aa6.88□□□□□ -1.31
SCFD1-215ENST00000555259 EFCAB10A6NFE3 127 aa6.88□□□□□ -1.31
SCFD1-215ENST00000555259 SLC17A2O00624 439 aa6.88□□□□□ -1.31
SCFD1-215ENST00000555259 NUPL2O15504 423 aaKnown RBP6.88□□□□□ -1.31
SCFD1-215ENST00000555259 YIF1AO95070 293 aa6.88□□□□□ -1.31
SCFD1-215ENST00000555259 CTSGP08311 255 aa6.88□□□□□ -1.31
SCFD1-215ENST00000555259 INAFM2P0DMQ5 153 aa6.88□□□□□ -1.31
SCFD1-215ENST00000555259 EIF4EBP1Q13541 118 aaPredicted RBP6.88□□□□□ -1.31
SCFD1-215ENST00000555259 HSD17B12Q53GQ0 312 aa6.88□□□□□ -1.31
SCFD1-215ENST00000555259 SLC25A24Q6NUK1 477 aa6.88□□□□□ -1.31
SCFD1-215ENST00000555259 OR10W1Q8NGF6 305 aa6.88□□□□□ -1.31
SCFD1-215ENST00000555259 DGCR14Q96DF8 476 aaKnown RBP6.88□□□□□ -1.31
SCFD1-215ENST00000555259 RAB3CQ96E17 227 aa6.88□□□□□ -1.31
SCFD1-215ENST00000555259 FAM210BQ96KR6 192 aa6.88□□□□□ -1.31
SCFD1-215ENST00000555259 CENPOQ9BU64 300 aa6.88□□□□□ -1.31
SCFD1-215ENST00000555259 PLGRKTQ9HBL7 147 aa6.88□□□□□ -1.31
SCFD1-215ENST00000555259 HRASLSQ9HDD0 168 aa6.88□□□□□ -1.31
SCFD1-215ENST00000555259 OR2W1Q9Y3N9 320 aa6.88□□□□□ -1.31
SCFD1-215ENST00000555259 TRAV14DV4A0A0A6YYC5 116 aa6.87□□□□□ -1.31
SCFD1-215ENST00000555259 IGKV1D-13A0A0B4J2D9 117 aa6.87□□□□□ -1.31
SCFD1-215ENST00000555259 DNASE2O00115 360 aaPredicted RBP6.87□□□□□ -1.31
SCFD1-215ENST00000555259 SLC22A5O76082 557 aa6.87□□□□□ -1.31
SCFD1-215ENST00000555259 HLA-DQB1P01920 261 aa6.87□□□□□ -1.31
SCFD1-215ENST00000555259 CD5P06127 495 aa6.87□□□□□ -1.31
SCFD1-215ENST00000555259 SERPINE2P07093 398 aa6.87□□□□□ -1.31
SCFD1-215ENST00000555259 IGKV1-13P0DP09 117 aa6.87□□□□□ -1.31
SCFD1-215ENST00000555259 WNT4P56705 351 aa6.87□□□□□ -1.31
SCFD1-215ENST00000555259 RELQ04864 619 aaPredicted RBP6.87□□□□□ -1.31
SCFD1-215ENST00000555259 WT1-ASQ06250 92 aa6.87□□□□□ -1.31
SCFD1-215ENST00000555259 ST3GAL4Q11206 333 aa6.87□□□□□ -1.31
SCFD1-215ENST00000555259 Q56UQ5 140 aa6.87□□□□□ -1.31
SCFD1-215ENST00000555259 Q6ZS49 121 aa6.87□□□□□ -1.31
SCFD1-215ENST00000555259 SPATA12Q7Z6I5 190 aa6.87□□□□□ -1.31
SCFD1-215ENST00000555259 MFSD4AQ8N468 514 aa6.87□□□□□ -1.31
SCFD1-215ENST00000555259 MS4A15Q8N5U1 240 aa6.87□□□□□ -1.31
SCFD1-215ENST00000555259 GPHA2Q96T91 129 aa6.87□□□□□ -1.31
SCFD1-215ENST00000555259 GFI1Q99684 422 aa6.87□□□□□ -1.31
SCFD1-215ENST00000555259 QTRT1Q9BXR0 403 aaKnown RBP6.87□□□□□ -1.31
SCFD1-215ENST00000555259 COMMD5Q9GZQ3 224 aa6.87□□□□□ -1.31
SCFD1-215ENST00000555259 TAS2R8Q9NYW2 309 aa6.87□□□□□ -1.31
SCFD1-215ENST00000555259 TRAV2A0A0B4J234 112 aa6.86□□□□□ -1.31
SCFD1-215ENST00000555259 TRAV3A0A0B4J244 114 aa6.86□□□□□ -1.31
SCFD1-215ENST00000555259 K7EIM0 57 aa6.86□□□□□ -1.31
SCFD1-215ENST00000555259 MFNGO00587 321 aa6.86□□□□□ -1.31
SCFD1-215ENST00000555259 DENRO43583 198 aaKnown RBP6.86□□□□□ -1.31
SCFD1-215ENST00000555259 OR13C7P0DN81 318 aa6.86□□□□□ -1.31
SCFD1-215ENST00000555259 GNB3P16520 340 aa6.86□□□□□ -1.31
SCFD1-215ENST00000555259 NFYAP23511 347 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-215ENST00000555259 CLDN12P56749 244 aa6.86□□□□□ -1.31
SCFD1-215ENST00000555259 RAB11BQ15907 218 aa6.86□□□□□ -1.31
SCFD1-215ENST00000555259 C6orf223Q8N319 242 aa6.86□□□□□ -1.31
SCFD1-215ENST00000555259 LILRB2Q8N423 598 aa6.86□□□□□ -1.31
SCFD1-215ENST00000555259 ST8SIA2Q92186 375 aa6.86□□□□□ -1.31
SCFD1-215ENST00000555259 KNCNA6PVL3 124 aa6.86□□□□□ -1.31
SCFD1-215ENST00000555259 UPK2O00526 184 aa6.86□□□□□ -1.31
SCFD1-215ENST00000555259 MYL12BO14950 172 aa6.86□□□□□ -1.31
SCFD1-215ENST00000555259 ST8SIA3O43173 380 aa6.86□□□□□ -1.31
SCFD1-215ENST00000555259 ATP8B1O43520 1251 aa6.86□□□□□ -1.31
SCFD1-215ENST00000555259 UCHL1P09936 223 aa6.86□□□□□ -1.31
SCFD1-215ENST00000555259 RPL11P62913 178 aaKnown RBP6.86□□□□□ -1.31
SCFD1-215ENST00000555259 C2orf76Q3KRA6 126 aa6.86□□□□□ -1.31
SCFD1-215ENST00000555259 UBE2UQ5VVX9 321 aa6.86□□□□□ -1.31
SCFD1-215ENST00000555259 FAM3DQ96BQ1 224 aa6.86□□□□□ -1.31
SCFD1-215ENST00000555259 AIFM2Q9BRQ8 373 aa6.86□□□□□ -1.31
SCFD1-215ENST00000555259 C9orf16Q9BUW7 83 aa6.86□□□□□ -1.31
SCFD1-215ENST00000555259 RNF167Q9H6Y7 350 aa6.86□□□□□ -1.31
SCFD1-215ENST00000555259 VSIRQ9H7M9 311 aa6.86□□□□□ -1.31
SCFD1-215ENST00000555259 F11RQ9Y624 299 aaKnown RBP6.86□□□□□ -1.31
SCFD1-215ENST00000555259 FLG2Q5D862 2391 aaPredicted RBP6.85□□□□□ -1.31
SCFD1-215ENST00000555259 VPS13BQ7Z7G8 4022 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms