RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 DAP3P51398 398 aaKnown RBP7.9□□□□□ -1.14
CTNNA1-243ENST00000540387 FOXC1Q12948 553 aa7.9□□□□□ -1.14
CTNNA1-243ENST00000540387 PDCD1Q15116 288 aa7.9□□□□□ -1.14
CTNNA1-243ENST00000540387 COX19Q49B96 90 aa7.9□□□□□ -1.14
CTNNA1-243ENST00000540387 TMEM177Q53S58 311 aa7.9□□□□□ -1.14
CTNNA1-243ENST00000540387 A0A0G2JLM5 398 aa7.9□□□□□ -1.15
CTNNA1-243ENST00000540387 CD300LBA8K4G0 201 aa7.9□□□□□ -1.15
CTNNA1-243ENST00000540387 APCSP02743 223 aa7.9□□□□□ -1.15
CTNNA1-243ENST00000540387 AMY1AP04745 511 aa7.9□□□□□ -1.15
CTNNA1-243ENST00000540387 TFF3Q07654 80 aa7.9□□□□□ -1.15
CTNNA1-243ENST00000540387 OR8B8Q15620 311 aa7.9□□□□□ -1.15
CTNNA1-243ENST00000540387 LTC4SQ16873 150 aa7.9□□□□□ -1.15
CTNNA1-243ENST00000540387 COLCA1Q6ZS62 124 aa7.9□□□□□ -1.15
CTNNA1-243ENST00000540387 ZNF441Q8N8Z8 693 aa7.9□□□□□ -1.15
CTNNA1-243ENST00000540387 ZFHX4Q86UP3 3567 aa7.9□□□□□ -1.15
CTNNA1-243ENST00000540387 PTPRBP23467 1997 aa7.9□□□□□ -1.15
CTNNA1-243ENST00000540387 TMEM189A5PLL7 270 aa7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 FRG2CA6NGY1 282 aa7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 ZNF207O43670 478 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 RBMXL2O75526 392 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 PGLYRP1O75594 196 aaPredicted RBP7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 RHBDL1O75783 438 aa7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 CDAP32320 146 aa7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 SRSF6Q13247 344 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 TMEM97Q5BJF2 176 aa7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 C2orf91Q6ZV80 131 aa7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 MED12LQ86YW9 2145 aa7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 OR1L1Q8NH94 360 aa7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 OR2T6Q8NHC8 308 aa7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 VSTM2AQ8TAG5 236 aa7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 PP6455Q8WZ26 134 aa7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 LSM10Q969L4 123 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 SPATA25Q9BR10 227 aa7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 TECRQ9NZ01 308 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 SS18L2Q9UHA2 77 aa7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 PIGLQ9Y2B2 252 aa7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 SPCS1Q9Y6A9 102 aa7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 LAMA5O15230 3695 aa7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 CEP295Q9C0D2 2601 aa7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 KLRC4-KLRK1H3BQV0 150 aa7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 ZFAND5O76080 213 aa7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 CRYGCP07315 174 aa7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 ADH4P08319 380 aa7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 PSG2P11465 335 aa7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 F2RP25116 425 aa7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 REG1BP48304 166 aa7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 CEBPDP49716 269 aaPredicted RBP7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 TCL1AP56279 114 aa7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 RNASEKQ6P5S7 137 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 STPG3Q8N7X2 389 aa7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 TMEM45BQ96B21 275 aa7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 DEFB126Q9BYW3 111 aa7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 LINC00470Q9BZP3 86 aa7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 TNRC6AQ8NDV7 1962 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 CNTRLQ7Z7A1 2325 aa7.89□□□□□ -1.15
CTNNA1-243ENST00000540387 NCOA6Q14686 2063 aaPredicted RBP7.88□□□□□ -1.15
CTNNA1-243ENST00000540387 ANKRD30BLA7E2S9 258 aa7.88□□□□□ -1.15
CTNNA1-243ENST00000540387 CRXO43186 299 aaPredicted RBP7.88□□□□□ -1.15
CTNNA1-243ENST00000540387 DHRS3O75911 302 aa7.88□□□□□ -1.15
CTNNA1-243ENST00000540387 APOA2P02652 100 aa7.88□□□□□ -1.15
CTNNA1-243ENST00000540387 HIST1H1EP10412 219 aaKnown RBP7.88□□□□□ -1.15
CTNNA1-243ENST00000540387 CCNOP22674 350 aa7.88□□□□□ -1.15
CTNNA1-243ENST00000540387 FABP6P51161 128 aa7.88□□□□□ -1.15
CTNNA1-243ENST00000540387 Q0VFX4 171 aa7.88□□□□□ -1.15
CTNNA1-243ENST00000540387 TMEM211Q6ICI0 200 aa7.88□□□□□ -1.15
CTNNA1-243ENST00000540387 TMEM14EPQ6UXP3 125 aa7.88□□□□□ -1.15
CTNNA1-243ENST00000540387 OR51H1Q8NH63 302 aa7.88□□□□□ -1.15
CTNNA1-243ENST00000540387 C10orf35Q96D05 121 aa7.88□□□□□ -1.15
CTNNA1-243ENST00000540387 TMEM147Q9BVK8 224 aa7.88□□□□□ -1.15
CTNNA1-243ENST00000540387 NPCDR1Q9BY65 106 aa7.88□□□□□ -1.15
CTNNA1-243ENST00000540387 TNFRSF19Q9NS68 423 aa7.88□□□□□ -1.15
CTNNA1-243ENST00000540387 PLEK2Q9NYT0 353 aa7.88□□□□□ -1.15
CTNNA1-243ENST00000540387 C1RLQ9NZP8 487 aa7.88□□□□□ -1.15
CTNNA1-243ENST00000540387 TRAV38-1A0A0B4J264 116 aa7.88□□□□□ -1.15
CTNNA1-243ENST00000540387 IGLV3-1P01715 115 aa7.88□□□□□ -1.15
CTNNA1-243ENST00000540387 LIFP15018 202 aa7.88□□□□□ -1.15
CTNNA1-243ENST00000540387 GATA3P23771 443 aa7.88□□□□□ -1.15
CTNNA1-243ENST00000540387 CD1BP29016 333 aa7.88□□□□□ -1.15
CTNNA1-243ENST00000540387 SLC35E4Q6ICL7 350 aa7.88□□□□□ -1.15
CTNNA1-243ENST00000540387 SCNM1Q9BWG6 230 aa7.88□□□□□ -1.15
CTNNA1-243ENST00000540387 ZNF442Q9H7R0 627 aa7.88□□□□□ -1.15
CTNNA1-243ENST00000540387 SYS1-DBNDD2H3BUS1 97 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 CLDN1O95832 211 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 IGKV1-39P01597 117 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 IGKV1D-39P04432 117 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 PLCXD2Q0VAA5 305 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 MALLQ13021 153 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 MFAP5Q13361 173 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 GCSAMLQ5JQS6 135 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 ATP1A1-AS1Q5TC04 95 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 SPACA3Q8IXA5 215 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 MTURNQ8N3F0 131 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 MBD6Q96DN6 1003 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 TAAR6Q96RI8 345 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 LOC400499M0QZD8 3231 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 CFAP47Q6ZTR5 3102 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 IGKV1-27A0A075B6S5 117 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 A0A1W2PPM0 123 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 A6NDN8 102 aa7.87□□□□□ -1.15
CTNNA1-243ENST00000540387 OR11H12B2RN74 326 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms