RNA–Protein interactions for RNA: ENST00000535949.5

ATXN2-214, Transcript of ataxin 2, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATXN2, Length 3,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-214	ENST00000535949	ACTL6B	O94805	426 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	IFNA10	P01566	189 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	NHLH2	Q02577	135 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	C5orf64	Q2M2E5	130 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	ETV3L	Q6ZN32	361 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	OR1P1	Q8NH06	330 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	TAF15	Q92804	592 aa	Known RBP eCLIP	5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	AJUBA	Q96IF1	538 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	SIRT7	Q9NRC8	400 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	METTL1	Q9UBP6	276 aa	Known RBP	5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	PITPNC1	Q9UKF7	332 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	YLPM1	P49750	1951 aa	Known RBP	5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	CENPVL3	A0A0U1RRI6	287 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949		I3L521	148 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	FABP1	P07148	127 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	FAM157C	P0CG43	387 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	RNASE2	P10153	161 aa	Known RBP	5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	OPRK1	P41145	380 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	SCGB2A2	Q13296	93 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	FAM209B	Q5JX69	171 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	SLC25A24	Q6NUK1	477 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	HAPLN4	Q86UW8	402 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	C22orf15	Q8WYQ4	148 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	EAF1	Q96JC9	268 aa	Predicted RBP	5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	PRDM13	Q9H4Q3	707 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	IGHV3-7	P01780	117 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	ATP6V0C	P27449	155 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	TMEM267	Q0VDI3	215 aa	Predicted RBP	5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	MRGPRG-AS1	Q2M3A8	158 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	TMEM41B	Q5BJD5	291 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949		Q5PR19	223 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	AKR1C8P	Q5T2L2	129 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	CYB5R2	Q6BCY4	276 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	ZNF562	Q6V9R5	426 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	SSX9	Q7RTT3	188 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	ZNF709	Q8N972	641 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	OR5R1	Q8NH85	324 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	RBMXL1	Q96E39	390 aa	Known RBP	5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	REG4	Q9BYZ8	158 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	NARFL	Q9H6Q4	476 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	NPVF	Q9HCQ7	196 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949	TMEM160	Q9NX00	188 aa		5.78	□□□□□ -1.48
ATXN2-214	ENST00000535949		A1L4Q6	167 aa		5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949		H3BUA1	57 aa		5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949	SLC25A17	O43808	307 aa		5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949	CRYGC	P07315	174 aa		5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949	FBP1	P09467	338 aa		5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949	METTL15P1	P0C7V9	234 aa		5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949	TMEM11	P17152	192 aa		5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949	SAA4	P35542	130 aa		5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949	SNCA	P37840	140 aa		5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949	SELENOT	P62341	195 aa		5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949	ALKAL2	Q6UX46	152 aa		5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949	TMEM144	Q7Z5S9	345 aa		5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949	THAP8	Q8NA92	274 aa		5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949	RNF24	Q9Y225	148 aa		5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949	MOB4	Q9Y3A3	225 aa		5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949	ARL2-SNX15	V9GYD0	113 aa		5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949	DSP	P15924	2871 aa	Known RBP	5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949	TRAV3	A0A0B4J244	114 aa		5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949		A0A1W2PRD5	423 aa		5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949		A0A1W2PRF3	423 aa		5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949		A0A1W2PRM7	423 aa		5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949	MEX3A	A1L020	520 aa	Known RBP	5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949	HMGB3	O15347	200 aa	Known RBP	5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949	S100A7	P31151	101 aa		5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949	FCGR2B	P31994	310 aa	Predicted RBP	5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949	REG1B	P48304	166 aa		5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949	KLRD1	Q13241	179 aa		5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949	TMEM86B	Q8N661	226 aa		5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949	MBD3L1	Q8WWY6	194 aa		5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949	LSM4	Q9Y4Z0	139 aa	Known RBP	5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949	SPEN	Q96T58	3664 aa	Known RBP	5.77	□□□□□ -1.49
ATXN2-214	ENST00000535949	CACNA1B	Q00975	2339 aa		5.76	□□□□□ -1.49
ATXN2-214	ENST00000535949	IGLC7	A0M8Q6	106 aa		5.76	□□□□□ -1.49
ATXN2-214	ENST00000535949	MFSD2B	A6NFX1	497 aa		5.76	□□□□□ -1.49
ATXN2-214	ENST00000535949	SEC14L6	B5MCN3	397 aa		5.76	□□□□□ -1.49
ATXN2-214	ENST00000535949	KCNAB3	O43448	404 aa		5.76	□□□□□ -1.49
ATXN2-214	ENST00000535949	CST7	O76096	145 aa		5.76	□□□□□ -1.49
ATXN2-214	ENST00000535949	CA2	P00918	260 aa		5.76	□□□□□ -1.49
ATXN2-214	ENST00000535949	IGKV1D-33	P01593	117 aa		5.76	□□□□□ -1.49
ATXN2-214	ENST00000535949	IGKV1-33	P01594	117 aa		5.76	□□□□□ -1.49
ATXN2-214	ENST00000535949	IGHV4-31	P0DP07	118 aa		5.76	□□□□□ -1.49
ATXN2-214	ENST00000535949	RPL29	P47914	159 aa	Known RBP	5.76	□□□□□ -1.49
ATXN2-214	ENST00000535949	CD69	Q07108	199 aa		5.76	□□□□□ -1.49
ATXN2-214	ENST00000535949	DIAPH2-AS1	Q14236	149 aa		5.76	□□□□□ -1.49
ATXN2-214	ENST00000535949	IZUMO4	Q1ZYL8	232 aa		5.76	□□□□□ -1.49
ATXN2-214	ENST00000535949	ACOT6	Q3I5F7	207 aa	Predicted RBP	5.76	□□□□□ -1.49
ATXN2-214	ENST00000535949	BTNL8	Q6UX41	500 aa		5.76	□□□□□ -1.49
ATXN2-214	ENST00000535949	S100A7A	Q86SG5	101 aa		5.76	□□□□□ -1.49
ATXN2-214	ENST00000535949	TTC9C	Q8N5M4	171 aa		5.76	□□□□□ -1.49
ATXN2-214	ENST00000535949	TMED6	Q8WW62	240 aa		5.76	□□□□□ -1.49
ATXN2-214	ENST00000535949	RBM14	Q96PK6	669 aa	Known RBP	5.76	□□□□□ -1.49
ATXN2-214	ENST00000535949	TXN2	Q99757	166 aa		5.76	□□□□□ -1.49
ATXN2-214	ENST00000535949	PBDC1	Q9BVG4	233 aa		5.76	□□□□□ -1.49
ATXN2-214	ENST00000535949	GAR1	Q9NY12	217 aa	Known RBP	5.76	□□□□□ -1.49
ATXN2-214	ENST00000535949	ZNRD1	Q9P1U0	126 aa		5.76	□□□□□ -1.49
ATXN2-214	ENST00000535949	F11R	Q9Y624	299 aa	Known RBP	5.76	□□□□□ -1.49
ATXN2-214	ENST00000535949	CFAP47	Q6ZTR5	3102 aa		5.76	□□□□□ -1.49
ATXN2-214	ENST00000535949	TMEM89	A2RUT3	159 aa		5.76	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms