RNA–Protein interactions for RNA: ENST00000526829.1

VPS11-202, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 1,952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-202ENST00000526829 ADAT3Q96EY9 351 aaPredicted RBP9.28□□□□□ -0.92
VPS11-202ENST00000526829 SNX22Q96L94 193 aa9.28□□□□□ -0.92
VPS11-202ENST00000526829 MRPS28Q9Y2Q9 187 aaKnown RBP9.28□□□□□ -0.92
VPS11-202ENST00000526829 CR1P17927 2039 aa9.28□□□□□ -0.92
VPS11-202ENST00000526829 RTTNQ86VV8 2226 aa9.28□□□□□ -0.92
VPS11-202ENST00000526829 TRBV24-1A0A075B6N3 115 aa9.28□□□□□ -0.92
VPS11-202ENST00000526829 ZNF705FA8MVS1 300 aaPredicted RBP9.28□□□□□ -0.92
VPS11-202ENST00000526829 RNF223E7ERA6 249 aa9.28□□□□□ -0.92
VPS11-202ENST00000526829 H0YL77 283 aa9.28□□□□□ -0.92
VPS11-202ENST00000526829 LYZL6O75951 148 aa9.28□□□□□ -0.92
VPS11-202ENST00000526829 ZNF705DP0CH99 300 aaPredicted RBP9.28□□□□□ -0.92
VPS11-202ENST00000526829 ZNF705BP0CI00 300 aaPredicted RBP9.28□□□□□ -0.92
VPS11-202ENST00000526829 ZNF823P16415 610 aa9.28□□□□□ -0.92
VPS11-202ENST00000526829 BSPH1Q075Z2 132 aa9.28□□□□□ -0.92
VPS11-202ENST00000526829 ICAM4Q14773 271 aa9.28□□□□□ -0.92
VPS11-202ENST00000526829 TIMM23BQ5SRD1 257 aa9.28□□□□□ -0.92
VPS11-202ENST00000526829 PNKDQ8N490 385 aa9.28□□□□□ -0.92
VPS11-202ENST00000526829 OR9G4Q8NGQ1 327 aa9.28□□□□□ -0.92
VPS11-202ENST00000526829 SPATA3Q8NHX4 192 aa9.28□□□□□ -0.92
VPS11-202ENST00000526829 C1orf147Q96MC9 270 aaPredicted RBP9.28□□□□□ -0.92
VPS11-202ENST00000526829 ST6GALNAC5Q9BVH7 336 aa9.28□□□□□ -0.92
VPS11-202ENST00000526829 TMEM59Q9BXS4 323 aa9.28□□□□□ -0.92
VPS11-202ENST00000526829 PPDPFQ9H3Y8 114 aa9.28□□□□□ -0.92
VPS11-202ENST00000526829 PATZ1Q9HBE1 687 aaKnown RBP9.28□□□□□ -0.92
VPS11-202ENST00000526829 CISD1Q9NZ45 108 aaKnown RBP9.28□□□□□ -0.92
VPS11-202ENST00000526829 PRSS50Q9UI38 385 aa9.28□□□□□ -0.92
VPS11-202ENST00000526829 LIPT2A6NK58 231 aa9.27□□□□□ -0.93
VPS11-202ENST00000526829 ZNF878C9JN71 531 aa9.27□□□□□ -0.93
VPS11-202ENST00000526829 CLDN34H7C241 214 aa9.27□□□□□ -0.93
VPS11-202ENST00000526829 SDCBPO00560 298 aaPredicted RBP9.27□□□□□ -0.93
VPS11-202ENST00000526829 HBZP02008 142 aa9.27□□□□□ -0.93
VPS11-202ENST00000526829 TTRP02766 147 aa9.27□□□□□ -0.93
VPS11-202ENST00000526829 H2BFMP0C1H6 154 aa9.27□□□□□ -0.93
VPS11-202ENST00000526829 CCL20P78556 96 aa9.27□□□□□ -0.93
VPS11-202ENST00000526829 HLA-DRB3P79483 266 aa9.27□□□□□ -0.93
VPS11-202ENST00000526829 LCN2P80188 198 aa9.27□□□□□ -0.93
VPS11-202ENST00000526829 ZNF266Q14584 549 aa9.27□□□□□ -0.93
VPS11-202ENST00000526829 GTF2H5Q6ZYL4 71 aa9.27□□□□□ -0.93
VPS11-202ENST00000526829 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.27□□□□□ -0.93
VPS11-202ENST00000526829 OR4B1Q8NGF8 309 aa9.27□□□□□ -0.93
VPS11-202ENST00000526829 ARHGAP5-AS1Q96IT6 56 aa9.27□□□□□ -0.93
VPS11-202ENST00000526829 VAMP8Q9BV40 100 aa9.27□□□□□ -0.93
VPS11-202ENST00000526829 CTDSP1Q9GZU7 261 aa9.27□□□□□ -0.93
VPS11-202ENST00000526829 CDH20Q9HBT6 801 aa9.27□□□□□ -0.93
VPS11-202ENST00000526829 FAM206AQ9NX38 181 aa9.27□□□□□ -0.93
VPS11-202ENST00000526829 COA3Q9Y2R0 106 aaPredicted RBP9.27□□□□□ -0.93
VPS11-202ENST00000526829 WSB1Q9Y6I7 421 aa9.27□□□□□ -0.93
VPS11-202ENST00000526829 FBN1P35555 2871 aaKnown RBP9.27□□□□□ -0.93
VPS11-202ENST00000526829 CADP27708 2225 aa9.27□□□□□ -0.93
VPS11-202ENST00000526829 DPRXA6NFQ7 191 aa9.26□□□□□ -0.93
VPS11-202ENST00000526829 ETV2O00321 342 aaPredicted RBP9.26□□□□□ -0.93
VPS11-202ENST00000526829 DNPH1O43598 174 aa9.26□□□□□ -0.93
VPS11-202ENST00000526829 FOXH1O75593 365 aa9.26□□□□□ -0.93
VPS11-202ENST00000526829 PGA4P0DJD7 388 aa9.26□□□□□ -0.93
VPS11-202ENST00000526829 PGA5P0DJD9 388 aa9.26□□□□□ -0.93
VPS11-202ENST00000526829 HNRNPA3P51991 378 aaKnown RBP9.26□□□□□ -0.93
VPS11-202ENST00000526829 PNRC1Q12796 327 aaPredicted RBP9.26□□□□□ -0.93
VPS11-202ENST00000526829 FA2HQ7L5A8 372 aa9.26□□□□□ -0.93
VPS11-202ENST00000526829 LRTM2Q8N967 370 aa9.26□□□□□ -0.93
VPS11-202ENST00000526829 VN1R17PQ8TDU5 208 aa9.26□□□□□ -0.93
VPS11-202ENST00000526829 RBMXL1Q96E39 390 aaKnown RBP9.26□□□□□ -0.93
VPS11-202ENST00000526829 STAB1Q9NY15 2570 aa9.26□□□□□ -0.93
VPS11-202ENST00000526829 ABCA1O95477 2261 aa9.26□□□□□ -0.93
VPS11-202ENST00000526829 MXRA5Q9NR99 2828 aa9.26□□□□□ -0.93
VPS11-202ENST00000526829 A0A087WX48 190 aa9.26□□□□□ -0.93
VPS11-202ENST00000526829 TRAV38-1A0A0B4J264 116 aa9.26□□□□□ -0.93
VPS11-202ENST00000526829 GAGE12HA6NDE8 117 aa9.26□□□□□ -0.93
VPS11-202ENST00000526829 SYNGR3O43761 229 aa9.26□□□□□ -0.93
VPS11-202ENST00000526829 MRPL33O75394 65 aaKnown RBP9.26□□□□□ -0.93
VPS11-202ENST00000526829 MPZL1O95297 269 aa9.26□□□□□ -0.93
VPS11-202ENST00000526829 IGLC1P0CG04 106 aa9.26□□□□□ -0.93
VPS11-202ENST00000526829 ZNF20P17024 532 aa9.26□□□□□ -0.93
VPS11-202ENST00000526829 OR3A4PP47883 348 aa9.26□□□□□ -0.93
VPS11-202ENST00000526829 DSCR9P59020 149 aa9.26□□□□□ -0.93
VPS11-202ENST00000526829 FOXE3Q13461 319 aa9.26□□□□□ -0.93
VPS11-202ENST00000526829 OR5AS1Q8N127 324 aa9.26□□□□□ -0.93
VPS11-202ENST00000526829 FBXL14Q8N1E6 418 aa9.26□□□□□ -0.93
VPS11-202ENST00000526829 CYB561D1Q8N8Q1 229 aa9.26□□□□□ -0.93
VPS11-202ENST00000526829 OR2G3Q8NGZ4 309 aa9.26□□□□□ -0.93
VPS11-202ENST00000526829 NEUROG1Q92886 237 aa9.26□□□□□ -0.93
VPS11-202ENST00000526829 APOBEC3DQ96AK3 386 aaPredicted RBP9.26□□□□□ -0.93
VPS11-202ENST00000526829 ZNF524Q96C55 264 aa9.26□□□□□ -0.93
VPS11-202ENST00000526829 RNF183Q96D59 192 aa9.26□□□□□ -0.93
VPS11-202ENST00000526829 DERL1Q9BUN8 251 aa9.26□□□□□ -0.93
VPS11-202ENST00000526829 OR10A2Q9H208 303 aa9.26□□□□□ -0.93
VPS11-202ENST00000526829 A0A1B0GV50 99 aa9.25□□□□□ -0.93
VPS11-202ENST00000526829 FOXI3A8MTJ6 420 aaPredicted RBP9.25□□□□□ -0.93
VPS11-202ENST00000526829 GEMIN2O14893 280 aaKnown RBP9.25□□□□□ -0.93
VPS11-202ENST00000526829 MPPED1O15442 326 aa9.25□□□□□ -0.93
VPS11-202ENST00000526829 HBE1P02100 147 aa9.25□□□□□ -0.93
VPS11-202ENST00000526829 WNT2P09544 360 aa9.25□□□□□ -0.93
VPS11-202ENST00000526829 PSG2P11465 335 aa9.25□□□□□ -0.93
VPS11-202ENST00000526829 IGHV1-2P23083 117 aa9.25□□□□□ -0.93
VPS11-202ENST00000526829 MDH2P40926 338 aaKnown RBP9.25□□□□□ -0.93
VPS11-202ENST00000526829 TMEM267Q0VDI3 215 aaPredicted RBP9.25□□□□□ -0.93
VPS11-202ENST00000526829 TMEM187Q14656 261 aa9.25□□□□□ -0.93
VPS11-202ENST00000526829 OR5B3Q8NH48 314 aa9.25□□□□□ -0.93
VPS11-202ENST00000526829 DDIT4LQ96D03 193 aa9.25□□□□□ -0.93
VPS11-202ENST00000526829 PBOV1Q9GZY1 135 aa9.25□□□□□ -0.93
VPS11-202ENST00000526829 BANF2Q9H503 90 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms