RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 IFNA10P01566 189 aa11.65□□□□□ -0.54
CLN8-204ENST00000519254 HTR1DP28221 377 aa11.65□□□□□ -0.54
CLN8-204ENST00000519254 MC5RP33032 325 aa11.65□□□□□ -0.54
CLN8-204ENST00000519254 ZNF616Q08AN1 781 aa11.65□□□□□ -0.54
CLN8-204ENST00000519254 VWC2Q2TAL6 325 aa11.65□□□□□ -0.54
CLN8-204ENST00000519254 FAM213BQ8TBF2 198 aa11.65□□□□□ -0.54
CLN8-204ENST00000519254 RITA1Q96K30 269 aa11.65□□□□□ -0.54
CLN8-204ENST00000519254 TMEM147Q9BVK8 224 aa11.65□□□□□ -0.54
CLN8-204ENST00000519254 FBXO7Q9Y3I1 522 aa11.65□□□□□ -0.54
CLN8-204ENST00000519254 TRAV40A0A0B4J280 105 aa11.64□□□□□ -0.55
CLN8-204ENST00000519254 TEX50A0A1B0GTY4 177 aa11.64□□□□□ -0.55
CLN8-204ENST00000519254 ODF3BA8MYP8 253 aa11.64□□□□□ -0.55
CLN8-204ENST00000519254 HOXA1P49639 335 aaPredicted RBP11.64□□□□□ -0.55
CLN8-204ENST00000519254 RAB13P51153 203 aa11.64□□□□□ -0.55
CLN8-204ENST00000519254 LGALS4P56470 323 aa11.64□□□□□ -0.55
CLN8-204ENST00000519254 RPP30P78346 268 aaKnown RBP11.64□□□□□ -0.55
CLN8-204ENST00000519254 AKR1C1Q04828 323 aa11.64□□□□□ -0.55
CLN8-204ENST00000519254 LDLRAD2Q5SZI1 272 aa11.64□□□□□ -0.55
CLN8-204ENST00000519254 LHFPL4Q7Z7J7 247 aa11.64□□□□□ -0.55
CLN8-204ENST00000519254 TAF15Q92804 592 aaKnown RBP eCLIP11.64□□□□□ -0.55
CLN8-204ENST00000519254 RPEQ96AT9 228 aa11.64□□□□□ -0.55
CLN8-204ENST00000519254 PSMG3Q9BT73 122 aaPredicted RBP11.64□□□□□ -0.55
CLN8-204ENST00000519254 MS4A7Q9GZW8 240 aaPredicted RBP11.64□□□□□ -0.55
CLN8-204ENST00000519254 UQCC1Q9NVA1 299 aa11.64□□□□□ -0.55
CLN8-204ENST00000519254 HILPDAQ9Y5L2 63 aa11.64□□□□□ -0.55
CLN8-204ENST00000519254 IGHV3-72A0A0B4J1Y9 119 aa11.64□□□□□ -0.55
CLN8-204ENST00000519254 IGHV1-3A0A0C4DH29 117 aa11.64□□□□□ -0.55
CLN8-204ENST00000519254 PRSS46E5RG02 174 aa11.64□□□□□ -0.55
CLN8-204ENST00000519254 AGPAT2O15120 278 aa11.64□□□□□ -0.55
CLN8-204ENST00000519254 MDKP21741 143 aaPredicted RBP11.64□□□□□ -0.55
CLN8-204ENST00000519254 GATA3P23771 443 aa11.64□□□□□ -0.55
CLN8-204ENST00000519254 PAX6P26367 422 aa11.64□□□□□ -0.55
CLN8-204ENST00000519254 PRCDQ00LT1 54 aa11.64□□□□□ -0.55
CLN8-204ENST00000519254 TMEM167AQ8TBQ9 72 aa11.64□□□□□ -0.55
CLN8-204ENST00000519254 FKBP11Q9NYL4 201 aa11.64□□□□□ -0.55
CLN8-204ENST00000519254 CENPVL3A0A0U1RRI6 287 aa11.63□□□□□ -0.55
CLN8-204ENST00000519254 TSPAN15O95858 294 aa11.63□□□□□ -0.55
CLN8-204ENST00000519254 OPN1MWP04001 364 aa11.63□□□□□ -0.55
CLN8-204ENST00000519254 OPN1MW2P0DN77 364 aa11.63□□□□□ -0.55
CLN8-204ENST00000519254 OPN1MW3P0DN78 364 aa11.63□□□□□ -0.55
CLN8-204ENST00000519254 UBE2E1P51965 193 aa11.63□□□□□ -0.55
CLN8-204ENST00000519254 AKR1C8PQ5T2L2 129 aa11.63□□□□□ -0.55
CLN8-204ENST00000519254 RUSC1-AS1Q66K80 236 aa11.63□□□□□ -0.55
CLN8-204ENST00000519254 CYB5R2Q6BCY4 276 aa11.63□□□□□ -0.55
CLN8-204ENST00000519254 CENPVQ7Z7K6 275 aaPredicted RBP11.63□□□□□ -0.55
CLN8-204ENST00000519254 CCDC28AQ8IWP9 274 aa11.63□□□□□ -0.55
CLN8-204ENST00000519254 SCRT1Q9BWW7 348 aa11.63□□□□□ -0.55
CLN8-204ENST00000519254 HINT2Q9BX68 163 aa11.63□□□□□ -0.55
CLN8-204ENST00000519254 DPM3Q9P2X0 92 aa11.63□□□□□ -0.55
CLN8-204ENST00000519254 FAM96BQ9Y3D0 163 aa11.63□□□□□ -0.55
CLN8-204ENST00000519254 CCDC168Q8NDH2 2452 aa11.63□□□□□ -0.55
CLN8-204ENST00000519254 SCAF4O95104 1147 aaKnown RBP11.62□□□□□ -0.55
CLN8-204ENST00000519254 SNCAP37840 140 aa11.62□□□□□ -0.55
CLN8-204ENST00000519254 CEACAM3P40198 252 aa11.62□□□□□ -0.55
CLN8-204ENST00000519254 RPL8P62917 257 aaKnown RBP11.62□□□□□ -0.55
CLN8-204ENST00000519254 TPTE2P1Q5T6R2 138 aa11.62□□□□□ -0.55
CLN8-204ENST00000519254 ETV3LQ6ZN32 361 aa11.62□□□□□ -0.55
CLN8-204ENST00000519254 MOB3BQ86TA1 216 aa11.62□□□□□ -0.55
CLN8-204ENST00000519254 OR5B3Q8NH48 314 aa11.62□□□□□ -0.55
CLN8-204ENST00000519254 OR4A5Q8NH83 315 aa11.62□□□□□ -0.55
CLN8-204ENST00000519254 C17orf50Q8WW18 174 aa11.62□□□□□ -0.55
CLN8-204ENST00000519254 TMEM231Q9H6L2 316 aa11.62□□□□□ -0.55
CLN8-204ENST00000519254 VSIRQ9H7M9 311 aa11.62□□□□□ -0.55
CLN8-204ENST00000519254 ENY2Q9NPA8 101 aa11.62□□□□□ -0.55
CLN8-204ENST00000519254 TMEM218A2RU14 115 aa11.62□□□□□ -0.55
CLN8-204ENST00000519254 NPFFO15130 113 aa11.62□□□□□ -0.55
CLN8-204ENST00000519254 AVPP01185 164 aa11.62□□□□□ -0.55
CLN8-204ENST00000519254 CD5P06127 495 aa11.62□□□□□ -0.55
CLN8-204ENST00000519254 SAA4P35542 130 aa11.62□□□□□ -0.55
CLN8-204ENST00000519254 LGALS7P47929 136 aa11.62□□□□□ -0.55
CLN8-204ENST00000519254 SERF2P84101 59 aa11.62□□□□□ -0.55
CLN8-204ENST00000519254 SSX2Q16385 188 aa11.62□□□□□ -0.55
CLN8-204ENST00000519254 MRGPRG-AS1Q2M3A8 158 aa11.62□□□□□ -0.55
CLN8-204ENST00000519254 SPSB3Q6PJ21 355 aa11.62□□□□□ -0.55
CLN8-204ENST00000519254 DPPA3Q6W0C5 159 aa11.62□□□□□ -0.55
CLN8-204ENST00000519254 BRD3OSQ6XYD6 125 aa11.62□□□□□ -0.55
CLN8-204ENST00000519254 COMMD1Q8N668 190 aa11.62□□□□□ -0.55
CLN8-204ENST00000519254 VSTM2AQ8TAG5 236 aa11.62□□□□□ -0.55
CLN8-204ENST00000519254 NARS2Q96I59 477 aaKnown RBP11.62□□□□□ -0.55
CLN8-204ENST00000519254 PLEKHA3Q9HB20 300 aa11.62□□□□□ -0.55
CLN8-204ENST00000519254 RPRMQ9NS64 109 aa11.62□□□□□ -0.55
CLN8-204ENST00000519254 TIMM9Q9Y5J7 89 aa11.62□□□□□ -0.55
CLN8-204ENST00000519254 NAV3Q8IVL0 2385 aa11.61□□□□□ -0.55
CLN8-204ENST00000519254 A0A1W2PPI3 338 aa11.61□□□□□ -0.55
CLN8-204ENST00000519254 E7EUB6 86 aa11.61□□□□□ -0.55
CLN8-204ENST00000519254 SLC25A17O43808 307 aa11.61□□□□□ -0.55
CLN8-204ENST00000519254 CA2P00918 260 aa11.61□□□□□ -0.55
CLN8-204ENST00000519254 IGHV4-38-2P0DP08 117 aa11.61□□□□□ -0.55
CLN8-204ENST00000519254 FGF7P21781 194 aa11.61□□□□□ -0.55
CLN8-204ENST00000519254 NPY1RP25929 384 aa11.61□□□□□ -0.55
CLN8-204ENST00000519254 SLC24A4Q8NFF2 622 aa11.61□□□□□ -0.55
CLN8-204ENST00000519254 ZNF430Q9H8G1 570 aaPredicted RBP11.61□□□□□ -0.55
CLN8-204ENST00000519254 TPSG1Q9NRR2 321 aa11.61□□□□□ -0.55
CLN8-204ENST00000519254 NDUFA4L2Q9NRX3 87 aa11.61□□□□□ -0.55
CLN8-204ENST00000519254 IGHV1-69DA0A0B4J2H0 117 aa11.6□□□□□ -0.55
CLN8-204ENST00000519254 C9JQL5 133 aa11.6□□□□□ -0.55
CLN8-204ENST00000519254 IGHV1-69P01742 117 aa11.6□□□□□ -0.55
CLN8-204ENST00000519254 H2AFB1P0C5Y9 115 aa11.6□□□□□ -0.55
CLN8-204ENST00000519254 CD1BP29016 333 aa11.6□□□□□ -0.55
CLN8-204ENST00000519254 RAB11AP62491 216 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms