RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 SSX9Q7RTT3 188 aa7.29□□□□□ -1.24
NR1I3-230ENST00000511944 PPP1R27Q86WC6 154 aa7.29□□□□□ -1.24
NR1I3-230ENST00000511944 KRTAP1-3Q8IUG1 177 aa7.29□□□□□ -1.24
NR1I3-230ENST00000511944 BAP18Q8IXM2 172 aa7.29□□□□□ -1.24
NR1I3-230ENST00000511944 OR1S2Q8NGQ3 325 aa7.29□□□□□ -1.24
NR1I3-230ENST00000511944 SCARB1Q8WTV0 552 aa7.29□□□□□ -1.24
NR1I3-230ENST00000511944 ST8SIA2Q92186 375 aa7.29□□□□□ -1.24
NR1I3-230ENST00000511944 AJUBAQ96IF1 538 aa7.29□□□□□ -1.24
NR1I3-230ENST00000511944 ZNF471Q9BX82 626 aaPredicted RBP7.29□□□□□ -1.24
NR1I3-230ENST00000511944 MAGT1Q9H0U3 335 aa7.29□□□□□ -1.24
NR1I3-230ENST00000511944 MEGF9Q9H1U4 602 aa7.29□□□□□ -1.24
NR1I3-230ENST00000511944 PLEKHA3Q9HB20 300 aa7.29□□□□□ -1.24
NR1I3-230ENST00000511944 ENY2Q9NPA8 101 aa7.29□□□□□ -1.24
NR1I3-230ENST00000511944 NDUFA4L2Q9NRX3 87 aa7.29□□□□□ -1.24
NR1I3-230ENST00000511944 C1RLQ9NZP8 487 aa7.29□□□□□ -1.24
NR1I3-230ENST00000511944 KIAA1456Q9P272 454 aa7.29□□□□□ -1.24
NR1I3-230ENST00000511944 FBXL17Q9UF56 701 aa7.29□□□□□ -1.24
NR1I3-230ENST00000511944 SIGLEC9Q9Y336 463 aa7.29□□□□□ -1.24
NR1I3-230ENST00000511944 TENM4Q6N022 2769 aa7.29□□□□□ -1.24
NR1I3-230ENST00000511944 PTPN13Q12923 2485 aa7.28□□□□□ -1.24
NR1I3-230ENST00000511944 FBN2P35556 2912 aa7.28□□□□□ -1.24
NR1I3-230ENST00000511944 HELZ2Q9BYK8 2649 aaKnown RBP7.28□□□□□ -1.24
NR1I3-230ENST00000511944 FBP1P09467 338 aa7.28□□□□□ -1.24
NR1I3-230ENST00000511944 OR8U8P0C7N1 319 aa7.28□□□□□ -1.24
NR1I3-230ENST00000511944 IGHV4-31P0DP07 118 aa7.28□□□□□ -1.24
NR1I3-230ENST00000511944 HOXA1P49639 335 aaPredicted RBP7.28□□□□□ -1.24
NR1I3-230ENST00000511944 F2RL1P55085 397 aa7.28□□□□□ -1.24
NR1I3-230ENST00000511944 OR2B8PP59922 312 aa7.28□□□□□ -1.24
NR1I3-230ENST00000511944 RAB11AP62491 216 aa7.28□□□□□ -1.24
NR1I3-230ENST00000511944 SUMO1P63165 101 aaKnown RBP7.28□□□□□ -1.24
NR1I3-230ENST00000511944 LHFPL4Q7Z7J7 247 aa7.28□□□□□ -1.24
NR1I3-230ENST00000511944 VKORC1L1Q8N0U8 176 aa7.28□□□□□ -1.24
NR1I3-230ENST00000511944 ZNF114Q8NC26 417 aa7.28□□□□□ -1.24
NR1I3-230ENST00000511944 GNPNAT1Q96EK6 184 aaPredicted RBP7.28□□□□□ -1.24
NR1I3-230ENST00000511944 ATP5SQ99766 215 aa7.28□□□□□ -1.24
NR1I3-230ENST00000511944 HEYLQ9NQ87 328 aaPredicted RBP7.28□□□□□ -1.24
NR1I3-230ENST00000511944 CYTL1Q9NRR1 136 aa7.28□□□□□ -1.24
NR1I3-230ENST00000511944 HILPDAQ9Y5L2 63 aa7.28□□□□□ -1.24
NR1I3-230ENST00000511944 TRAV3A0A0B4J244 114 aa7.27□□□□□ -1.25
NR1I3-230ENST00000511944 TEX50A0A1B0GTY4 177 aa7.27□□□□□ -1.25
NR1I3-230ENST00000511944 FAM24AA6NFZ4 105 aa7.27□□□□□ -1.25
NR1I3-230ENST00000511944 SLC25A17O43808 307 aa7.27□□□□□ -1.25
NR1I3-230ENST00000511944 MPDU1O75352 247 aa7.27□□□□□ -1.25
NR1I3-230ENST00000511944 ACTL6BO94805 426 aa7.27□□□□□ -1.25
NR1I3-230ENST00000511944 FSHBP01225 129 aa7.27□□□□□ -1.25
NR1I3-230ENST00000511944 SEC11BP0C7V7 166 aa7.27□□□□□ -1.25
NR1I3-230ENST00000511944 IAPPP10997 89 aa7.27□□□□□ -1.25
NR1I3-230ENST00000511944 RAB5CP51148 216 aa7.27□□□□□ -1.25
NR1I3-230ENST00000511944 DLX1P56177 255 aa7.27□□□□□ -1.25
NR1I3-230ENST00000511944 EXOSC2Q13868 293 aaKnown RBP7.27□□□□□ -1.25
NR1I3-230ENST00000511944 MMDQ15546 238 aa7.27□□□□□ -1.25
NR1I3-230ENST00000511944 SSX2Q16385 188 aa7.27□□□□□ -1.25
NR1I3-230ENST00000511944 C5orf64Q2M2E5 130 aa7.27□□□□□ -1.25
NR1I3-230ENST00000511944 VWC2Q2TAL6 325 aa7.27□□□□□ -1.25
NR1I3-230ENST00000511944 C2orf83Q53S99 150 aa7.27□□□□□ -1.25
NR1I3-230ENST00000511944 SPANXN5Q5MJ07 72 aa7.27□□□□□ -1.25
NR1I3-230ENST00000511944 CYB5R2Q6BCY4 276 aa7.27□□□□□ -1.25
NR1I3-230ENST00000511944 C16orf82Q7Z2V1 217 aa7.27□□□□□ -1.25
NR1I3-230ENST00000511944 SLC24A4Q8NFF2 622 aa7.27□□□□□ -1.25
NR1I3-230ENST00000511944 OR10P1Q8NGE3 313 aa7.27□□□□□ -1.25
NR1I3-230ENST00000511944 Q96MF0 132 aa7.27□□□□□ -1.25
NR1I3-230ENST00000511944 GINS3Q9BRX5 216 aa7.27□□□□□ -1.25
NR1I3-230ENST00000511944 SLC25A32Q9H2D1 315 aa7.27□□□□□ -1.25
NR1I3-230ENST00000511944 ZNF430Q9H8G1 570 aaPredicted RBP7.27□□□□□ -1.25
NR1I3-230ENST00000511944 METTL1Q9UBP6 276 aaKnown RBP7.27□□□□□ -1.25
NR1I3-230ENST00000511944 PITPNC1Q9UKF7 332 aa7.27□□□□□ -1.25
NR1I3-230ENST00000511944 YLPM1P49750 1951 aaKnown RBP7.27□□□□□ -1.25
NR1I3-230ENST00000511944 NAV2Q8IVL1 2488 aa7.27□□□□□ -1.25
NR1I3-230ENST00000511944 TRAV40A0A0B4J280 105 aa7.26□□□□□ -1.25
NR1I3-230ENST00000511944 C15orf62A8K5M9 175 aa7.26□□□□□ -1.25
NR1I3-230ENST00000511944 M0QZK8 103 aa7.26□□□□□ -1.25
NR1I3-230ENST00000511944 CORTO00230 105 aa7.26□□□□□ -1.25
NR1I3-230ENST00000511944 FGF16O43320 207 aa7.26□□□□□ -1.25
NR1I3-230ENST00000511944 IFNA5P01569 189 aa7.26□□□□□ -1.25
NR1I3-230ENST00000511944 IGKV1D-33P01593 117 aa7.26□□□□□ -1.25
NR1I3-230ENST00000511944 IGKV1-33P01594 117 aa7.26□□□□□ -1.25
NR1I3-230ENST00000511944 HLA-DRB1P01911 266 aa7.26□□□□□ -1.25
NR1I3-230ENST00000511944 NPY1RP25929 384 aa7.26□□□□□ -1.25
NR1I3-230ENST00000511944 RPL27AP46776 148 aaKnown RBP7.26□□□□□ -1.25
NR1I3-230ENST00000511944 SUB1P53999 127 aaKnown RBP eCLIP7.26□□□□□ -1.25
NR1I3-230ENST00000511944 RAB14P61106 215 aa7.26□□□□□ -1.25
NR1I3-230ENST00000511944 DLK1P80370 383 aa7.26□□□□□ -1.25
NR1I3-230ENST00000511944 ERHP84090 104 aaKnown RBP7.26□□□□□ -1.25
NR1I3-230ENST00000511944 NHLH2Q02577 135 aa7.26□□□□□ -1.25
NR1I3-230ENST00000511944 SLC38A11Q08AI6 406 aa7.26□□□□□ -1.25
NR1I3-230ENST00000511944 CLLU1Q5K131 121 aa7.26□□□□□ -1.25
NR1I3-230ENST00000511944 PVRIGQ6DKI7 326 aa7.26□□□□□ -1.25
NR1I3-230ENST00000511944 ZNF562Q6V9R5 426 aa7.26□□□□□ -1.25
NR1I3-230ENST00000511944 OR1L6Q8NGR2 347 aa7.26□□□□□ -1.25
NR1I3-230ENST00000511944 OR5C1Q8NGR4 320 aa7.26□□□□□ -1.25
NR1I3-230ENST00000511944 RNASEH2CQ8TDP1 164 aaKnown RBP7.26□□□□□ -1.25
NR1I3-230ENST00000511944 OR4C12Q96R67 309 aa7.26□□□□□ -1.25
NR1I3-230ENST00000511944 TMEM147Q9BVK8 224 aa7.26□□□□□ -1.25
NR1I3-230ENST00000511944 ARID1AO14497 2285 aa7.26□□□□□ -1.25
NR1I3-230ENST00000511944 IGHV3-72A0A0B4J1Y9 119 aa7.25□□□□□ -1.25
NR1I3-230ENST00000511944 PMS2P5A8MQ11 134 aa7.25□□□□□ -1.25
NR1I3-230ENST00000511944 UMAD1C9J7I0 102 aa7.25□□□□□ -1.25
NR1I3-230ENST00000511944 PRSS46E5RG02 174 aa7.25□□□□□ -1.25
NR1I3-230ENST00000511944 TRIM77I1YAP6 450 aa7.25□□□□□ -1.25
NR1I3-230ENST00000511944 TGFAP01135 160 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms