RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 RBKSQ9H477 322 aa11.18□□□□□ -0.62
RNF4-208ENST00000507247 LINC00527Q9UJ94 153 aa11.18□□□□□ -0.62
RNF4-208ENST00000507247 DNHD1Q96M86 4753 aa11.18□□□□□ -0.62
RNF4-208ENST00000507247 MSGN1A6NI15 193 aa11.17□□□□□ -0.62
RNF4-208ENST00000507247 FAM90A26D6RGX4 464 aa11.17□□□□□ -0.62
RNF4-208ENST00000507247 KCNAB3O43448 404 aa11.17□□□□□ -0.62
RNF4-208ENST00000507247 SCGB1D2O95969 90 aa11.17□□□□□ -0.62
RNF4-208ENST00000507247 MBPP02686 304 aaPredicted RBP11.17□□□□□ -0.62
RNF4-208ENST00000507247 TRAPPC2P0DI81 140 aa11.17□□□□□ -0.62
RNF4-208ENST00000507247 TRAPPC2BP0DI82 140 aa11.17□□□□□ -0.62
RNF4-208ENST00000507247 NKX2-1P43699 371 aaPredicted RBP11.17□□□□□ -0.62
RNF4-208ENST00000507247 POLR2GP62487 172 aaKnown RBP eCLIP11.17□□□□□ -0.62
RNF4-208ENST00000507247 RAB32Q13637 225 aa11.17□□□□□ -0.62
RNF4-208ENST00000507247 ASPHD1Q5U4P2 390 aa11.17□□□□□ -0.62
RNF4-208ENST00000507247 SGMS2Q8NHU3 365 aa11.17□□□□□ -0.62
RNF4-208ENST00000507247 NOL4LQ96MY1 436 aaPredicted RBP11.17□□□□□ -0.62
RNF4-208ENST00000507247 MAGT1Q9H0U3 335 aa11.17□□□□□ -0.62
RNF4-208ENST00000507247 IGLC7A0M8Q6 106 aa11.16□□□□□ -0.62
RNF4-208ENST00000507247 K7EPK0 472 aa11.16□□□□□ -0.62
RNF4-208ENST00000507247 TSPAN9O75954 239 aa11.16□□□□□ -0.62
RNF4-208ENST00000507247 CRYBA1P05813 215 aa11.16□□□□□ -0.62
RNF4-208ENST00000507247 GIPP09681 153 aaPredicted RBP11.16□□□□□ -0.62
RNF4-208ENST00000507247 AREGP15514 252 aa11.16□□□□□ -0.62
RNF4-208ENST00000507247 CRIP2P52943 208 aaPredicted RBP11.16□□□□□ -0.62
RNF4-208ENST00000507247 CD83Q01151 205 aa11.16□□□□□ -0.62
RNF4-208ENST00000507247 ECSCRQ19T08 205 aa11.16□□□□□ -0.62
RNF4-208ENST00000507247 C19orf54Q5BKX5 351 aa11.16□□□□□ -0.62
RNF4-208ENST00000507247 LFNGQ8NES3 379 aa11.16□□□□□ -0.62
RNF4-208ENST00000507247 RCL1Q9Y2P8 373 aaKnown RBP11.16□□□□□ -0.62
RNF4-208ENST00000507247 CEBPZOSA8MTT3 80 aa11.15□□□□□ -0.62
RNF4-208ENST00000507247 G3V318 75 aa11.15□□□□□ -0.62
RNF4-208ENST00000507247 SYNGR2O43760 224 aa11.15□□□□□ -0.62
RNF4-208ENST00000507247 IGF1P05019 195 aa11.15□□□□□ -0.62
RNF4-208ENST00000507247 REG1AP05451 166 aa11.15□□□□□ -0.62
RNF4-208ENST00000507247 IAPPP10997 89 aa11.15□□□□□ -0.62
RNF4-208ENST00000507247 VDAC2P45880 294 aaPredicted RBP11.15□□□□□ -0.62
RNF4-208ENST00000507247 HOXA1P49639 335 aaPredicted RBP11.15□□□□□ -0.62
RNF4-208ENST00000507247 CYCSP99999 105 aaKnown RBP11.15□□□□□ -0.62
RNF4-208ENST00000507247 WT1-ASQ06250 92 aa11.15□□□□□ -0.62
RNF4-208ENST00000507247 LRRC37A5PQ49AS3 106 aa11.15□□□□□ -0.62
RNF4-208ENST00000507247 ARSJQ5FYB0 599 aaPredicted RBP11.15□□□□□ -0.62
RNF4-208ENST00000507247 C19orf35Q6ZS72 473 aa11.15□□□□□ -0.62
RNF4-208ENST00000507247 PPP1R1CQ8WVI7 109 aa11.15□□□□□ -0.62
RNF4-208ENST00000507247 PLEKHA3Q9HB20 300 aa11.15□□□□□ -0.62
RNF4-208ENST00000507247 SERTAD4Q9NUC0 356 aa11.15□□□□□ -0.62
RNF4-208ENST00000507247 LSM5Q9Y4Y9 91 aaKnown RBP11.15□□□□□ -0.62
RNF4-208ENST00000507247 WSB1Q9Y6I7 421 aa11.15□□□□□ -0.62
RNF4-208ENST00000507247 A0A1W2PN81 502 aa11.14□□□□□ -0.63
RNF4-208ENST00000507247 H0YIZ8 118 aa11.14□□□□□ -0.63
RNF4-208ENST00000507247 AP4M1O00189 453 aa11.14□□□□□ -0.63
RNF4-208ENST00000507247 SSSCA1O60232 199 aa11.14□□□□□ -0.63
RNF4-208ENST00000507247 NDUFA7O95182 113 aa11.14□□□□□ -0.63
RNF4-208ENST00000507247 CHRNA7P36544 502 aa11.14□□□□□ -0.63
RNF4-208ENST00000507247 S100A10P60903 97 aa11.14□□□□□ -0.63
RNF4-208ENST00000507247 Q5BKY6 102 aa11.14□□□□□ -0.63
RNF4-208ENST00000507247 UNQ5815/PRO19632Q6UWF5 114 aa11.14□□□□□ -0.63
RNF4-208ENST00000507247 STPG2Q8N412 459 aa11.14□□□□□ -0.63
RNF4-208ENST00000507247 OR2C3Q8N628 320 aa11.14□□□□□ -0.63
RNF4-208ENST00000507247 DTD1Q8TEA8 209 aa11.14□□□□□ -0.63
RNF4-208ENST00000507247 ST6GAL2Q96JF0 529 aa11.14□□□□□ -0.63
RNF4-208ENST00000507247 C11orf1Q9H5F2 150 aa11.14□□□□□ -0.63
RNF4-208ENST00000507247 C16orf95Q9H693 158 aa11.14□□□□□ -0.63
RNF4-208ENST00000507247 RANGRFQ9HD47 186 aaPredicted RBP11.14□□□□□ -0.63
RNF4-208ENST00000507247 CACFD1Q9UGQ2 172 aa11.14□□□□□ -0.63
RNF4-208ENST00000507247 ZNF580Q9UK33 172 aa11.14□□□□□ -0.63
RNF4-208ENST00000507247 JMJD1CQ15652 2540 aa11.13□□□□□ -0.63
RNF4-208ENST00000507247 TRAV14DV4A0A0A6YYC5 116 aa11.13□□□□□ -0.63
RNF4-208ENST00000507247 TRAV41A0A0B4J266 112 aa11.13□□□□□ -0.63
RNF4-208ENST00000507247 INS-IGF2F8WCM5 200 aa11.13□□□□□ -0.63
RNF4-208ENST00000507247 G3V3Q6 166 aa11.13□□□□□ -0.63
RNF4-208ENST00000507247 WRBO00258 174 aa11.13□□□□□ -0.63
RNF4-208ENST00000507247 MED6O75586 246 aa11.13□□□□□ -0.63
RNF4-208ENST00000507247 MPC2O95563 127 aa11.13□□□□□ -0.63
RNF4-208ENST00000507247 TMEM50AO95807 157 aa11.13□□□□□ -0.63
RNF4-208ENST00000507247 OR13C7P0DN81 318 aa11.13□□□□□ -0.63
RNF4-208ENST00000507247 PAX9P55771 341 aa11.13□□□□□ -0.63
RNF4-208ENST00000507247 RAP2BP61225 183 aa11.13□□□□□ -0.63
RNF4-208ENST00000507247 OR2T6Q8NHC8 308 aa11.13□□□□□ -0.63
RNF4-208ENST00000507247 SRSF8Q9BRL6 282 aaKnown RBP11.13□□□□□ -0.63
RNF4-208ENST00000507247 ENY2Q9NPA8 101 aa11.13□□□□□ -0.63
RNF4-208ENST00000507247 SMLR1H3BR10 107 aa11.12□□□□□ -0.63
RNF4-208ENST00000507247 SOX15O60248 233 aa11.12□□□□□ -0.63
RNF4-208ENST00000507247 DEDDO75618 318 aa11.12□□□□□ -0.63
RNF4-208ENST00000507247 CTRB1P17538 263 aa11.12□□□□□ -0.63
RNF4-208ENST00000507247 PSMB6P28072 239 aa11.12□□□□□ -0.63
RNF4-208ENST00000507247 PPIFP30405 207 aaKnown RBP11.12□□□□□ -0.63
RNF4-208ENST00000507247 CFHR3Q02985 330 aa11.12□□□□□ -0.63
RNF4-208ENST00000507247 CD300CQ08708 224 aa11.12□□□□□ -0.63
RNF4-208ENST00000507247 AKIRIN2Q53H80 203 aa11.12□□□□□ -0.63
RNF4-208ENST00000507247 CTRB2Q6GPI1 263 aa11.12□□□□□ -0.63
RNF4-208ENST00000507247 C10orf99Q6UWK7 81 aa11.12□□□□□ -0.63
RNF4-208ENST00000507247 TTC9CQ8N5M4 171 aa11.12□□□□□ -0.63
RNF4-208ENST00000507247 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.12□□□□□ -0.63
RNF4-208ENST00000507247 OR5T1Q8NG75 326 aa11.12□□□□□ -0.63
RNF4-208ENST00000507247 LINC01006Q8NI28 216 aa11.12□□□□□ -0.63
RNF4-208ENST00000507247 FAM110DQ8TAY7 271 aaPredicted RBP11.12□□□□□ -0.63
RNF4-208ENST00000507247 ASB13Q8WXK3 278 aa11.12□□□□□ -0.63
RNF4-208ENST00000507247 RNF126Q9BV68 326 aa11.12□□□□□ -0.63
RNF4-208ENST00000507247 HEYLQ9NQ87 328 aaPredicted RBP11.12□□□□□ -0.63
RNF4-208ENST00000507247 OR5AC2Q9NZP5 309 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms