RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 FYTTD1Q96QD9 318 aaKnown RBP6.64□□□□□ -1.35
PDGFC-205ENST00000506880 MDFIQ99750 246 aa6.64□□□□□ -1.35
PDGFC-205ENST00000506880 HSPB9Q9BQS6 159 aa6.64□□□□□ -1.35
PDGFC-205ENST00000506880 MARVELD1Q9BSK0 173 aa6.64□□□□□ -1.35
PDGFC-205ENST00000506880 PARP11Q9NR21 331 aa6.64□□□□□ -1.35
PDGFC-205ENST00000506880 TBC1D24Q9ULP9 559 aa6.64□□□□□ -1.35
PDGFC-205ENST00000506880 C9orf170A2RU37 121 aa6.63□□□□□ -1.35
PDGFC-205ENST00000506880 SCGB2A1O75556 95 aa6.63□□□□□ -1.35
PDGFC-205ENST00000506880 HLA-AP01891 365 aaKnown RBP6.63□□□□□ -1.35
PDGFC-205ENST00000506880 H2AFB2P0C5Z0 115 aa6.63□□□□□ -1.35
PDGFC-205ENST00000506880 CTRB1P17538 263 aa6.63□□□□□ -1.35
PDGFC-205ENST00000506880 FCGR2BP31994 310 aaPredicted RBP6.63□□□□□ -1.35
PDGFC-205ENST00000506880 G6PCP35575 357 aa6.63□□□□□ -1.35
PDGFC-205ENST00000506880 RAB9AP51151 201 aa6.63□□□□□ -1.35
PDGFC-205ENST00000506880 LINC00205P59089 165 aa6.63□□□□□ -1.35
PDGFC-205ENST00000506880 RPL23AP62750 156 aaKnown RBP6.63□□□□□ -1.35
PDGFC-205ENST00000506880 RPP30P78346 268 aaKnown RBP6.63□□□□□ -1.35
PDGFC-205ENST00000506880 SSBP2P81877 361 aaPredicted RBP6.63□□□□□ -1.35
PDGFC-205ENST00000506880 DHRS2Q13268 280 aa6.63□□□□□ -1.35
PDGFC-205ENST00000506880 DCTN2Q13561 401 aaKnown RBP6.63□□□□□ -1.35
PDGFC-205ENST00000506880 SMCO1Q147U7 214 aa6.63□□□□□ -1.35
PDGFC-205ENST00000506880 OR2B11Q5JQS5 317 aa6.63□□□□□ -1.35
PDGFC-205ENST00000506880 PRR31Q5SQ13 230 aa6.63□□□□□ -1.35
PDGFC-205ENST00000506880 TMEM268Q5VZI3 342 aa6.63□□□□□ -1.35
PDGFC-205ENST00000506880 CTRB2Q6GPI1 263 aa6.63□□□□□ -1.35
PDGFC-205ENST00000506880 SELENOHQ8IZQ5 122 aaKnown RBP6.63□□□□□ -1.35
PDGFC-205ENST00000506880 ADAD2Q8NCV1 583 aaKnown RBP6.63□□□□□ -1.35
PDGFC-205ENST00000506880 OR1P1Q8NH06 330 aa6.63□□□□□ -1.35
PDGFC-205ENST00000506880 CLCC1Q96S66 551 aa6.63□□□□□ -1.35
PDGFC-205ENST00000506880 OR51B2Q9Y5P1 312 aa6.63□□□□□ -1.35
PDGFC-205ENST00000506880 TRBV7-1A0A0A6YYK4 115 aa6.62□□□□□ -1.35
PDGFC-205ENST00000506880 TCRBV4S1A1TA0A5B7 111 aa6.62□□□□□ -1.35
PDGFC-205ENST00000506880 MSGN1A6NI15 193 aa6.62□□□□□ -1.35
PDGFC-205ENST00000506880 TEX22C9J3V5 150 aa6.62□□□□□ -1.35
PDGFC-205ENST00000506880 FCN1O00602 326 aa6.62□□□□□ -1.35
PDGFC-205ENST00000506880 IGKV1-39P01597 117 aa6.62□□□□□ -1.35
PDGFC-205ENST00000506880 IGKV1-5P01602 117 aa6.62□□□□□ -1.35
PDGFC-205ENST00000506880 IGKV1D-39P04432 117 aa6.62□□□□□ -1.35
PDGFC-205ENST00000506880 PI3P19957 117 aa6.62□□□□□ -1.35
PDGFC-205ENST00000506880 ZP3P21754 424 aa6.62□□□□□ -1.35
PDGFC-205ENST00000506880 VAMP1P23763 118 aa6.62□□□□□ -1.35
PDGFC-205ENST00000506880 PSMB6P28072 239 aa6.62□□□□□ -1.35
PDGFC-205ENST00000506880 MYCNOSP40205 109 aa6.62□□□□□ -1.35
PDGFC-205ENST00000506880 HTR2BP41595 481 aa6.62□□□□□ -1.35
PDGFC-205ENST00000506880 CYCSP99999 105 aaKnown RBP6.62□□□□□ -1.35
PDGFC-205ENST00000506880 NDPQ00604 133 aa6.62□□□□□ -1.35
PDGFC-205ENST00000506880 PPP1R1AQ13522 171 aa6.62□□□□□ -1.35
PDGFC-205ENST00000506880 EXOSC2Q13868 293 aaKnown RBP6.62□□□□□ -1.35
PDGFC-205ENST00000506880 C4orf46Q504U0 113 aa6.62□□□□□ -1.35
PDGFC-205ENST00000506880 FBLN7Q53RD9 439 aa6.62□□□□□ -1.35
PDGFC-205ENST00000506880 PVRIGQ6DKI7 326 aa6.62□□□□□ -1.35
PDGFC-205ENST00000506880 TMED4Q7Z7H5 227 aa6.62□□□□□ -1.35
PDGFC-205ENST00000506880 LFNGQ8NES3 379 aa6.62□□□□□ -1.35
PDGFC-205ENST00000506880 GRPEL2Q8TAA5 225 aa6.62□□□□□ -1.35
PDGFC-205ENST00000506880 VN1R17PQ8TDU5 208 aa6.62□□□□□ -1.35
PDGFC-205ENST00000506880 ZNF431Q8TF32 576 aaPredicted RBP6.62□□□□□ -1.35
PDGFC-205ENST00000506880 ABHD5Q8WTS1 349 aa6.62□□□□□ -1.35
PDGFC-205ENST00000506880 TXN2Q99757 166 aa6.62□□□□□ -1.35
PDGFC-205ENST00000506880 MCRIP2Q9BUT9 160 aaKnown RBP6.62□□□□□ -1.35
PDGFC-205ENST00000506880 PLEKHA3Q9HB20 300 aa6.62□□□□□ -1.35
PDGFC-205ENST00000506880 ENY2Q9NPA8 101 aa6.62□□□□□ -1.35
PDGFC-205ENST00000506880 NUDT15Q9NV35 164 aa6.62□□□□□ -1.35
PDGFC-205ENST00000506880 HSPB7Q9UBY9 170 aa6.62□□□□□ -1.35
PDGFC-205ENST00000506880 U3KQ87 197 aa6.62□□□□□ -1.35
PDGFC-205ENST00000506880 TEX50A0A1B0GTY4 177 aa6.61□□□□□ -1.35
PDGFC-205ENST00000506880 C13orf42A0A1B0GVH6 325 aa6.61□□□□□ -1.35
PDGFC-205ENST00000506880 IGLC7A0M8Q6 106 aa6.61□□□□□ -1.35
PDGFC-205ENST00000506880 DBX1A6NMT0 343 aa6.61□□□□□ -1.35
PDGFC-205ENST00000506880 PITX3O75364 302 aa6.61□□□□□ -1.35
PDGFC-205ENST00000506880 RBMXL2O75526 392 aaKnown RBP6.61□□□□□ -1.35
PDGFC-205ENST00000506880 OR8U8P0C7N1 319 aa6.61□□□□□ -1.35
PDGFC-205ENST00000506880 TAS2R30P59541 319 aa6.61□□□□□ -1.35
PDGFC-205ENST00000506880 PJVKQ0ZLH3 352 aa6.61□□□□□ -1.35
PDGFC-205ENST00000506880 SPSB3Q6PJ21 355 aa6.61□□□□□ -1.35
PDGFC-205ENST00000506880 Q6ZS46 218 aa6.61□□□□□ -1.35
PDGFC-205ENST00000506880 SSX9Q7RTT3 188 aa6.61□□□□□ -1.35
PDGFC-205ENST00000506880 OR2C3Q8N628 320 aa6.61□□□□□ -1.35
PDGFC-205ENST00000506880 SLC35G3Q8N808 338 aa6.61□□□□□ -1.35
PDGFC-205ENST00000506880 ZNF491Q8N8L2 437 aa6.61□□□□□ -1.35
PDGFC-205ENST00000506880 RNASEH2CQ8TDP1 164 aaKnown RBP6.61□□□□□ -1.35
PDGFC-205ENST00000506880 HIPK2Q9H2X6 1198 aa6.61□□□□□ -1.35
PDGFC-205ENST00000506880 TPSG1Q9NRR2 321 aa6.61□□□□□ -1.35
PDGFC-205ENST00000506880 F11RQ9Y624 299 aaKnown RBP6.61□□□□□ -1.35
PDGFC-205ENST00000506880 MGAM2Q2M2H8 2515 aa6.61□□□□□ -1.35
PDGFC-205ENST00000506880 NOTCH3Q9UM47 2321 aa6.61□□□□□ -1.35
PDGFC-205ENST00000506880 A0A0B4J293 547 aa6.6□□□□□ -1.35
PDGFC-205ENST00000506880 RPS10-NUDT3A0A1W2PQS6 291 aa6.6□□□□□ -1.35
PDGFC-205ENST00000506880 IFNA17P01571 189 aa6.6□□□□□ -1.35
PDGFC-205ENST00000506880 LGALS1P09382 135 aaKnown RBP6.6□□□□□ -1.35
PDGFC-205ENST00000506880 DEFA4P12838 97 aa6.6□□□□□ -1.35
PDGFC-205ENST00000506880 SNCAP37840 140 aa6.6□□□□□ -1.35
PDGFC-205ENST00000506880 INSL3P51460 131 aa6.6□□□□□ -1.35
PDGFC-205ENST00000506880 GNB1P62873 340 aa6.6□□□□□ -1.35
PDGFC-205ENST00000506880 TNFRSF9Q07011 255 aa6.6□□□□□ -1.35
PDGFC-205ENST00000506880 FHL3Q13643 280 aa6.6□□□□□ -1.35
PDGFC-205ENST00000506880 TATDN3Q17R31 274 aa6.6□□□□□ -1.35
PDGFC-205ENST00000506880 ECSCRQ19T08 205 aa6.6□□□□□ -1.35
PDGFC-205ENST00000506880 BSXQ3C1V8 233 aa6.6□□□□□ -1.35
PDGFC-205ENST00000506880 ETFRF1Q6IPR1 90 aa6.6□□□□□ -1.35
PDGFC-205ENST00000506880 ZNF343Q6P1L6 599 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms