RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 RETNQ9HD89 108 aa10.82□□□□□ -0.68
CDC42SE2-209ENST00000506419 MLXQ9UH92 298 aa10.82□□□□□ -0.68
CDC42SE2-209ENST00000506419 NSG2Q9Y328 171 aa10.82□□□□□ -0.68
CDC42SE2-209ENST00000506419 TRBV7-1A0A0A6YYK4 115 aa10.81□□□□□ -0.68
CDC42SE2-209ENST00000506419 IGHV3-35A0A0C4DH35 117 aa10.81□□□□□ -0.68
CDC42SE2-209ENST00000506419 DBX1A6NMT0 343 aa10.81□□□□□ -0.68
CDC42SE2-209ENST00000506419 TNFAIP8O95379 198 aa10.81□□□□□ -0.68
CDC42SE2-209ENST00000506419 RLN1P04808 185 aa10.81□□□□□ -0.68
CDC42SE2-209ENST00000506419 TRAPPC2P0DI81 140 aa10.81□□□□□ -0.68
CDC42SE2-209ENST00000506419 TRAPPC2BP0DI82 140 aa10.81□□□□□ -0.68
CDC42SE2-209ENST00000506419 PTBP1P26599 531 aaKnown RBP eCLIP10.81□□□□□ -0.685e-8■■■■■ 27
CDC42SE2-209ENST00000506419 HRH1P35367 487 aa10.81□□□□□ -0.68
CDC42SE2-209ENST00000506419 VBP1P61758 197 aa10.81□□□□□ -0.68
CDC42SE2-209ENST00000506419 GUCA2BQ16661 112 aa10.81□□□□□ -0.68
CDC42SE2-209ENST00000506419 LAX1Q8IWV1 398 aa10.81□□□□□ -0.68
CDC42SE2-209ENST00000506419 OR6F1Q8NGZ6 308 aa10.81□□□□□ -0.68
CDC42SE2-209ENST00000506419 CXorf58Q96LI9 332 aa10.81□□□□□ -0.68
CDC42SE2-209ENST00000506419 SRSF8Q9BRL6 282 aaKnown RBP10.81□□□□□ -0.68
CDC42SE2-209ENST00000506419 QTRT1Q9BXR0 403 aaKnown RBP10.81□□□□□ -0.68
CDC42SE2-209ENST00000506419 HIPK2Q9H2X6 1198 aa10.81□□□□□ -0.68
CDC42SE2-209ENST00000506419 NDUFA4L2Q9NRX3 87 aa10.81□□□□□ -0.68
CDC42SE2-209ENST00000506419 COMMD9Q9P000 198 aa10.81□□□□□ -0.68
CDC42SE2-209ENST00000506419 OR11H12B2RN74 326 aa10.8□□□□□ -0.68
CDC42SE2-209ENST00000506419 GPR31O00270 319 aa10.8□□□□□ -0.68
CDC42SE2-209ENST00000506419 TPPPO94811 219 aa10.8□□□□□ -0.68
CDC42SE2-209ENST00000506419 KRASP01116 189 aa10.8□□□□□ -0.68
CDC42SE2-209ENST00000506419 SERPINE2P07093 398 aa10.8□□□□□ -0.68
CDC42SE2-209ENST00000506419 FGF2P09038 288 aa10.8□□□□□ -0.68
CDC42SE2-209ENST00000506419 C8orf88P0DMB2 117 aa10.8□□□□□ -0.68
CDC42SE2-209ENST00000506419 OR13C7P0DN81 318 aa10.8□□□□□ -0.68
CDC42SE2-209ENST00000506419 ELK1P19419 428 aa10.8□□□□□ -0.68
CDC42SE2-209ENST00000506419 G6PCP35575 357 aa10.8□□□□□ -0.68
CDC42SE2-209ENST00000506419 TAS2R46P59540 309 aa10.8□□□□□ -0.68
CDC42SE2-209ENST00000506419 TMEM61Q8N0U2 210 aa10.8□□□□□ -0.68
CDC42SE2-209ENST00000506419 CADM3Q8N126 398 aa10.8□□□□□ -0.68
CDC42SE2-209ENST00000506419 OR1L8Q8NGR8 309 aa10.8□□□□□ -0.68
CDC42SE2-209ENST00000506419 SLC2A8Q9NY64 477 aa10.8□□□□□ -0.68
CDC42SE2-209ENST00000506419 CEPT1Q9Y6K0 416 aa10.8□□□□□ -0.68
CDC42SE2-209ENST00000506419 IGHV3-21A0A0B4J1V1 117 aa10.79□□□□□ -0.68
CDC42SE2-209ENST00000506419 MARCH11A6NNE9 402 aa10.79□□□□□ -0.68
CDC42SE2-209ENST00000506419 A8MWP6 167 aa10.79□□□□□ -0.68
CDC42SE2-209ENST00000506419 HPGDSO60760 199 aa10.79□□□□□ -0.68
CDC42SE2-209ENST00000506419 APOA1P02647 267 aa10.79□□□□□ -0.68
CDC42SE2-209ENST00000506419 GPR183P32249 361 aa10.79□□□□□ -0.68
CDC42SE2-209ENST00000506419 PHLDA2Q53GA4 152 aa10.79□□□□□ -0.68
CDC42SE2-209ENST00000506419 ZNF57Q68EA5 555 aaPredicted RBP10.79□□□□□ -0.68
CDC42SE2-209ENST00000506419 SLC25A24Q6NUK1 477 aa10.79□□□□□ -0.68
CDC42SE2-209ENST00000506419 SNX29P2Q8IUI4 249 aa10.79□□□□□ -0.68
CDC42SE2-209ENST00000506419 GDPD1Q8N9F7 314 aa10.79□□□□□ -0.68
CDC42SE2-209ENST00000506419 BORCS5Q969J3 196 aa10.79□□□□□ -0.68
CDC42SE2-209ENST00000506419 CMTM3Q96MX0 182 aa10.79□□□□□ -0.68
CDC42SE2-209ENST00000506419 NAA50Q9GZZ1 169 aaKnown RBP10.79□□□□□ -0.68
CDC42SE2-209ENST00000506419 VCX3AQ9NNX9 186 aa10.79□□□□□ -0.68
CDC42SE2-209ENST00000506419 OR51B2Q9Y5P1 312 aa10.79□□□□□ -0.68
CDC42SE2-209ENST00000506419 F8W735 103 aaPredicted RBP10.78□□□□□ -0.68
CDC42SE2-209ENST00000506419 IGKV1-39P01597 117 aa10.78□□□□□ -0.68
CDC42SE2-209ENST00000506419 IGKV1D-39P04432 117 aa10.78□□□□□ -0.68
CDC42SE2-209ENST00000506419 IFNA6P05013 189 aa10.78□□□□□ -0.68
CDC42SE2-209ENST00000506419 ERVK-16P61578 105 aa10.78□□□□□ -0.68
CDC42SE2-209ENST00000506419 PLET1Q6UQ28 207 aa10.78□□□□□ -0.68
CDC42SE2-209ENST00000506419 CMTM1Q8IZ96 169 aa10.78□□□□□ -0.68
CDC42SE2-209ENST00000506419 VN1R17PQ8TDU5 208 aa10.78□□□□□ -0.68
CDC42SE2-209ENST00000506419 ZNF414Q96IQ9 312 aa10.78□□□□□ -0.68
CDC42SE2-209ENST00000506419 FAM110AQ9BQ89 295 aa10.78□□□□□ -0.68
CDC42SE2-209ENST00000506419 HINT2Q9BX68 163 aa10.78□□□□□ -0.68
CDC42SE2-209ENST00000506419 ZNF436Q9C0F3 470 aaPredicted RBP10.78□□□□□ -0.68
CDC42SE2-209ENST00000506419 SRD5A3Q9H8P0 318 aa10.78□□□□□ -0.68
CDC42SE2-209ENST00000506419 SMIM31A0A1B0GVY4 71 aa10.77□□□□□ -0.69
CDC42SE2-209ENST00000506419 TGOLN2O43493 480 aa10.77□□□□□ -0.69
CDC42SE2-209ENST00000506419 SCAF4O95104 1147 aaKnown RBP10.77□□□□□ -0.69
CDC42SE2-209ENST00000506419 TSPAN5P62079 268 aa10.77□□□□□ -0.69
CDC42SE2-209ENST00000506419 THOC7Q6I9Y2 204 aaKnown RBP10.77□□□□□ -0.69
CDC42SE2-209ENST00000506419 BTNL8Q6UX41 500 aa10.77□□□□□ -0.69
CDC42SE2-209ENST00000506419 TBC1D26Q86UD7 250 aa10.77□□□□□ -0.69
CDC42SE2-209ENST00000506419 SCARB1Q8WTV0 552 aa10.77□□□□□ -0.69
CDC42SE2-209ENST00000506419 ISOC1Q96CN7 298 aa10.77□□□□□ -0.69
CDC42SE2-209ENST00000506419 CHRDL1Q9BU40 450 aa10.77□□□□□ -0.69
CDC42SE2-209ENST00000506419 SCPEP1Q9HB40 452 aa10.77□□□□□ -0.69
CDC42SE2-209ENST00000506419 PALMDQ9NP74 551 aa10.77□□□□□ -0.69
CDC42SE2-209ENST00000506419 THYN1Q9P016 225 aa10.77□□□□□ -0.69
CDC42SE2-209ENST00000506419 F11RQ9Y624 299 aaKnown RBP10.77□□□□□ -0.69
CDC42SE2-209ENST00000506419 BIRC6Q9NR09 4857 aa10.77□□□□□ -0.69
CDC42SE2-209ENST00000506419 OR2T8A6NH00 312 aa10.76□□□□□ -0.69
CDC42SE2-209ENST00000506419 K7EIM0 57 aa10.76□□□□□ -0.69
CDC42SE2-209ENST00000506419 SNAPC5O75971 98 aa10.76□□□□□ -0.69
CDC42SE2-209ENST00000506419 RORCP51449 518 aa10.76□□□□□ -0.69
CDC42SE2-209ENST00000506419 UCP3P55916 312 aa10.76□□□□□ -0.69
CDC42SE2-209ENST00000506419 CTF1Q16619 201 aa10.76□□□□□ -0.69
CDC42SE2-209ENST00000506419 HSD17B13Q7Z5P4 300 aaPredicted RBP10.76□□□□□ -0.69
CDC42SE2-209ENST00000506419 LSM10Q969L4 123 aaKnown RBP10.76□□□□□ -0.69
CDC42SE2-209ENST00000506419 SEC22AQ96IW7 307 aa10.76□□□□□ -0.69
CDC42SE2-209ENST00000506419 TMEM14BQ9NUH8 114 aa10.76□□□□□ -0.69
CDC42SE2-209ENST00000506419 MRPL27Q9P0M9 148 aaKnown RBP10.76□□□□□ -0.69
CDC42SE2-209ENST00000506419 ALMS1Q8TCU4 4167 aa10.75□□□□□ -0.69
CDC42SE2-209ENST00000506419 M0QYG6 137 aa10.75□□□□□ -0.69
CDC42SE2-209ENST00000506419 SMIM18P0DKX4 95 aa10.75□□□□□ -0.69
CDC42SE2-209ENST00000506419 RCVRNP35243 200 aa10.75□□□□□ -0.69
CDC42SE2-209ENST00000506419 ADMP35318 185 aa10.75□□□□□ -0.69
CDC42SE2-209ENST00000506419 ELLP55199 621 aaPredicted RBP10.75□□□□□ -0.69
CDC42SE2-209ENST00000506419 LPCAT3Q6P1A2 487 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms