RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 TNFAIP8O95379 198 aa17.02■□□□□ 0.32
CDC42SE2-207ENST00000504701 PRSS3P35030 304 aa17.02■□□□□ 0.32
CDC42SE2-207ENST00000504701 G6PCP35575 357 aa17.02■□□□□ 0.32
CDC42SE2-207ENST00000504701 PHLDA2Q53GA4 152 aa17.02■□□□□ 0.32
CDC42SE2-207ENST00000504701 AIFM2Q9BRQ8 373 aa17.02■□□□□ 0.32
CDC42SE2-207ENST00000504701 QTRT1Q9BXR0 403 aaKnown RBP17.02■□□□□ 0.32
CDC42SE2-207ENST00000504701 PALMDQ9NP74 551 aa17.02■□□□□ 0.32
CDC42SE2-207ENST00000504701 COMMD9Q9P000 198 aa17.02■□□□□ 0.32
CDC42SE2-207ENST00000504701 DBX1A6NMT0 343 aa17.01■□□□□ 0.31
CDC42SE2-207ENST00000504701 MARCH11A6NNE9 402 aa17.01■□□□□ 0.31
CDC42SE2-207ENST00000504701 TPPPO94811 219 aa17.01■□□□□ 0.31
CDC42SE2-207ENST00000504701 KRASP01116 189 aa17.01■□□□□ 0.31
CDC42SE2-207ENST00000504701 OR13C7P0DN81 318 aa17.01■□□□□ 0.31
CDC42SE2-207ENST00000504701 F2RP25116 425 aa17.01■□□□□ 0.31
CDC42SE2-207ENST00000504701 BTNL8Q6UX41 500 aa17.01■□□□□ 0.31
CDC42SE2-207ENST00000504701 SNX29P2Q8IUI4 249 aa17.01■□□□□ 0.31
CDC42SE2-207ENST00000504701 UXS1Q8NBZ7 420 aa17.01■□□□□ 0.31
CDC42SE2-207ENST00000504701 GPX8Q8TED1 209 aa17.01■□□□□ 0.31
CDC42SE2-207ENST00000504701 ISOC1Q96CN7 298 aa17.01■□□□□ 0.31
CDC42SE2-207ENST00000504701 NAA50Q9GZZ1 169 aaKnown RBP17.01■□□□□ 0.31
CDC42SE2-207ENST00000504701 HIPK2Q9H2X6 1198 aa17.01■□□□□ 0.31
CDC42SE2-207ENST00000504701 SRD5A3Q9H8P0 318 aa17.01■□□□□ 0.31
CDC42SE2-207ENST00000504701 A8MWP6 167 aa17■□□□□ 0.31
CDC42SE2-207ENST00000504701 OR11H12B2RN74 326 aa17■□□□□ 0.31
CDC42SE2-207ENST00000504701 HPGDSO60760 199 aa17■□□□□ 0.31
CDC42SE2-207ENST00000504701 SCAF4O95104 1147 aaKnown RBP17■□□□□ 0.31
CDC42SE2-207ENST00000504701 TAS2R46P59540 309 aa17■□□□□ 0.31
CDC42SE2-207ENST00000504701 RNASE12Q5GAN4 147 aaKnown RBP17■□□□□ 0.31
CDC42SE2-207ENST00000504701 LAX1Q8IWV1 398 aa17■□□□□ 0.31
CDC42SE2-207ENST00000504701 CD300LFQ8TDQ1 290 aa17■□□□□ 0.31
CDC42SE2-207ENST00000504701 DGCR14Q96DF8 476 aaKnown RBP17■□□□□ 0.31
CDC42SE2-207ENST00000504701 HINT2Q9BX68 163 aa17■□□□□ 0.31
CDC42SE2-207ENST00000504701 VCX3AQ9NNX9 186 aa17■□□□□ 0.31
CDC42SE2-207ENST00000504701 SLC2A8Q9NY64 477 aa17■□□□□ 0.31
CDC42SE2-207ENST00000504701 TECRQ9NZ01 308 aaKnown RBP17■□□□□ 0.31
CDC42SE2-207ENST00000504701 TRBV7-1A0A0A6YYK4 115 aa16.99■□□□□ 0.31
CDC42SE2-207ENST00000504701 TRAPPC2P0DI81 140 aa16.99■□□□□ 0.31
CDC42SE2-207ENST00000504701 TRAPPC2BP0DI82 140 aa16.99■□□□□ 0.31
CDC42SE2-207ENST00000504701 ELK1P19419 428 aa16.99■□□□□ 0.31
CDC42SE2-207ENST00000504701 ERVK-16P61578 105 aa16.99■□□□□ 0.31
CDC42SE2-207ENST00000504701 FAM106AQ4KMX7 169 aa16.99■□□□□ 0.31
CDC42SE2-207ENST00000504701 GDPD1Q8N9F7 314 aa16.99■□□□□ 0.31
CDC42SE2-207ENST00000504701 CXorf58Q96LI9 332 aa16.99■□□□□ 0.31
CDC42SE2-207ENST00000504701 NDUFA4L2Q9NRX3 87 aa16.99■□□□□ 0.31
CDC42SE2-207ENST00000504701 GPR31O00270 319 aa16.98■□□□□ 0.31
CDC42SE2-207ENST00000504701 SERPINE2P07093 398 aa16.98■□□□□ 0.31
CDC42SE2-207ENST00000504701 ZNF57Q68EA5 555 aaPredicted RBP16.98■□□□□ 0.31
CDC42SE2-207ENST00000504701 OR6F1Q8NGZ6 308 aa16.98■□□□□ 0.31
CDC42SE2-207ENST00000504701 IGHV3OR16-8A0A075B7F1 116 aa16.97■□□□□ 0.31
CDC42SE2-207ENST00000504701 OR2T8A6NH00 312 aa16.97■□□□□ 0.31
CDC42SE2-207ENST00000504701 SLC25A24Q6NUK1 477 aa16.97■□□□□ 0.31
CDC42SE2-207ENST00000504701 OR1L8Q8NGR8 309 aa16.97■□□□□ 0.31
CDC42SE2-207ENST00000504701 SRSF8Q9BRL6 282 aaKnown RBP16.97■□□□□ 0.31
CDC42SE2-207ENST00000504701 OR51B2Q9Y5P1 312 aa16.97■□□□□ 0.31
CDC42SE2-207ENST00000504701 F8W735 103 aaPredicted RBP16.96■□□□□ 0.31
CDC42SE2-207ENST00000504701 M0QYG6 137 aa16.96■□□□□ 0.31
CDC42SE2-207ENST00000504701 TGOLN2O43493 480 aa16.96■□□□□ 0.31
CDC42SE2-207ENST00000504701 IGKV1-39P01597 117 aa16.96■□□□□ 0.31
CDC42SE2-207ENST00000504701 APOA1P02647 267 aa16.96■□□□□ 0.31
CDC42SE2-207ENST00000504701 IGKV1D-39P04432 117 aa16.96■□□□□ 0.31
CDC42SE2-207ENST00000504701 PTBP1P26599 531 aaKnown RBP eCLIP16.96■□□□□ 0.315e-8■■■■■ 27
CDC42SE2-207ENST00000504701 PLET1Q6UQ28 207 aa16.96■□□□□ 0.31
CDC42SE2-207ENST00000504701 BORCS5Q969J3 196 aa16.96■□□□□ 0.31
CDC42SE2-207ENST00000504701 ZNF414Q96IQ9 312 aa16.96■□□□□ 0.31
CDC42SE2-207ENST00000504701 CHRDL1Q9BU40 450 aa16.96■□□□□ 0.31
CDC42SE2-207ENST00000504701 SMIM18P0DKX4 95 aa16.95■□□□□ 0.3
CDC42SE2-207ENST00000504701 TBC1D26Q86UD7 250 aa16.95■□□□□ 0.3
CDC42SE2-207ENST00000504701 CMTM1Q8IZ96 169 aa16.95■□□□□ 0.3
CDC42SE2-207ENST00000504701 ZNF436Q9C0F3 470 aaPredicted RBP16.95■□□□□ 0.3
CDC42SE2-207ENST00000504701 F11RQ9Y624 299 aaKnown RBP16.95■□□□□ 0.3
CDC42SE2-207ENST00000504701 IFNA6P05013 189 aa16.94■□□□□ 0.3
CDC42SE2-207ENST00000504701 FGF2P09038 288 aa16.94■□□□□ 0.3
CDC42SE2-207ENST00000504701 C8orf88P0DMB2 117 aa16.94■□□□□ 0.3
CDC42SE2-207ENST00000504701 TSPAN5P62079 268 aa16.94■□□□□ 0.3
CDC42SE2-207ENST00000504701 OR52B4Q8NGK2 314 aa16.94■□□□□ 0.3
CDC42SE2-207ENST00000504701 LSM10Q969L4 123 aaKnown RBP16.94■□□□□ 0.3
CDC42SE2-207ENST00000504701 LCE6AA0A183 80 aa16.93■□□□□ 0.3
CDC42SE2-207ENST00000504701 K7EIM0 57 aa16.93■□□□□ 0.3
CDC42SE2-207ENST00000504701 ZNF207O43670 478 aaKnown RBP16.93■□□□□ 0.3
CDC42SE2-207ENST00000504701 ADMP35318 185 aa16.93■□□□□ 0.3
CDC42SE2-207ENST00000504701 IZUMO4Q1ZYL8 232 aa16.93■□□□□ 0.3
CDC42SE2-207ENST00000504701 VN1R17PQ8TDU5 208 aa16.93■□□□□ 0.3
CDC42SE2-207ENST00000504701 SCARB1Q8WTV0 552 aa16.93■□□□□ 0.3
CDC42SE2-207ENST00000504701 TMEM190Q8WZ59 177 aa16.93■□□□□ 0.3
CDC42SE2-207ENST00000504701 DNAH1Q9P2D7 4330 aa16.92■□□□□ 0.3
CDC42SE2-207ENST00000504701 C15orf61A6NNL5 157 aa16.92■□□□□ 0.3
CDC42SE2-207ENST00000504701 SNAPC5O75971 98 aa16.92■□□□□ 0.3
CDC42SE2-207ENST00000504701 RCVRNP35243 200 aa16.92■□□□□ 0.3
CDC42SE2-207ENST00000504701 THOC7Q6I9Y2 204 aaKnown RBP16.92■□□□□ 0.3
CDC42SE2-207ENST00000504701 UBAC2Q8NBM4 344 aa16.92■□□□□ 0.3
CDC42SE2-207ENST00000504701 SEC22AQ96IW7 307 aa16.92■□□□□ 0.3
CDC42SE2-207ENST00000504701 SCPEP1Q9HB40 452 aa16.92■□□□□ 0.3
CDC42SE2-207ENST00000504701 TMEM14BQ9NUH8 114 aa16.92■□□□□ 0.3
CDC42SE2-207ENST00000504701 THYN1Q9P016 225 aa16.92■□□□□ 0.3
CDC42SE2-207ENST00000504701 SMIM31A0A1B0GVY4 71 aa16.91■□□□□ 0.3
CDC42SE2-207ENST00000504701 PI3P19957 117 aa16.91■□□□□ 0.3
CDC42SE2-207ENST00000504701 CTF1Q16619 201 aa16.91■□□□□ 0.3
CDC42SE2-207ENST00000504701 SLC16A13Q7RTY0 426 aa16.91■□□□□ 0.3
CDC42SE2-207ENST00000504701 MRGPRFQ96AM1 343 aa16.91■□□□□ 0.3
CDC42SE2-207ENST00000504701 C21orf62Q9NYP8 219 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms