RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 HSD17B13Q7Z5P4 300 aaPredicted RBP10.31□□□□□ -0.76
PRPF40A-211ENST00000493468 MFSD4AQ8N468 514 aa10.31□□□□□ -0.76
PRPF40A-211ENST00000493468 RHPN1-AS1Q9BWJ2 59 aa10.31□□□□□ -0.76
PRPF40A-211ENST00000493468 FKBP14Q9NWM8 211 aa10.31□□□□□ -0.76
PRPF40A-211ENST00000493468 IGKV1D-13A0A0B4J2D9 117 aa10.3□□□□□ -0.76
PRPF40A-211ENST00000493468 ZNF705EA8MWA4 302 aaPredicted RBP10.3□□□□□ -0.76
PRPF40A-211ENST00000493468 J3QRK9 145 aa10.3□□□□□ -0.76
PRPF40A-211ENST00000493468 RAB27BO00194 218 aa10.3□□□□□ -0.76
PRPF40A-211ENST00000493468 ZNF207O43670 478 aaKnown RBP10.3□□□□□ -0.76
PRPF40A-211ENST00000493468 ARL6IP5O75915 188 aa10.3□□□□□ -0.76
PRPF40A-211ENST00000493468 DFFBO76075 338 aa10.3□□□□□ -0.76
PRPF40A-211ENST00000493468 CD5P06127 495 aa10.3□□□□□ -0.76
PRPF40A-211ENST00000493468 IGKV1-13P0DP09 117 aa10.3□□□□□ -0.76
PRPF40A-211ENST00000493468 TALDO1P37837 337 aa10.3□□□□□ -0.76
PRPF40A-211ENST00000493468 TFPI2P48307 235 aa10.3□□□□□ -0.76
PRPF40A-211ENST00000493468 POU2AF1Q16633 256 aa10.3□□□□□ -0.76
PRPF40A-211ENST00000493468 SOHLH1Q5JUK2 328 aa10.3□□□□□ -0.76
PRPF40A-211ENST00000493468 LAIR2Q6ISS4 152 aa10.3□□□□□ -0.76
PRPF40A-211ENST00000493468 TMEM116Q8NCL8 245 aa10.3□□□□□ -0.76
PRPF40A-211ENST00000493468 CYGBQ8WWM9 190 aa10.3□□□□□ -0.76
PRPF40A-211ENST00000493468 OR10C1Q96KK4 312 aa10.3□□□□□ -0.76
PRPF40A-211ENST00000493468 CMTM3Q96MX0 182 aa10.3□□□□□ -0.76
PRPF40A-211ENST00000493468 QTRT1Q9BXR0 403 aaKnown RBP10.3□□□□□ -0.76
PRPF40A-211ENST00000493468 COMMD5Q9GZQ3 224 aa10.3□□□□□ -0.76
PRPF40A-211ENST00000493468 HRASLSQ9HDD0 168 aa10.3□□□□□ -0.76
PRPF40A-211ENST00000493468 C21orf62Q9NYP8 219 aa10.3□□□□□ -0.76
PRPF40A-211ENST00000493468 SPATA2Q9UM82 520 aa10.3□□□□□ -0.76
PRPF40A-211ENST00000493468 LSM2Q9Y333 95 aaKnown RBP10.3□□□□□ -0.76
PRPF40A-211ENST00000493468 IGHV3OR16-8A0A075B7F1 116 aa10.29□□□□□ -0.76
PRPF40A-211ENST00000493468 RBFOX2O43251 390 aaKnown RBP eCLIP10.29□□□□□ -0.762e-9■■■■■ 32.3
PRPF40A-211ENST00000493468 SERPINE2P07093 398 aa10.29□□□□□ -0.76
PRPF40A-211ENST00000493468 NFYAP23511 347 aaPredicted RBP10.29□□□□□ -0.76
PRPF40A-211ENST00000493468 PAFAH1B2P68402 229 aa10.29□□□□□ -0.76
PRPF40A-211ENST00000493468 MSMO1Q15800 293 aa10.29□□□□□ -0.76
PRPF40A-211ENST00000493468 TMEM91Q6ZNR0 172 aa10.29□□□□□ -0.76
PRPF40A-211ENST00000493468 ZNF414Q96IQ9 312 aa10.29□□□□□ -0.76
PRPF40A-211ENST00000493468 NDUFAF3Q9BU61 184 aa10.29□□□□□ -0.76
PRPF40A-211ENST00000493468 S100A14Q9HCY8 104 aa10.29□□□□□ -0.76
PRPF40A-211ENST00000493468 TAS2R8Q9NYW2 309 aa10.29□□□□□ -0.76
PRPF40A-211ENST00000493468 A0A075B6Q4 140 aa10.28□□□□□ -0.76
PRPF40A-211ENST00000493468 ELOA3CA0A087WX78 387 aaPredicted RBP10.28□□□□□ -0.76
PRPF40A-211ENST00000493468 DEFB131BA0A096LNP1 70 aa10.28□□□□□ -0.76
PRPF40A-211ENST00000493468 TRAV2A0A0B4J234 112 aa10.28□□□□□ -0.76
PRPF40A-211ENST00000493468 UPK2O00526 184 aa10.28□□□□□ -0.76
PRPF40A-211ENST00000493468 CD74P04233 296 aa10.28□□□□□ -0.76
PRPF40A-211ENST00000493468 GIG44P09565 113 aaPredicted RBP10.28□□□□□ -0.76
PRPF40A-211ENST00000493468 RAB6AP20340 208 aa10.28□□□□□ -0.76
PRPF40A-211ENST00000493468 TAS2R31P59538 309 aa10.28□□□□□ -0.76
PRPF40A-211ENST00000493468 RELQ04864 619 aaPredicted RBP10.28□□□□□ -0.76
PRPF40A-211ENST00000493468 ARL6IP1Q15041 203 aa10.28□□□□□ -0.76
PRPF40A-211ENST00000493468 SPHARQ15513 63 aa10.28□□□□□ -0.76
PRPF40A-211ENST00000493468 MAPKAPK5-AS1Q8N8E1 139 aa10.28□□□□□ -0.76
PRPF40A-211ENST00000493468 SCARB1Q8WTV0 552 aa10.28□□□□□ -0.76
PRPF40A-211ENST00000493468 DGCR14Q96DF8 476 aaKnown RBP10.28□□□□□ -0.76
PRPF40A-211ENST00000493468 V9GY05 133 aa10.28□□□□□ -0.76
PRPF40A-211ENST00000493468 X6R8D5 127 aa10.28□□□□□ -0.76
PRPF40A-211ENST00000493468 AGRNO00468 2067 aa10.28□□□□□ -0.76
PRPF40A-211ENST00000493468 CTSGP08311 255 aa10.27□□□□□ -0.77
PRPF40A-211ENST00000493468 SPP1P10451 314 aa10.27□□□□□ -0.77
PRPF40A-211ENST00000493468 WT1-ASQ06250 92 aa10.27□□□□□ -0.77
PRPF40A-211ENST00000493468 TRAM1Q15629 374 aa10.27□□□□□ -0.77
PRPF40A-211ENST00000493468 SLC25A24Q6NUK1 477 aa10.27□□□□□ -0.77
PRPF40A-211ENST00000493468 MORN3Q6PF18 240 aaPredicted RBP10.27□□□□□ -0.77
PRPF40A-211ENST00000493468 OR10W1Q8NGF6 305 aa10.27□□□□□ -0.77
PRPF40A-211ENST00000493468 UFD1Q92890 307 aa10.27□□□□□ -0.77
PRPF40A-211ENST00000493468 DCSTAMPQ9H295 470 aa10.27□□□□□ -0.77
PRPF40A-211ENST00000493468 F11RQ9Y624 299 aaKnown RBP10.27□□□□□ -0.77
PRPF40A-211ENST00000493468 IGKV3-7A0A075B6H7 116 aa10.26□□□□□ -0.77
PRPF40A-211ENST00000493468 TRAV3A0A0B4J244 114 aa10.26□□□□□ -0.77
PRPF40A-211ENST00000493468 K7EIM0 57 aa10.26□□□□□ -0.77
PRPF40A-211ENST00000493468 OR13C7P0DN81 318 aa10.26□□□□□ -0.77
PRPF40A-211ENST00000493468 NQO2P16083 231 aa10.26□□□□□ -0.77
PRPF40A-211ENST00000493468 PSMA1P25786 263 aaKnown RBP10.26□□□□□ -0.77
PRPF40A-211ENST00000493468 DEFB131AP59861 70 aa10.26□□□□□ -0.77
PRPF40A-211ENST00000493468 C12orf74Q32Q52 190 aa10.26□□□□□ -0.77
PRPF40A-211ENST00000493468 HES5Q5TA89 166 aa10.26□□□□□ -0.77
PRPF40A-211ENST00000493468 CNIH2Q6PI25 160 aa10.26□□□□□ -0.77
PRPF40A-211ENST00000493468 ZNF773Q6PK81 442 aa10.26□□□□□ -0.77
PRPF40A-211ENST00000493468 TRPT1Q86TN4 253 aaKnown RBP10.26□□□□□ -0.77
PRPF40A-211ENST00000493468 STHQ8IWL8 128 aa10.26□□□□□ -0.77
PRPF40A-211ENST00000493468 C8orf59Q8N0T1 100 aaPredicted RBP10.26□□□□□ -0.77
PRPF40A-211ENST00000493468 SPAG16Q8N0X2 631 aa10.26□□□□□ -0.77
PRPF40A-211ENST00000493468 GBGT1Q8N5D6 347 aa10.26□□□□□ -0.77
PRPF40A-211ENST00000493468 DHRSXQ8N5I4 330 aa10.26□□□□□ -0.77
PRPF40A-211ENST00000493468 GIMAP1Q8WWP7 306 aa10.26□□□□□ -0.77
PRPF40A-211ENST00000493468 TMEM203Q969S6 136 aa10.26□□□□□ -0.77
PRPF40A-211ENST00000493468 C8orf4Q9NR00 106 aa10.26□□□□□ -0.77
PRPF40A-211ENST00000493468 APOBP04114 4563 aaKnown RBP10.26□□□□□ -0.77
PRPF40A-211ENST00000493468 TRAV14DV4A0A0A6YYC5 116 aa10.25□□□□□ -0.77
PRPF40A-211ENST00000493468 METTL21EPA6NDL7 271 aa10.25□□□□□ -0.77
PRPF40A-211ENST00000493468 NUPL2O15504 423 aaKnown RBP10.25□□□□□ -0.77
PRPF40A-211ENST00000493468 HPRT1P00492 218 aa10.25□□□□□ -0.77
PRPF40A-211ENST00000493468 TRAPPC2P0DI81 140 aa10.25□□□□□ -0.77
PRPF40A-211ENST00000493468 TRAPPC2BP0DI82 140 aa10.25□□□□□ -0.77
PRPF40A-211ENST00000493468 CALRP27797 417 aaKnown RBP10.25□□□□□ -0.77
PRPF40A-211ENST00000493468 Q56UQ5 140 aa10.25□□□□□ -0.77
PRPF40A-211ENST00000493468 LEMD1Q68G75 181 aa10.25□□□□□ -0.77
PRPF40A-211ENST00000493468 Q6ZRM9 215 aa10.25□□□□□ -0.77
PRPF40A-211ENST00000493468 TCF24Q7RTU0 167 aa10.25□□□□□ -0.77
PRPF40A-211ENST00000493468 PACRGLQ8N7B6 248 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms