RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 HIST2H2BEQ16778 126 aa11.49□□□□□ -0.57
UBXN11-214ENST00000475591 C4orf17Q53FE4 359 aa11.49□□□□□ -0.57
UBXN11-214ENST00000475591 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.49□□□□□ -0.57
UBXN11-214ENST00000475591 HIST1H2BHQ93079 126 aa11.49□□□□□ -0.57
UBXN11-214ENST00000475591 HIST1H2BNQ99877 126 aa11.49□□□□□ -0.57
UBXN11-214ENST00000475591 HIST1H2BMQ99879 126 aa11.49□□□□□ -0.57
UBXN11-214ENST00000475591 GGACTQ9BVM4 153 aa11.49□□□□□ -0.57
UBXN11-214ENST00000475591 NPVFQ9HCQ7 196 aa11.49□□□□□ -0.57
UBXN11-214ENST00000475591 TMEM242Q9NWH2 141 aa11.49□□□□□ -0.57
UBXN11-214ENST00000475591 TNCP24821 2201 aa11.49□□□□□ -0.57
UBXN11-214ENST00000475591 DCHS2Q6V1P9 2916 aa11.48□□□□□ -0.57
UBXN11-214ENST00000475591 IFITM10A6NMD0 228 aa11.48□□□□□ -0.57
UBXN11-214ENST00000475591 UPK2O00526 184 aa11.48□□□□□ -0.57
UBXN11-214ENST00000475591 MPDU1O75352 247 aa11.48□□□□□ -0.57
UBXN11-214ENST00000475591 LY86O95711 162 aa11.48□□□□□ -0.57
UBXN11-214ENST00000475591 IL6RP08887 468 aaPredicted RBP11.48□□□□□ -0.57
UBXN11-214ENST00000475591 IGFBP2P18065 325 aa11.48□□□□□ -0.57
UBXN11-214ENST00000475591 GNB1P62873 340 aa11.48□□□□□ -0.57
UBXN11-214ENST00000475591 POU2AF1Q16633 256 aa11.48□□□□□ -0.57
UBXN11-214ENST00000475591 RTL8BQ17RB0 113 aa11.48□□□□□ -0.57
UBXN11-214ENST00000475591 OR10W1Q8NGF6 305 aa11.48□□□□□ -0.57
UBXN11-214ENST00000475591 RNASE6Q93091 150 aaKnown RBP11.48□□□□□ -0.57
UBXN11-214ENST00000475591 GAL3ST2Q9H3Q3 398 aa11.48□□□□□ -0.57
UBXN11-214ENST00000475591 TEX50A0A1B0GTY4 177 aa11.48□□□□□ -0.57
UBXN11-214ENST00000475591 PLAUP00749 431 aa11.48□□□□□ -0.57
UBXN11-214ENST00000475591 MLANAQ16655 118 aa11.48□□□□□ -0.57
UBXN11-214ENST00000475591 ZNF833PQ6ZTB9 187 aa11.48□□□□□ -0.57
UBXN11-214ENST00000475591 STPG3Q8N7X2 389 aa11.48□□□□□ -0.57
UBXN11-214ENST00000475591 FRZBQ92765 325 aa11.48□□□□□ -0.57
UBXN11-214ENST00000475591 SEPSECSQ9HD40 501 aaKnown RBP11.48□□□□□ -0.57
UBXN11-214ENST00000475591 TLN1Q9Y490 2541 aaKnown RBP11.48□□□□□ -0.57
UBXN11-214ENST00000475591 ARFGEF3Q5TH69 2177 aa11.47□□□□□ -0.57
UBXN11-214ENST00000475591 PGPEP1LA6NFU8 196 aa11.47□□□□□ -0.57
UBXN11-214ENST00000475591 CHRNB4P30926 498 aa11.47□□□□□ -0.57
UBXN11-214ENST00000475591 DLX1P56177 255 aa11.47□□□□□ -0.57
UBXN11-214ENST00000475591 PRB3Q04118 309 aaPredicted RBP11.47□□□□□ -0.57
UBXN11-214ENST00000475591 GFI1BQ5VTD9 330 aa11.47□□□□□ -0.57
UBXN11-214ENST00000475591 PLEKHA3Q9HB20 300 aa11.47□□□□□ -0.57
UBXN11-214ENST00000475591 DYNLRB1Q9NP97 96 aa11.47□□□□□ -0.57
UBXN11-214ENST00000475591 TRAV20A0A0B4J274 112 aa11.47□□□□□ -0.57
UBXN11-214ENST00000475591 DVL1O14640 695 aa11.47□□□□□ -0.57
UBXN11-214ENST00000475591 FOXH1O75593 365 aa11.47□□□□□ -0.57
UBXN11-214ENST00000475591 TEPPQ6URK8 271 aa11.47□□□□□ -0.57
UBXN11-214ENST00000475591 RAB1CQ92928 201 aa11.47□□□□□ -0.57
UBXN11-214ENST00000475591 PRNDQ9UKY0 176 aa11.47□□□□□ -0.57
UBXN11-214ENST00000475591 E7EUB6 86 aa11.46□□□□□ -0.57
UBXN11-214ENST00000475591 NDUFB4O95168 129 aa11.46□□□□□ -0.57
UBXN11-214ENST00000475591 S100A8P05109 93 aa11.46□□□□□ -0.57
UBXN11-214ENST00000475591 STAG3L2P0CL84 134 aa11.46□□□□□ -0.57
UBXN11-214ENST00000475591 STAG3L3P0CL85 134 aa11.46□□□□□ -0.57
UBXN11-214ENST00000475591 PRCDQ00LT1 54 aa11.46□□□□□ -0.57
UBXN11-214ENST00000475591 PDZD11Q5EBL8 140 aa11.46□□□□□ -0.57
UBXN11-214ENST00000475591 HARBI1Q96MB7 349 aa11.46□□□□□ -0.57
UBXN11-214ENST00000475591 CTDSP1Q9GZU7 261 aa11.46□□□□□ -0.57
UBXN11-214ENST00000475591 PTPRQQ9UMZ3 2332 aa11.46□□□□□ -0.57
UBXN11-214ENST00000475591 TACC2O95359 2948 aa11.46□□□□□ -0.57
UBXN11-214ENST00000475591 LYNX1G3V0Z9 82 aa11.46□□□□□ -0.58
UBXN11-214ENST00000475591 H0YJW9 148 aa11.46□□□□□ -0.58
UBXN11-214ENST00000475591 TNFRSF13BO14836 293 aaPredicted RBP11.46□□□□□ -0.58
UBXN11-214ENST00000475591 TRGC1P0CF51 173 aa11.46□□□□□ -0.58
UBXN11-214ENST00000475591 LYNX1P0DP58 116 aa11.46□□□□□ -0.58
UBXN11-214ENST00000475591 HOXA5P20719 270 aa11.46□□□□□ -0.58
UBXN11-214ENST00000475591 GATA2P23769 480 aaPredicted RBP11.46□□□□□ -0.58
UBXN11-214ENST00000475591 GRNP28799 593 aaKnown RBP11.46□□□□□ -0.58
UBXN11-214ENST00000475591 MEF2CQ06413 473 aaPredicted RBP11.46□□□□□ -0.58
UBXN11-214ENST00000475591 EFNB3Q15768 340 aa11.46□□□□□ -0.58
UBXN11-214ENST00000475591 ZNF114Q8NC26 417 aa11.46□□□□□ -0.58
UBXN11-214ENST00000475591 LINC01560Q8TB33 94 aa11.46□□□□□ -0.58
UBXN11-214ENST00000475591 IGKV1OR2-108A0A075B7D4 117 aa11.45□□□□□ -0.58
UBXN11-214ENST00000475591 NDUFB3O43676 98 aa11.45□□□□□ -0.58
UBXN11-214ENST00000475591 ACTL6BO94805 426 aa11.45□□□□□ -0.58
UBXN11-214ENST00000475591 PFN1P07737 140 aaKnown RBP11.45□□□□□ -0.58
UBXN11-214ENST00000475591 LOXP28300 417 aaPredicted RBP11.45□□□□□ -0.58
UBXN11-214ENST00000475591 ZNF124Q15973 351 aa11.45□□□□□ -0.58
UBXN11-214ENST00000475591 YTHDF2Q9Y5A9 579 aaKnown RBP11.45□□□□□ -0.58
UBXN11-214ENST00000475591 TRBV24-1A0A075B6N3 115 aa11.45□□□□□ -0.58
UBXN11-214ENST00000475591 H7BYZ3 331 aa11.45□□□□□ -0.58
UBXN11-214ENST00000475591 SMIM6P0DI80 62 aa11.45□□□□□ -0.58
UBXN11-214ENST00000475591 GALR1P47211 349 aa11.45□□□□□ -0.58
UBXN11-214ENST00000475591 OR10X1Q8NGY0 326 aa11.45□□□□□ -0.58
UBXN11-214ENST00000475591 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.44□□□□□ -0.58
UBXN11-214ENST00000475591 PHOX2AO14813 284 aa11.44□□□□□ -0.58
UBXN11-214ENST00000475591 S100A9P06702 114 aaKnown RBP11.44□□□□□ -0.58
UBXN11-214ENST00000475591 CHRNA7P36544 502 aa11.44□□□□□ -0.58
UBXN11-214ENST00000475591 TMEM30BQ3MIR4 351 aa11.44□□□□□ -0.58
UBXN11-214ENST00000475591 LRRC10Q5BKY1 277 aa11.44□□□□□ -0.58
UBXN11-214ENST00000475591 C10orf55Q5SWW7 151 aa11.44□□□□□ -0.58
UBXN11-214ENST00000475591 NIT2Q9NQR4 276 aa11.44□□□□□ -0.58
UBXN11-214ENST00000475591 ZNF257Q9Y2Q1 563 aa11.44□□□□□ -0.58
UBXN11-214ENST00000475591 TRBV20OR9-2A0A075B6H5 130 aa11.44□□□□□ -0.58
UBXN11-214ENST00000475591 SCO2A0A1W2PP80 73 aa11.44□□□□□ -0.58
UBXN11-214ENST00000475591 FAM90A27PA6NNH2 459 aa11.44□□□□□ -0.58
UBXN11-214ENST00000475591 CXorf1O96002 111 aa11.44□□□□□ -0.58
UBXN11-214ENST00000475591 APOA2P02652 100 aa11.44□□□□□ -0.58
UBXN11-214ENST00000475591 HNF1AP20823 631 aa11.44□□□□□ -0.58
UBXN11-214ENST00000475591 BET1LQ9NYM9 111 aa11.44□□□□□ -0.58
UBXN11-214ENST00000475591 POLEQ07864 2286 aa11.43□□□□□ -0.58
UBXN11-214ENST00000475591 SOD3P08294 240 aa11.43□□□□□ -0.58
UBXN11-214ENST00000475591 C1QTNF9P0C862 333 aa11.43□□□□□ -0.58
UBXN11-214ENST00000475591 LINC00869P0C866 280 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms