RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 EFCAB10A6NFE3 127 aa11.53□□□□□ -0.56
HPS4-210ENST00000473782 K7EIM0 57 aa11.53□□□□□ -0.56
HPS4-210ENST00000473782 SLC17A2O00624 439 aa11.53□□□□□ -0.56
HPS4-210ENST00000473782 CLDN12P56749 244 aa11.53□□□□□ -0.56
HPS4-210ENST00000473782 WT1-ASQ06250 92 aa11.53□□□□□ -0.56
HPS4-210ENST00000473782 TIMM50Q3ZCQ8 353 aa11.53□□□□□ -0.56
HPS4-210ENST00000473782 RNF212Q495C1 297 aa11.53□□□□□ -0.56
HPS4-210ENST00000473782 Q6ZS49 121 aa11.53□□□□□ -0.56
HPS4-210ENST00000473782 UBE2DNLQ8IWF7 75 aa11.53□□□□□ -0.56
HPS4-210ENST00000473782 MFSD4AQ8N468 514 aa11.53□□□□□ -0.56
HPS4-210ENST00000473782 OR56B1Q8NGI3 324 aa11.53□□□□□ -0.56
HPS4-210ENST00000473782 GIMAP1Q8WWP7 306 aa11.53□□□□□ -0.56
HPS4-210ENST00000473782 MS4A6AQ9H2W1 248 aa11.53□□□□□ -0.56
HPS4-210ENST00000473782 C21orf62Q9NYP8 219 aa11.53□□□□□ -0.56
HPS4-210ENST00000473782 TBC1D24Q9ULP9 559 aa11.53□□□□□ -0.56
HPS4-210ENST00000473782 MFNGO00587 321 aa11.52□□□□□ -0.57
HPS4-210ENST00000473782 ATP8B1O43520 1251 aa11.52□□□□□ -0.57
HPS4-210ENST00000473782 DFFBO76075 338 aa11.52□□□□□ -0.57
HPS4-210ENST00000473782 APOHP02749 345 aaPredicted RBP11.52□□□□□ -0.57
HPS4-210ENST00000473782 NFYAP23511 347 aaPredicted RBP11.52□□□□□ -0.57
HPS4-210ENST00000473782 ST3GAL4Q11206 333 aa11.52□□□□□ -0.57
HPS4-210ENST00000473782 C2orf76Q3KRA6 126 aa11.52□□□□□ -0.57
HPS4-210ENST00000473782 TMEM41BQ5BJD5 291 aa11.52□□□□□ -0.57
HPS4-210ENST00000473782 LIPKQ5VXJ0 399 aa11.52□□□□□ -0.57
HPS4-210ENST00000473782 TCF24Q7RTU0 167 aa11.52□□□□□ -0.57
HPS4-210ENST00000473782 ZNF367Q7RTV3 350 aa11.52□□□□□ -0.57
HPS4-210ENST00000473782 STHQ8IWL8 128 aa11.52□□□□□ -0.57
HPS4-210ENST00000473782 GDPD1Q8N9F7 314 aa11.52□□□□□ -0.57
HPS4-210ENST00000473782 TCTEX1D2Q8WW35 142 aa11.52□□□□□ -0.57
HPS4-210ENST00000473782 DGCR14Q96DF8 476 aaKnown RBP11.52□□□□□ -0.57
HPS4-210ENST00000473782 SRSF8Q9BRL6 282 aaKnown RBP11.52□□□□□ -0.57
HPS4-210ENST00000473782 SPATA2Q9UM82 520 aa11.52□□□□□ -0.57
HPS4-210ENST00000473782 OR2W1Q9Y3N9 320 aa11.52□□□□□ -0.57
HPS4-210ENST00000473782 UPK2O00526 184 aa11.51□□□□□ -0.57
HPS4-210ENST00000473782 NUPL2O15504 423 aaKnown RBP11.51□□□□□ -0.57
HPS4-210ENST00000473782 SERPINE2P07093 398 aa11.51□□□□□ -0.57
HPS4-210ENST00000473782 UCHL1P09936 223 aa11.51□□□□□ -0.57
HPS4-210ENST00000473782 GNB3P16520 340 aa11.51□□□□□ -0.57
HPS4-210ENST00000473782 WNT4P56705 351 aa11.51□□□□□ -0.57
HPS4-210ENST00000473782 LAIR2Q6ISS4 152 aa11.51□□□□□ -0.57
HPS4-210ENST00000473782 SLC25A24Q6NUK1 477 aa11.51□□□□□ -0.57
HPS4-210ENST00000473782 CENPSQ8N2Z9 138 aa11.51□□□□□ -0.57
HPS4-210ENST00000473782 HSD17B10Q99714 261 aaKnown RBP11.51□□□□□ -0.57
HPS4-210ENST00000473782 VSIRQ9H7M9 311 aa11.51□□□□□ -0.57
HPS4-210ENST00000473782 ELF5Q9UKW6 265 aaPredicted RBP11.51□□□□□ -0.57
HPS4-210ENST00000473782 TMEM272A0A1B0GTI8 110 aa11.5□□□□□ -0.57
HPS4-210ENST00000473782 HRASP01112 189 aa11.5□□□□□ -0.57
HPS4-210ENST00000473782 INAFM2P0DMQ5 153 aa11.5□□□□□ -0.57
HPS4-210ENST00000473782 SPP1P10451 314 aa11.5□□□□□ -0.57
HPS4-210ENST00000473782 CD36P16671 472 aa11.5□□□□□ -0.57
HPS4-210ENST00000473782 HSD17B12Q53GQ0 312 aa11.5□□□□□ -0.57
HPS4-210ENST00000473782 ZNF773Q6PK81 442 aa11.5□□□□□ -0.57
HPS4-210ENST00000473782 NANOGP1Q8N7R0 232 aa11.5□□□□□ -0.57
HPS4-210ENST00000473782 ST8SIA2Q92186 375 aa11.5□□□□□ -0.57
HPS4-210ENST00000473782 FAM3DQ96BQ1 224 aa11.5□□□□□ -0.57
HPS4-210ENST00000473782 RAB3CQ96E17 227 aa11.5□□□□□ -0.57
HPS4-210ENST00000473782 AK6Q9Y3D8 172 aaKnown RBP11.5□□□□□ -0.57
HPS4-210ENST00000473782 FLG2Q5D862 2391 aaPredicted RBP11.5□□□□□ -0.57
HPS4-210ENST00000473782 TRAV14DV4A0A0A6YYC5 116 aa11.49□□□□□ -0.57
HPS4-210ENST00000473782 KNCNA6PVL3 124 aa11.49□□□□□ -0.57
HPS4-210ENST00000473782 EPM2AB3EWF7 344 aa11.49□□□□□ -0.57
HPS4-210ENST00000473782 DENRO43583 198 aaKnown RBP11.49□□□□□ -0.57
HPS4-210ENST00000473782 OR13C7P0DN81 318 aa11.49□□□□□ -0.57
HPS4-210ENST00000473782 SSX1Q16384 188 aa11.49□□□□□ -0.57
HPS4-210ENST00000473782 SPATA12Q7Z6I5 190 aa11.49□□□□□ -0.57
HPS4-210ENST00000473782 MS4A15Q8N5U1 240 aa11.49□□□□□ -0.57
HPS4-210ENST00000473782 UBAC2Q8NBM4 344 aa11.49□□□□□ -0.57
HPS4-210ENST00000473782 PLGRKTQ9HBL7 147 aa11.49□□□□□ -0.57
HPS4-210ENST00000473782 TMEM14BQ9NUH8 114 aa11.49□□□□□ -0.57
HPS4-210ENST00000473782 SMPD3Q9NY59 655 aaPredicted RBP11.49□□□□□ -0.57
HPS4-210ENST00000473782 TAS2R8Q9NYW2 309 aa11.49□□□□□ -0.57
HPS4-210ENST00000473782 HMCN2Q8NDA2 5059 aa11.49□□□□□ -0.57
HPS4-210ENST00000473782 TRAV2A0A0B4J234 112 aa11.48□□□□□ -0.57
HPS4-210ENST00000473782 KRTAP10-2P60368 255 aa11.48□□□□□ -0.57
HPS4-210ENST00000473782 PAFAH1B2P68402 229 aa11.48□□□□□ -0.57
HPS4-210ENST00000473782 MRPS15P82914 257 aaKnown RBP11.48□□□□□ -0.57
HPS4-210ENST00000473782 RAB11BQ15907 218 aa11.48□□□□□ -0.57
HPS4-210ENST00000473782 POU2AF1Q16633 256 aa11.48□□□□□ -0.57
HPS4-210ENST00000473782 TMEM91Q6ZNR0 172 aa11.48□□□□□ -0.57
HPS4-210ENST00000473782 FAM210BQ96KR6 192 aa11.48□□□□□ -0.57
HPS4-210ENST00000473782 CMTM3Q96MX0 182 aa11.48□□□□□ -0.57
HPS4-210ENST00000473782 C9orf16Q9BUW7 83 aa11.48□□□□□ -0.57
HPS4-210ENST00000473782 QTRT1Q9BXR0 403 aaKnown RBP11.48□□□□□ -0.57
HPS4-210ENST00000473782 HRASLSQ9HDD0 168 aa11.48□□□□□ -0.57
HPS4-210ENST00000473782 F11RQ9Y624 299 aaKnown RBP11.48□□□□□ -0.57
HPS4-210ENST00000473782 TEX50A0A1B0GTY4 177 aa11.47□□□□□ -0.57
HPS4-210ENST00000473782 SLC22A5O76082 557 aa11.47□□□□□ -0.57
HPS4-210ENST00000473782 NPY1RP25929 384 aa11.47□□□□□ -0.57
HPS4-210ENST00000473782 Q56UQ5 140 aa11.47□□□□□ -0.57
HPS4-210ENST00000473782 ZNF66Q6ZN08 573 aa11.47□□□□□ -0.57
HPS4-210ENST00000473782 OR10R2Q8NGX6 335 aa11.47□□□□□ -0.57
HPS4-210ENST00000473782 IGHV3-66A0A0C4DH42 116 aa11.46□□□□□ -0.57
HPS4-210ENST00000473782 K7EQG2 157 aa11.46□□□□□ -0.57
HPS4-210ENST00000473782 DNASE2O00115 360 aaPredicted RBP11.46□□□□□ -0.57
HPS4-210ENST00000473782 YIF1AO95070 293 aa11.46□□□□□ -0.57
HPS4-210ENST00000473782 HIST1H1DP16402 221 aaKnown RBP11.46□□□□□ -0.57
HPS4-210ENST00000473782 RELQ04864 619 aaPredicted RBP11.46□□□□□ -0.57
HPS4-210ENST00000473782 UBE2UQ5VVX9 321 aa11.46□□□□□ -0.57
HPS4-210ENST00000473782 C6orf223Q8N319 242 aa11.46□□□□□ -0.57
HPS4-210ENST00000473782 COMMD5Q9GZQ3 224 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms