RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 FAM24BQ8N5W8 94 aa8.54□□□□□ -1.04
LSM2-209ENST00000470083 GDPD1Q8N9F7 314 aa8.54□□□□□ -1.04
LSM2-209ENST00000470083 ZNF414Q96IQ9 312 aa8.54□□□□□ -1.04
LSM2-209ENST00000470083 C18orf15Q96N68 181 aa8.54□□□□□ -1.04
LSM2-209ENST00000470083 MS4A6AQ9H2W1 248 aa8.54□□□□□ -1.04
LSM2-209ENST00000470083 CLEC5AQ9NY25 188 aa8.54□□□□□ -1.04
LSM2-209ENST00000470083 RBMX2Q9Y388 322 aaKnown RBP8.54□□□□□ -1.04
LSM2-209ENST00000470083 NBDYA0A0U1RRE5 68 aa8.53□□□□□ -1.04
LSM2-209ENST00000470083 IRGMA1A4Y4 181 aa8.53□□□□□ -1.04
LSM2-209ENST00000470083 DNASE2O00115 360 aaPredicted RBP8.53□□□□□ -1.04
LSM2-209ENST00000470083 NUPL2O15504 423 aaKnown RBP8.53□□□□□ -1.04
LSM2-209ENST00000470083 HRASP01112 189 aa8.53□□□□□ -1.04
LSM2-209ENST00000470083 CD1AP06126 327 aa8.53□□□□□ -1.04
LSM2-209ENST00000470083 CD37P11049 281 aa8.53□□□□□ -1.04
LSM2-209ENST00000470083 RELQ04864 619 aaPredicted RBP8.53□□□□□ -1.04
LSM2-209ENST00000470083 PHYHIPQ92561 330 aa8.53□□□□□ -1.04
LSM2-209ENST00000470083 SLC7A6OSQ96CW6 309 aaPredicted RBP8.53□□□□□ -1.04
LSM2-209ENST00000470083 DGCR14Q96DF8 476 aaKnown RBP8.53□□□□□ -1.04
LSM2-209ENST00000470083 BET1LQ9NYM9 111 aa8.53□□□□□ -1.04
LSM2-209ENST00000470083 IGHV3OR16-13A0A075B7E8 117 aa8.52□□□□□ -1.05
LSM2-209ENST00000470083 TRAV14DV4A0A0A6YYC5 116 aa8.52□□□□□ -1.05
LSM2-209ENST00000470083 IGHV3-74A0A0B4J1X5 117 aa8.52□□□□□ -1.05
LSM2-209ENST00000470083 WBP4O75554 376 aaKnown RBP8.52□□□□□ -1.05
LSM2-209ENST00000470083 YIF1AO95070 293 aa8.52□□□□□ -1.05
LSM2-209ENST00000470083 CTSGP08311 255 aa8.52□□□□□ -1.05
LSM2-209ENST00000470083 SPART-AS1P0CW21 52 aa8.52□□□□□ -1.05
LSM2-209ENST00000470083 BRWD1-AS2P59051 145 aa8.52□□□□□ -1.05
LSM2-209ENST00000470083 KRTAP10-2P60368 255 aa8.52□□□□□ -1.05
LSM2-209ENST00000470083 TIMM50Q3ZCQ8 353 aa8.52□□□□□ -1.05
LSM2-209ENST00000470083 RBM48Q5RL73 367 aaKnown RBP8.52□□□□□ -1.05
LSM2-209ENST00000470083 UBAC2Q8NBM4 344 aa8.52□□□□□ -1.05
LSM2-209ENST00000470083 SCARB1Q8WTV0 552 aa8.52□□□□□ -1.05
LSM2-209ENST00000470083 TCTEX1D2Q8WW35 142 aa8.52□□□□□ -1.05
LSM2-209ENST00000470083 MAFIPQ8WZ33 124 aa8.52□□□□□ -1.05
LSM2-209ENST00000470083 HSD17B10Q99714 261 aaKnown RBP8.52□□□□□ -1.05
LSM2-209ENST00000470083 CENPOQ9BU64 300 aa8.52□□□□□ -1.05
LSM2-209ENST00000470083 KCNK7Q9Y2U2 307 aa8.52□□□□□ -1.05
LSM2-209ENST00000470083 TMED3Q9Y3Q3 217 aa8.52□□□□□ -1.05
LSM2-209ENST00000470083 NACAE9PAV3 2078 aa8.52□□□□□ -1.05
LSM2-209ENST00000470083 IGHV3-21A0A0B4J1V1 117 aa8.51□□□□□ -1.05
LSM2-209ENST00000470083 SLC22A5O76082 557 aa8.51□□□□□ -1.05
LSM2-209ENST00000470083 IGLV2-14P01704 120 aa8.51□□□□□ -1.05
LSM2-209ENST00000470083 INSL4Q14641 139 aa8.51□□□□□ -1.05
LSM2-209ENST00000470083 P2RY14Q15391 338 aa8.51□□□□□ -1.05
LSM2-209ENST00000470083 Q56UQ5 140 aa8.51□□□□□ -1.05
LSM2-209ENST00000470083 Q5VSD8 79 aa8.51□□□□□ -1.05
LSM2-209ENST00000470083 SLC25A24Q6NUK1 477 aa8.51□□□□□ -1.05
LSM2-209ENST00000470083 CCDC197Q8NCU1 140 aa8.51□□□□□ -1.05
LSM2-209ENST00000470083 DUSP18Q8NEJ0 188 aa8.51□□□□□ -1.05
LSM2-209ENST00000470083 OR56B1Q8NGI3 324 aa8.51□□□□□ -1.05
LSM2-209ENST00000470083 QTRT1Q9BXR0 403 aaKnown RBP8.51□□□□□ -1.05
LSM2-209ENST00000470083 YTHDF1Q9BYJ9 559 aaKnown RBP8.51□□□□□ -1.05
LSM2-209ENST00000470083 COMMD5Q9GZQ3 224 aa8.51□□□□□ -1.05
LSM2-209ENST00000470083 HRASLSQ9HDD0 168 aa8.51□□□□□ -1.05
LSM2-209ENST00000470083 LOC100130705A0A1B0GUX0 176 aa8.5□□□□□ -1.05
LSM2-209ENST00000470083 KNCNA6PVL3 124 aa8.5□□□□□ -1.05
LSM2-209ENST00000470083 J3QRK9 145 aa8.5□□□□□ -1.05
LSM2-209ENST00000470083 K7EIM0 57 aa8.5□□□□□ -1.05
LSM2-209ENST00000470083 ST8SIA3O43173 380 aa8.5□□□□□ -1.05
LSM2-209ENST00000470083 EIF4EP06730 217 aaKnown RBP8.5□□□□□ -1.05
LSM2-209ENST00000470083 SERPINE2P07093 398 aa8.5□□□□□ -1.05
LSM2-209ENST00000470083 EIF4EBP1Q13541 118 aaPredicted RBP8.5□□□□□ -1.05
LSM2-209ENST00000470083 UBE2UQ5VVX9 321 aa8.5□□□□□ -1.05
LSM2-209ENST00000470083 THOC7Q6I9Y2 204 aaKnown RBP8.5□□□□□ -1.05
LSM2-209ENST00000470083 HSD17B13Q7Z5P4 300 aaPredicted RBP8.5□□□□□ -1.05
LSM2-209ENST00000470083 CBR4Q8N4T8 237 aa8.5□□□□□ -1.05
LSM2-209ENST00000470083 OR10W1Q8NGF6 305 aa8.5□□□□□ -1.05
LSM2-209ENST00000470083 ST8SIA2Q92186 375 aa8.5□□□□□ -1.05
LSM2-209ENST00000470083 AIFM2Q9BRQ8 373 aa8.5□□□□□ -1.05
LSM2-209ENST00000470083 VSIRQ9H7M9 311 aa8.5□□□□□ -1.05
LSM2-209ENST00000470083 SPATA2Q9UM82 520 aa8.5□□□□□ -1.05
LSM2-209ENST00000470083 TMEM189A5PLL7 270 aa8.49□□□□□ -1.05
LSM2-209ENST00000470083 HLA-DQB1P01920 261 aa8.49□□□□□ -1.05
LSM2-209ENST00000470083 FGF2P09038 288 aa8.49□□□□□ -1.05
LSM2-209ENST00000470083 OR13C7P0DN81 318 aa8.49□□□□□ -1.05
LSM2-209ENST00000470083 RPL11P62913 178 aaKnown RBP8.49□□□□□ -1.05
LSM2-209ENST00000470083 WT1-ASQ06250 92 aa8.49□□□□□ -1.05
LSM2-209ENST00000470083 ACSM3Q53FZ2 586 aa8.49□□□□□ -1.05
LSM2-209ENST00000470083 C1orf146Q5VVC0 180 aa8.49□□□□□ -1.05
LSM2-209ENST00000470083 ZNF773Q6PK81 442 aa8.49□□□□□ -1.05
LSM2-209ENST00000470083 Q6ZS49 121 aa8.49□□□□□ -1.05
LSM2-209ENST00000470083 LYPD1Q8N2G4 141 aa8.49□□□□□ -1.05
LSM2-209ENST00000470083 LILRB2Q8N423 598 aa8.49□□□□□ -1.05
LSM2-209ENST00000470083 ZNRF2Q8NHG8 242 aa8.49□□□□□ -1.05
LSM2-209ENST00000470083 FRZBQ92765 325 aa8.49□□□□□ -1.05
LSM2-209ENST00000470083 TMEM80Q96HE8 168 aa8.49□□□□□ -1.05
LSM2-209ENST00000470083 GRAMD2BQ96HH9 432 aa8.49□□□□□ -1.05
LSM2-209ENST00000470083 RABAC1Q9UI14 185 aa8.49□□□□□ -1.05
LSM2-209ENST00000470083 OR2W1Q9Y3N9 320 aa8.49□□□□□ -1.05
LSM2-209ENST00000470083 F11RQ9Y624 299 aaKnown RBP8.49□□□□□ -1.05
LSM2-209ENST00000470083 TRAV3A0A0B4J244 114 aa8.48□□□□□ -1.05
LSM2-209ENST00000470083 TEX48A0A1B0GUV7 120 aa8.48□□□□□ -1.05
LSM2-209ENST00000470083 SLC17A2O00624 439 aa8.48□□□□□ -1.05
LSM2-209ENST00000470083 ACTL10Q5JWF8 245 aa8.48□□□□□ -1.05
LSM2-209ENST00000470083 TMEM88Q6PEY1 159 aa8.48□□□□□ -1.05
LSM2-209ENST00000470083 MFSD4AQ8N468 514 aa8.48□□□□□ -1.05
LSM2-209ENST00000470083 RAB3CQ96E17 227 aa8.48□□□□□ -1.05
LSM2-209ENST00000470083 NEU1Q99519 415 aa8.48□□□□□ -1.05
LSM2-209ENST00000470083 GINS3Q9BRX5 216 aa8.48□□□□□ -1.05
LSM2-209ENST00000470083 ATG101Q9BSB4 218 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms