RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 OR52E5Q8NH55 327 aa4.86□□□□□ -1.63
CHMP3-206ENST00000466032 STOML3Q8TAV4 291 aa4.86□□□□□ -1.63
CHMP3-206ENST00000466032 THAP6Q8TBB0 222 aa4.86□□□□□ -1.63
CHMP3-206ENST00000466032 LEAP2Q969E1 77 aa4.86□□□□□ -1.63
CHMP3-206ENST00000466032 SEC22AQ96IW7 307 aa4.86□□□□□ -1.63
CHMP3-206ENST00000466032 CYYR1Q96J86 154 aa4.86□□□□□ -1.63
CHMP3-206ENST00000466032 RHOVQ96L33 236 aa4.86□□□□□ -1.63
CHMP3-206ENST00000466032 CIB3Q96Q77 187 aaPredicted RBP4.86□□□□□ -1.63
CHMP3-206ENST00000466032 CLCC1Q96S66 551 aa4.86□□□□□ -1.63
CHMP3-206ENST00000466032 MS4A7Q9GZW8 240 aaPredicted RBP4.86□□□□□ -1.63
CHMP3-206ENST00000466032 PARP12Q9H0J9 701 aaKnown RBP4.86□□□□□ -1.63
CHMP3-206ENST00000466032 SMDT1Q9H4I9 107 aa4.86□□□□□ -1.63
CHMP3-206ENST00000466032 GSX1Q9H4S2 264 aaPredicted RBP4.86□□□□□ -1.63
CHMP3-206ENST00000466032 KIAA1456Q9P272 454 aa4.86□□□□□ -1.63
CHMP3-206ENST00000466032 PRNDQ9UKY0 176 aa4.86□□□□□ -1.63
CHMP3-206ENST00000466032 ZNF257Q9Y2Q1 563 aa4.86□□□□□ -1.63
CHMP3-206ENST00000466032 UNC79Q9P2D8 2635 aa4.86□□□□□ -1.63
CHMP3-206ENST00000466032 CREBBPQ92793 2442 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 APCP25054 2843 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 C13orf42A0A1B0GVH6 325 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 A0A1W2PPE3 182 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 BTBD17A6NE02 478 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 COLCA2A8K830 154 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 GOSR2O14653 212 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 TCAPO15273 167 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 ST8SIA3O43173 380 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 GPR137BO60478 399 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 CIDEAO60543 219 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 MOSP00540 346 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 SNRNP70P08621 437 aaKnown RBP4.85□□□□□ -1.63
CHMP3-206ENST00000466032 HOXB5P09067 269 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 METTL15P1P0C7V9 234 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 CXCL3P19876 107 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 PSMB6P28072 239 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 SAA4P35542 130 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 NKX2-1P43699 371 aaPredicted RBP4.85□□□□□ -1.63
CHMP3-206ENST00000466032 CDX1P47902 265 aaPredicted RBP4.85□□□□□ -1.63
CHMP3-206ENST00000466032 UBE2KP61086 200 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 NUTF2P61970 127 aaKnown RBP4.85□□□□□ -1.63
CHMP3-206ENST00000466032 RPL30P62888 115 aaKnown RBP4.85□□□□□ -1.63
CHMP3-206ENST00000466032 SP6Q3SY56 376 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 PDLIM3Q53GG5 364 aaPredicted RBP4.85□□□□□ -1.63
CHMP3-206ENST00000466032 NMSQ5H8A3 153 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 ATRAIDQ6UW56 229 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 TMUB2Q71RG4 321 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 LYZL2Q7Z4W2 148 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 C5orf24Q7Z6I8 188 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 MMD2Q8IY49 270 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 FAM71E2Q8N5Q1 922 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 COMMD1Q8N668 190 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 WFDC11Q8NEX6 87 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 OR5B3Q8NH48 314 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 OR4A16Q8NH70 328 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 SAT2Q96F10 170 aaPredicted RBP4.85□□□□□ -1.63
CHMP3-206ENST00000466032 AJUBAQ96IF1 538 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 C20orf173Q96LM9 149 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 HARBI1Q96MB7 349 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 RAB40CQ96S21 281 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 SRSF8Q9BRL6 282 aaKnown RBP4.85□□□□□ -1.63
CHMP3-206ENST00000466032 GGACTQ9BVM4 153 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 MRPL20Q9BYC9 149 aaKnown RBP4.85□□□□□ -1.63
CHMP3-206ENST00000466032 ABCA12Q86UK0 2595 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 CELSR2Q9HCU4 2923 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 CRYBG3Q68DQ2 2970 aa4.85□□□□□ -1.63
CHMP3-206ENST00000466032 CENPEQ02224 2701 aa4.84□□□□□ -1.63
CHMP3-206ENST00000466032 NOTCH2Q04721 2471 aa4.84□□□□□ -1.63
CHMP3-206ENST00000466032 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.84□□□□□ -1.63
CHMP3-206ENST00000466032 PRRC2AP48634 2157 aaKnown RBP4.84□□□□□ -1.63
CHMP3-206ENST00000466032 TRAV40A0A0B4J280 105 aa4.84□□□□□ -1.63
CHMP3-206ENST00000466032 A0A1W2PPI3 338 aa4.84□□□□□ -1.63
CHMP3-206ENST00000466032 SEC14L6B5MCN3 397 aa4.84□□□□□ -1.63
CHMP3-206ENST00000466032 E5RGE8 158 aa4.84□□□□□ -1.63
CHMP3-206ENST00000466032 CYB5BO43169 146 aa4.84□□□□□ -1.63
CHMP3-206ENST00000466032 PITX3O75364 302 aa4.84□□□□□ -1.63
CHMP3-206ENST00000466032 RBMXL2O75526 392 aaKnown RBP4.84□□□□□ -1.63
CHMP3-206ENST00000466032 ACTL6BO94805 426 aa4.84□□□□□ -1.63
CHMP3-206ENST00000466032 KBTBD11O94819 623 aa4.84□□□□□ -1.63
CHMP3-206ENST00000466032 S1PR2O95136 353 aa4.84□□□□□ -1.63
CHMP3-206ENST00000466032 KRASP01116 189 aa4.84□□□□□ -1.63
CHMP3-206ENST00000466032 IGHV3-7P01780 117 aa4.84□□□□□ -1.63
CHMP3-206ENST00000466032 MBP02144 154 aa4.84□□□□□ -1.63
CHMP3-206ENST00000466032 SLC25A4P12235 298 aa4.84□□□□□ -1.63
CHMP3-206ENST00000466032 CXCL2P19875 107 aa4.84□□□□□ -1.63
CHMP3-206ENST00000466032 HOXA5P20719 270 aa4.84□□□□□ -1.63
CHMP3-206ENST00000466032 DDTP30046 118 aa4.84□□□□□ -1.63
CHMP3-206ENST00000466032 H2BFSP57053 126 aa4.84□□□□□ -1.63
CHMP3-206ENST00000466032 DEFA5Q01523 94 aa4.84□□□□□ -1.63
CHMP3-206ENST00000466032 ID3Q02535 119 aa4.84□□□□□ -1.63
CHMP3-206ENST00000466032 IL15RAQ13261 267 aa4.84□□□□□ -1.63
CHMP3-206ENST00000466032 HIST2H2BCQ6DN03 193 aa4.84□□□□□ -1.63
CHMP3-206ENST00000466032 PRSS54Q6PEW0 395 aa4.84□□□□□ -1.63
CHMP3-206ENST00000466032 KCNRGQ8N5I3 272 aa4.84□□□□□ -1.63
CHMP3-206ENST00000466032 TMEM86BQ8N661 226 aa4.84□□□□□ -1.63
CHMP3-206ENST00000466032 HSD17B11Q8NBQ5 300 aa4.84□□□□□ -1.63
CHMP3-206ENST00000466032 INO80EQ8NBZ0 244 aaPredicted RBP4.84□□□□□ -1.63
CHMP3-206ENST00000466032 NPBQ8NG41 125 aa4.84□□□□□ -1.63
CHMP3-206ENST00000466032 OR1L6Q8NGR2 347 aa4.84□□□□□ -1.63
CHMP3-206ENST00000466032 TMEM167AQ8TBQ9 72 aa4.84□□□□□ -1.63
CHMP3-206ENST00000466032 RNASEH2CQ8TDP1 164 aaKnown RBP4.84□□□□□ -1.63
CHMP3-206ENST00000466032 RXFP4Q8TDU9 374 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms