RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 MOSP00540 346 aa11.44□□□□□ -0.58
USP39-207ENST00000450066 MSMBP08118 114 aa11.44□□□□□ -0.58
USP39-207ENST00000450066 MAS1LP35410 378 aa11.44□□□□□ -0.58
USP39-207ENST00000450066 BLOC1S1P78537 153 aa11.44□□□□□ -0.58
USP39-207ENST00000450066 PJVKQ0ZLH3 352 aa11.44□□□□□ -0.58
USP39-207ENST00000450066 DEFB113Q30KQ7 82 aa11.44□□□□□ -0.58
USP39-207ENST00000450066 PPP1R27Q86WC6 154 aa11.44□□□□□ -0.58
USP39-207ENST00000450066 LRRC75A-AS1Q8N1F1 130 aa11.44□□□□□ -0.58
USP39-207ENST00000450066 DYNAPQ8N1N2 210 aa11.44□□□□□ -0.58
USP39-207ENST00000450066 PARP11Q9NR21 331 aa11.44□□□□□ -0.58
USP39-207ENST00000450066 METTL1Q9UBP6 276 aaKnown RBP11.44□□□□□ -0.58
USP39-207ENST00000450066 NAV2Q8IVL1 2488 aa11.43□□□□□ -0.58
USP39-207ENST00000450066 UBE2L5PA0A1B0GUS4 154 aa11.43□□□□□ -0.58
USP39-207ENST00000450066 A0A1W2PN81 502 aa11.43□□□□□ -0.58
USP39-207ENST00000450066 MFSD2BA6NFX1 497 aa11.43□□□□□ -0.58
USP39-207ENST00000450066 B4DSR2 109 aa11.43□□□□□ -0.58
USP39-207ENST00000450066 PRSS46E5RG02 174 aa11.43□□□□□ -0.58
USP39-207ENST00000450066 TRIM77I1YAP6 450 aa11.43□□□□□ -0.58
USP39-207ENST00000450066 CA2P00918 260 aa11.43□□□□□ -0.58
USP39-207ENST00000450066 IGKV1D-33P01593 117 aa11.43□□□□□ -0.58
USP39-207ENST00000450066 IGKV1-33P01594 117 aa11.43□□□□□ -0.58
USP39-207ENST00000450066 CHRNA7P36544 502 aa11.43□□□□□ -0.58
USP39-207ENST00000450066 BSXQ3C1V8 233 aa11.43□□□□□ -0.58
USP39-207ENST00000450066 TMEM182Q6ZP80 229 aaPredicted RBP11.43□□□□□ -0.58
USP39-207ENST00000450066 C17orf50Q8WW18 174 aa11.43□□□□□ -0.58
USP39-207ENST00000450066 TAF15Q92804 592 aaKnown RBP eCLIP11.43□□□□□ -0.58
USP39-207ENST00000450066 AJUBAQ96IF1 538 aa11.43□□□□□ -0.58
USP39-207ENST00000450066 PSMG3Q9BT73 122 aaPredicted RBP11.43□□□□□ -0.58
USP39-207ENST00000450066 REG4Q9BYZ8 158 aa11.43□□□□□ -0.58
USP39-207ENST00000450066 NBPF19A0A087WUL8 3843 aa11.42□□□□□ -0.58
USP39-207ENST00000450066 CENPVL3A0A0U1RRI6 287 aa11.42□□□□□ -0.58
USP39-207ENST00000450066 CGB1A6NKQ9 187 aa11.42□□□□□ -0.58
USP39-207ENST00000450066 E7EUB6 86 aa11.42□□□□□ -0.58
USP39-207ENST00000450066 IFNA4P05014 189 aa11.42□□□□□ -0.58
USP39-207ENST00000450066 PXDC1Q5TGL8 231 aa11.42□□□□□ -0.58
USP39-207ENST00000450066 OR10W1Q8NGF6 305 aa11.42□□□□□ -0.58
USP39-207ENST00000450066 OR2T10Q8NGZ9 312 aa11.42□□□□□ -0.58
USP39-207ENST00000450066 C1orf159Q96HA4 380 aa11.42□□□□□ -0.58
USP39-207ENST00000450066 RFNGQ9Y644 331 aa11.42□□□□□ -0.58
USP39-207ENST00000450066 A0A096LNT2 108 aa11.42□□□□□ -0.58
USP39-207ENST00000450066 NPFFO15130 113 aa11.42□□□□□ -0.58
USP39-207ENST00000450066 ACTL6BO94805 426 aa11.42□□□□□ -0.58
USP39-207ENST00000450066 MDKP21741 143 aaPredicted RBP11.42□□□□□ -0.58
USP39-207ENST00000450066 PAX6P26367 422 aa11.42□□□□□ -0.58
USP39-207ENST00000450066 SAA4P35542 130 aa11.42□□□□□ -0.58
USP39-207ENST00000450066 SNCAP37840 140 aa11.42□□□□□ -0.58
USP39-207ENST00000450066 ERHP84090 104 aaKnown RBP11.42□□□□□ -0.58
USP39-207ENST00000450066 C2orf83Q53S99 150 aa11.42□□□□□ -0.58
USP39-207ENST00000450066 HSD17B13Q7Z5P4 300 aaPredicted RBP11.42□□□□□ -0.58
USP39-207ENST00000450066 EIF4E3Q8N5X7 224 aaKnown RBP11.42□□□□□ -0.58
USP39-207ENST00000450066 NPBQ8NG41 125 aa11.42□□□□□ -0.58
USP39-207ENST00000450066 EAF1Q96JC9 268 aaPredicted RBP11.42□□□□□ -0.58
USP39-207ENST00000450066 TEX46H3BTG2 121 aa11.41□□□□□ -0.58
USP39-207ENST00000450066 NBR2O15453 112 aa11.41□□□□□ -0.58
USP39-207ENST00000450066 PRH1P02810 166 aa11.41□□□□□ -0.58
USP39-207ENST00000450066 SNRNP70P08621 437 aaKnown RBP11.41□□□□□ -0.58
USP39-207ENST00000450066 COMPP49747 757 aaPredicted RBP11.41□□□□□ -0.58
USP39-207ENST00000450066 DLK1P80370 383 aa11.41□□□□□ -0.58
USP39-207ENST00000450066 EBI3Q14213 229 aa11.41□□□□□ -0.58
USP39-207ENST00000450066 MMDQ15546 238 aa11.41□□□□□ -0.58
USP39-207ENST00000450066 C10orf55Q5SWW7 151 aa11.41□□□□□ -0.58
USP39-207ENST00000450066 Q6ZRG5 221 aa11.41□□□□□ -0.58
USP39-207ENST00000450066 RSG1Q9BU20 258 aa11.41□□□□□ -0.58
USP39-207ENST00000450066 FBXL15Q9H469 300 aa11.41□□□□□ -0.58
USP39-207ENST00000450066 TIMM9Q9Y5J7 89 aa11.41□□□□□ -0.58
USP39-207ENST00000450066 DOPEY2Q9Y3R5 2298 aa11.41□□□□□ -0.58
USP39-207ENST00000450066 A0A1B0GW64 132 aa11.4□□□□□ -0.58
USP39-207ENST00000450066 NUDT19A8MXV4 375 aa11.4□□□□□ -0.58
USP39-207ENST00000450066 NDUFA3O95167 84 aa11.4□□□□□ -0.58
USP39-207ENST00000450066 RNASE2P10153 161 aaKnown RBP11.4□□□□□ -0.58
USP39-207ENST00000450066 CD24P25063 80 aa11.4□□□□□ -0.58
USP39-207ENST00000450066 CAMLGP49069 296 aa11.4□□□□□ -0.58
USP39-207ENST00000450066 SERF2P84101 59 aa11.4□□□□□ -0.58
USP39-207ENST00000450066 WT1-ASQ06250 92 aa11.4□□□□□ -0.58
USP39-207ENST00000450066 HES1Q14469 280 aa11.4□□□□□ -0.58
USP39-207ENST00000450066 HNF4GQ14541 408 aa11.4□□□□□ -0.58
USP39-207ENST00000450066 AANATQ16613 207 aa11.4□□□□□ -0.58
USP39-207ENST00000450066 CENPVQ7Z7K6 275 aaPredicted RBP11.4□□□□□ -0.58
USP39-207ENST00000450066 PIP4P2Q8N4L2 257 aa11.4□□□□□ -0.58
USP39-207ENST00000450066 LYPD6BQ8NI32 183 aa11.4□□□□□ -0.58
USP39-207ENST00000450066 MBD6Q96DN6 1003 aa11.4□□□□□ -0.58
USP39-207ENST00000450066 TRAV20A0A0B4J274 112 aa11.4□□□□□ -0.58
USP39-207ENST00000450066 ANKRD34BA5PLL1 514 aa11.4□□□□□ -0.58
USP39-207ENST00000450066 GATA3P23771 443 aa11.4□□□□□ -0.58
USP39-207ENST00000450066 RPL27AP46776 148 aaKnown RBP11.4□□□□□ -0.58
USP39-207ENST00000450066 FHITP49789 147 aa11.4□□□□□ -0.58
USP39-207ENST00000450066 PLGLAQ15195 96 aa11.4□□□□□ -0.58
USP39-207ENST00000450066 TNXAQ16473 311 aa11.4□□□□□ -0.58
USP39-207ENST00000450066 TUSC1Q2TAM9 212 aa11.4□□□□□ -0.58
USP39-207ENST00000450066 AKR1C8PQ5T2L2 129 aa11.4□□□□□ -0.58
USP39-207ENST00000450066 BTNL8Q6UX41 500 aa11.4□□□□□ -0.58
USP39-207ENST00000450066 DPPA3Q6W0C5 159 aa11.4□□□□□ -0.58
USP39-207ENST00000450066 MRPL41Q8IXM3 137 aaKnown RBP11.4□□□□□ -0.58
USP39-207ENST00000450066 Q8N6K4 173 aa11.4□□□□□ -0.58
USP39-207ENST00000450066 MARC2Q969Z3 335 aa11.4□□□□□ -0.58
USP39-207ENST00000450066 HRH4Q9H3N8 390 aa11.4□□□□□ -0.58
USP39-207ENST00000450066 KIAA1456Q9P272 454 aa11.4□□□□□ -0.58
USP39-207ENST00000450066 WDR83OSQ9Y284 106 aa11.4□□□□□ -0.58
USP39-207ENST00000450066 FBXO7Q9Y3I1 522 aa11.4□□□□□ -0.58
USP39-207ENST00000450066 GCN1Q92616 2671 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms