RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 P2RX4Q99571 388 aa20.82■□□□□ 0.92
CPNE1-216ENST00000437340 CLEC7AQ9BXN2 247 aa20.82■□□□□ 0.92
CPNE1-216ENST00000437340 HRNRQ86YZ3 2850 aaPredicted RBP20.82■□□□□ 0.92
CPNE1-216ENST00000437340 LIPFP07098 398 aa20.82■□□□□ 0.92
CPNE1-216ENST00000437340 LGALS7P47929 136 aa20.82■□□□□ 0.92
CPNE1-216ENST00000437340 BSXQ3C1V8 233 aa20.82■□□□□ 0.92
CPNE1-216ENST00000437340 AWAT1Q58HT5 328 aa20.82■□□□□ 0.92
CPNE1-216ENST00000437340 C17orf50Q8WW18 174 aa20.82■□□□□ 0.92
CPNE1-216ENST00000437340 COMMD5Q9GZQ3 224 aa20.82■□□□□ 0.92
CPNE1-216ENST00000437340 KCNIP2Q9NS61 270 aa20.82■□□□□ 0.92
CPNE1-216ENST00000437340 LSM4Q9Y4Z0 139 aaKnown RBP20.82■□□□□ 0.92
CPNE1-216ENST00000437340 DOPEY1Q5JWR5 2465 aa20.81■□□□□ 0.92
CPNE1-216ENST00000437340 CHD6Q8TD26 2715 aa20.81■□□□□ 0.92
CPNE1-216ENST00000437340 LY6HO94772 140 aa20.81■□□□□ 0.92
CPNE1-216ENST00000437340 IGLV2-23P01705 113 aa20.81■□□□□ 0.92
CPNE1-216ENST00000437340 RHEBQ15382 184 aa20.81■□□□□ 0.92
CPNE1-216ENST00000437340 C2orf83Q53S99 150 aa20.81■□□□□ 0.92
CPNE1-216ENST00000437340 RBMS3Q6XE24 437 aaKnown RBP20.81■□□□□ 0.92
CPNE1-216ENST00000437340 OR1L8Q8NGR8 309 aa20.81■□□□□ 0.92
CPNE1-216ENST00000437340 SMCO4Q9NRQ5 59 aa20.81■□□□□ 0.92
CPNE1-216ENST00000437340 NDUFA4L2Q9NRX3 87 aa20.81■□□□□ 0.92
CPNE1-216ENST00000437340 UBR5O95071 2799 aaPredicted RBP20.81■□□□□ 0.92
CPNE1-216ENST00000437340 ZFP92A6NM28 416 aa20.8■□□□□ 0.92
CPNE1-216ENST00000437340 SLC25A22Q9H936 323 aa20.8■□□□□ 0.92
CPNE1-216ENST00000437340 PATZ1Q9HBE1 687 aaKnown RBP20.8■□□□□ 0.92
CPNE1-216ENST00000437340 VAX2Q9UIW0 290 aa20.8■□□□□ 0.92
CPNE1-216ENST00000437340 SEC14L6B5MCN3 397 aa20.8■□□□□ 0.92
CPNE1-216ENST00000437340 M0R036 132 aa20.8■□□□□ 0.92
CPNE1-216ENST00000437340 ATF4P18848 351 aaPredicted RBP20.8■□□□□ 0.92
CPNE1-216ENST00000437340 TAGLN2P37802 199 aaKnown RBP20.8■□□□□ 0.92
CPNE1-216ENST00000437340 VMA21Q3ZAQ7 101 aa20.8■□□□□ 0.92
CPNE1-216ENST00000437340 ARSJQ5FYB0 599 aaPredicted RBP20.8■□□□□ 0.92
CPNE1-216ENST00000437340 CYB561D1Q8N8Q1 229 aa20.8■□□□□ 0.92
CPNE1-216ENST00000437340 AMMECR1Q9Y4X0 333 aaPredicted RBP20.8■□□□□ 0.92
CPNE1-216ENST00000437340 FAM208BQ5VWN6 2430 aa20.79■□□□□ 0.92
CPNE1-216ENST00000437340 A0A1W2PPR1 153 aa20.79■□□□□ 0.92
CPNE1-216ENST00000437340 BUB1B-PAK6H3BSN5 160 aa20.79■□□□□ 0.92
CPNE1-216ENST00000437340 RAB24Q969Q5 203 aa20.79■□□□□ 0.92
CPNE1-216ENST00000437340 MGST2Q99735 147 aa20.79■□□□□ 0.92
CPNE1-216ENST00000437340 GGTLC1Q9BX51 225 aa20.79■□□□□ 0.92
CPNE1-216ENST00000437340 A0A1W2PN81 502 aa20.78■□□□□ 0.92
CPNE1-216ENST00000437340 C7orf77A4D0Y5 90 aa20.78■□□□□ 0.92
CPNE1-216ENST00000437340 CHRNA7P36544 502 aa20.78■□□□□ 0.92
CPNE1-216ENST00000437340 FAM122CQ6P4D5 195 aa20.78■□□□□ 0.92
CPNE1-216ENST00000437340 TEPPQ6URK8 271 aa20.78■□□□□ 0.92
CPNE1-216ENST00000437340 RPS10P5Q9NQ39 176 aa20.78■□□□□ 0.92
CPNE1-216ENST00000437340 LOC105371267A0A1B0GV96 52 aa20.77■□□□□ 0.92
CPNE1-216ENST00000437340 NDUFS6O75380 124 aaKnown RBP20.77■□□□□ 0.92
CPNE1-216ENST00000437340 OPN1MWP04001 364 aa20.77■□□□□ 0.92
CPNE1-216ENST00000437340 SNRNP70P08621 437 aaKnown RBP20.77■□□□□ 0.92
CPNE1-216ENST00000437340 OPN1MW2P0DN77 364 aa20.77■□□□□ 0.92
CPNE1-216ENST00000437340 OPN1MW3P0DN78 364 aa20.77■□□□□ 0.92
CPNE1-216ENST00000437340 PAX6P26367 422 aa20.77■□□□□ 0.92
CPNE1-216ENST00000437340 CDC34P49427 236 aaPredicted RBP20.77■□□□□ 0.92
CPNE1-216ENST00000437340 SRSF1Q07955 248 aaKnown RBP eCLIP20.77■□□□□ 0.923e-6■□□□□ 9.1
CPNE1-216ENST00000437340 RAB31Q13636 194 aa20.77■□□□□ 0.92
CPNE1-216ENST00000437340 TMEM249Q2WGJ8 235 aa20.77■□□□□ 0.92
CPNE1-216ENST00000437340 C22orf46C9J442 243 aa20.77■□□□□ 0.91
CPNE1-216ENST00000437340 ERHP84090 104 aaKnown RBP20.77■□□□□ 0.91
CPNE1-216ENST00000437340 TUBA4BQ9H853 241 aa20.77■□□□□ 0.91
CPNE1-216ENST00000437340 TNCP24821 2201 aa20.76■□□□□ 0.91
CPNE1-216ENST00000437340 FBP1P09467 338 aa20.76■□□□□ 0.91
CPNE1-216ENST00000437340 RNASE2P10153 161 aaKnown RBP20.76■□□□□ 0.91
CPNE1-216ENST00000437340 C1orf159Q96HA4 380 aa20.76■□□□□ 0.91
CPNE1-216ENST00000437340 MANBALQ9NQG1 85 aa20.76■□□□□ 0.91
CPNE1-216ENST00000437340 PUS1Q9Y606 427 aaKnown RBP eCLIP20.76■□□□□ 0.91
CPNE1-216ENST00000437340 TEX45Q8NA69 505 aa20.75■□□□□ 0.91
CPNE1-216ENST00000437340 OR4P4Q8NGL7 312 aa20.75■□□□□ 0.91
CPNE1-216ENST00000437340 ZNF430Q9H8G1 570 aaPredicted RBP20.75■□□□□ 0.91
CPNE1-216ENST00000437340 ONECUT1Q9UBC0 465 aa20.75■□□□□ 0.91
CPNE1-216ENST00000437340 INSIG2Q9Y5U4 225 aa20.75■□□□□ 0.91
CPNE1-216ENST00000437340 PXMP4Q9Y6I8 212 aa20.75■□□□□ 0.91
CPNE1-216ENST00000437340 IGHV1-3A0A0C4DH29 117 aa20.74■□□□□ 0.91
CPNE1-216ENST00000437340 H3BQ15 152 aa20.74■□□□□ 0.91
CPNE1-216ENST00000437340 M0R1W7 72 aa20.74■□□□□ 0.91
CPNE1-216ENST00000437340 YIF1AO95070 293 aa20.74■□□□□ 0.91
CPNE1-216ENST00000437340 AKIRIN2Q53H80 203 aa20.74■□□□□ 0.91
CPNE1-216ENST00000437340 NIPSNAP3BQ9BS92 247 aa20.74■□□□□ 0.91
CPNE1-216ENST00000437340 SSBP3Q9BWW4 388 aaPredicted RBP20.74■□□□□ 0.91
CPNE1-216ENST00000437340 A6NNC1 897 aa20.74■□□□□ 0.91
CPNE1-216ENST00000437340 RPL29P47914 159 aaKnown RBP20.74■□□□□ 0.91
CPNE1-216ENST00000437340 LRBAP50851 2863 aa20.73■□□□□ 0.91
CPNE1-216ENST00000437340 PSMB3P49720 205 aa20.73■□□□□ 0.91
CPNE1-216ENST00000437340 CEBPGP53567 150 aa20.73■□□□□ 0.91
CPNE1-216ENST00000437340 TMEM144Q7Z5S9 345 aa20.73■□□□□ 0.91
CPNE1-216ENST00000437340 SLC35E3Q7Z769 313 aa20.73■□□□□ 0.91
CPNE1-216ENST00000437340 C15orf54Q8N8G6 183 aa20.73■□□□□ 0.91
CPNE1-216ENST00000437340 OR10W1Q8NGF6 305 aa20.73■□□□□ 0.91
CPNE1-216ENST00000437340 C20orf24Q9BUV8 137 aa20.73■□□□□ 0.91
CPNE1-216ENST00000437340 LOC105371242A0A075B767 164 aa20.72■□□□□ 0.91
CPNE1-216ENST00000437340 A0A1W2PPV4 95 aa20.72■□□□□ 0.91
CPNE1-216ENST00000437340 LY6LH3BQJ8 138 aa20.72■□□□□ 0.91
CPNE1-216ENST00000437340 ENSAO43768 121 aaKnown RBP20.72■□□□□ 0.91
CPNE1-216ENST00000437340 SLC25A17O43808 307 aa20.72■□□□□ 0.91
CPNE1-216ENST00000437340 COX7A1P24310 79 aa20.72■□□□□ 0.91
CPNE1-216ENST00000437340 MIC13Q5XKP0 118 aa20.72■□□□□ 0.91
CPNE1-216ENST00000437340 FAM90A2PQ658T7 463 aa20.72■□□□□ 0.91
CPNE1-216ENST00000437340 RPEQ96AT9 228 aa20.72■□□□□ 0.91
CPNE1-216ENST00000437340 HMGB3O15347 200 aaKnown RBP20.72■□□□□ 0.91
CPNE1-216ENST00000437340 GPR6P46095 362 aaPredicted RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms