RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 IRGMA1A4Y4 181 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 LINC00862A6NCI5 91 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 IFITM5A6NNB3 132 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 A8MWL6 223 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 IGLL5B9A064 214 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 J3QQQ9 107 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 IGLV2-23P01705 113 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 HLA-DQB1P01920 261 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 TRGC2P03986 189 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 APODP05090 189 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 SEC11BP0C7V7 166 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 CSRP1P21291 193 aaKnown RBP2.65□□□□□ -1.99
SF3B1-205ENST00000424674 NFYBP25208 207 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 FKBP2P26885 142 aaKnown RBP2.65□□□□□ -1.99
SF3B1-205ENST00000424674 UBE2AP49459 152 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 DAPP51397 102 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 TAS2R45P59539 299 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 MSMO1Q15800 293 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 VMA21Q3ZAQ7 101 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 AMMECR1LQ6DCA0 310 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 RPL22L1Q6P5R6 122 aaKnown RBP2.65□□□□□ -1.99
SF3B1-205ENST00000424674 LCA10Q71F78 164 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 CTAGE3PQ8IX95 158 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 MSRB3Q8IXL7 192 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 LYG1Q8N1E2 194 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 OR4K5Q8NGD3 323 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 OR5A2Q8NGI9 324 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 OR51A4Q8NGJ6 313 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 PPTC7Q8NI37 304 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 C15orf40Q8WUR7 153 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 DERL3Q96Q80 235 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 CA10Q9NS85 328 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 ZNF581Q9P0T4 197 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 BAIAP2Q9UQB8 552 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 MRPS16Q9Y3D3 137 aaKnown RBP2.65□□□□□ -1.99
SF3B1-205ENST00000424674 NAIPQ13075 1403 aa2.65□□□□□ -1.99
SF3B1-205ENST00000424674 TRAV30A0A087WSZ9 112 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 A0A087X002 238 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 TRAV41A0A0B4J266 112 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 IGHV7-4-1A0A0J9YVY3 117 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 TMEM218A2RU14 115 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 GGT3PA6NGU5 568 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 GGTLC3B5MD39 225 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 C9JCJ5 164 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 GABARAPH6UMI1 98 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 LY6G6DO95868 133 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 IGHV3-13P01766 116 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 ZNF688P0C7X2 276 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 LINC00869P0C866 280 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 IGLC6P0CF74 106 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 ELK1P19419 428 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 ATP6V0CP27449 155 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 CXCL5P42830 114 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 GUCA1AP43080 201 aaPredicted RBP2.64□□□□□ -1.99
SF3B1-205ENST00000424674 GNG4P50150 75 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 AKR1C2P52895 323 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 FGF12P61328 243 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 CCL20P78556 96 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 KIAA0040Q15053 153 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 ZNF181Q2M3W8 571 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 TMEM244Q5VVB8 128 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 Q5XG85 94 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 MORN3Q6PF18 240 aaPredicted RBP2.64□□□□□ -1.99
SF3B1-205ENST00000424674 GPHB5Q86YW7 130 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 C10orf126Q8N4M7 172 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 FER1L6-AS1Q8NA97 138 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 HIST1H2BAQ96A08 127 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 NRTNQ99748 197 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 CHAC1Q9BUX1 264 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 C1QTNF6Q9BXI9 259 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 SPANXDQ9BXN6 97 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 FGF23Q9GZV9 251 aaPredicted RBP2.64□□□□□ -1.99
SF3B1-205ENST00000424674 RERGLQ9H628 205 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 SCN3BQ9NY72 215 aa2.64□□□□□ -1.99
SF3B1-205ENST00000424674 TMEM2Q9UHN6 1383 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 TRBV7-6A0A0J9YX20 115 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 TMEM212A6NML5 194 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 TAX1BP3O14907 124 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 NPFFO15130 113 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 PLA2G10O15496 165 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 SOCS1O15524 211 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 RBFOX2O43251 390 aaKnown RBP eCLIP2.63□□□□□ -1.99
SF3B1-205ENST00000424674 CST7O76096 145 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 LINC00694P0DN24 101 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 IGHV1-8P0DP01 117 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 HLA-EP13747 358 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 ZNF823P16415 610 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 LGALS3P17931 250 aaKnown RBP2.63□□□□□ -1.99
SF3B1-205ENST00000424674 HIST1H2BOP23527 126 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 S100A4P26447 101 aaKnown RBP2.63□□□□□ -1.99
SF3B1-205ENST00000424674 S100A2P29034 98 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 HIST1H2BBP33778 126 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 SDC2P34741 201 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 NMUP48645 174 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 RAB5CP51148 216 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 TMBIM6P55061 237 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 HIST1H2BDP58876 126 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 HIST1H2BCP62807 126 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 PDGFRLQ15198 375 aa2.63□□□□□ -1.99
SF3B1-205ENST00000424674 HIST2H2BEQ16778 126 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms