RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 PVRIGQ6DKI7 326 aa12.16□□□□□ -0.46
CHCHD3-202ENST00000423635 PACRGLQ8N7B6 248 aa12.16□□□□□ -0.46
CHCHD3-202ENST00000423635 RHPN1-AS1Q9BWJ2 59 aa12.16□□□□□ -0.46
CHCHD3-202ENST00000423635 HRASLSQ9HDD0 168 aa12.16□□□□□ -0.46
CHCHD3-202ENST00000423635 TAS2R8Q9NYW2 309 aa12.16□□□□□ -0.46
CHCHD3-202ENST00000423635 ELF5Q9UKW6 265 aaPredicted RBP12.16□□□□□ -0.46
CHCHD3-202ENST00000423635 IGHV3OR16-8A0A075B7F1 116 aa12.15□□□□□ -0.46
CHCHD3-202ENST00000423635 TRAV10A0A0B4J240 114 aa12.15□□□□□ -0.46
CHCHD3-202ENST00000423635 TRAV3A0A0B4J244 114 aa12.15□□□□□ -0.46
CHCHD3-202ENST00000423635 UPK2O00526 184 aa12.15□□□□□ -0.46
CHCHD3-202ENST00000423635 ZNF207O43670 478 aaKnown RBP12.15□□□□□ -0.46
CHCHD3-202ENST00000423635 RBMY1A1P0DJD3 496 aaKnown RBP12.15□□□□□ -0.46
CHCHD3-202ENST00000423635 RBMY1CP0DJD4 496 aa12.15□□□□□ -0.46
CHCHD3-202ENST00000423635 PSMA1P25786 263 aaKnown RBP12.15□□□□□ -0.46
CHCHD3-202ENST00000423635 CALRP27797 417 aaKnown RBP12.15□□□□□ -0.46
CHCHD3-202ENST00000423635 HLA-DMBP28068 263 aa12.15□□□□□ -0.46
CHCHD3-202ENST00000423635 ARL6IP1Q15041 203 aa12.15□□□□□ -0.46
CHCHD3-202ENST00000423635 RBMY1FQ15415 496 aaKnown RBP12.15□□□□□ -0.46
CHCHD3-202ENST00000423635 POU2AF1Q16633 256 aa12.15□□□□□ -0.46
CHCHD3-202ENST00000423635 CNIH2Q6PI25 160 aa12.15□□□□□ -0.46
CHCHD3-202ENST00000423635 POM121L12Q8N7R1 296 aa12.15□□□□□ -0.46
CHCHD3-202ENST00000423635 GDPD1Q8N9F7 314 aa12.15□□□□□ -0.46
CHCHD3-202ENST00000423635 ZNF414Q96IQ9 312 aa12.15□□□□□ -0.46
CHCHD3-202ENST00000423635 RNF126Q9BV68 326 aa12.15□□□□□ -0.46
CHCHD3-202ENST00000423635 COMMD5Q9GZQ3 224 aa12.15□□□□□ -0.46
CHCHD3-202ENST00000423635 DCSTAMPQ9H295 470 aa12.15□□□□□ -0.46
CHCHD3-202ENST00000423635 IGHV7-4-1A0A0J9YVY3 117 aa12.14□□□□□ -0.47
CHCHD3-202ENST00000423635 METTL21EPA6NDL7 271 aa12.14□□□□□ -0.47
CHCHD3-202ENST00000423635 RBFOX2O43251 390 aaKnown RBP eCLIP12.14□□□□□ -0.473e-6■■■■□ 22.3
CHCHD3-202ENST00000423635 SERPINE2P07093 398 aa12.14□□□□□ -0.47
CHCHD3-202ENST00000423635 TAS2R31P59538 309 aa12.14□□□□□ -0.47
CHCHD3-202ENST00000423635 RPS25P62851 125 aaKnown RBP12.14□□□□□ -0.47
CHCHD3-202ENST00000423635 THOC7Q6I9Y2 204 aaKnown RBP12.14□□□□□ -0.47
CHCHD3-202ENST00000423635 SLC25A24Q6NUK1 477 aa12.14□□□□□ -0.47
CHCHD3-202ENST00000423635 OR10W1Q8NGF6 305 aa12.14□□□□□ -0.47
CHCHD3-202ENST00000423635 SCARB1Q8WTV0 552 aa12.14□□□□□ -0.47
CHCHD3-202ENST00000423635 GPHA2Q96T91 129 aa12.14□□□□□ -0.47
CHCHD3-202ENST00000423635 C21orf62Q9NYP8 219 aa12.14□□□□□ -0.47
CHCHD3-202ENST00000423635 PTGES3LE9PB15 166 aa12.13□□□□□ -0.47
CHCHD3-202ENST00000423635 CTSGP08311 255 aa12.13□□□□□ -0.47
CHCHD3-202ENST00000423635 TFPI2P48307 235 aa12.13□□□□□ -0.47
CHCHD3-202ENST00000423635 WT1-ASQ06250 92 aa12.13□□□□□ -0.47
CHCHD3-202ENST00000423635 MSMO1Q15800 293 aa12.13□□□□□ -0.47
CHCHD3-202ENST00000423635 LGALS9BQ3B8N2 356 aa12.13□□□□□ -0.47
CHCHD3-202ENST00000423635 Q6ZTC4 211 aa12.13□□□□□ -0.47
CHCHD3-202ENST00000423635 HSD17B13Q7Z5P4 300 aaPredicted RBP12.13□□□□□ -0.47
CHCHD3-202ENST00000423635 TMEM116Q8NCL8 245 aa12.13□□□□□ -0.47
CHCHD3-202ENST00000423635 OR10C1Q96KK4 312 aa12.13□□□□□ -0.47
CHCHD3-202ENST00000423635 QTRT1Q9BXR0 403 aaKnown RBP12.13□□□□□ -0.47
CHCHD3-202ENST00000423635 HPRT1P00492 218 aa12.12□□□□□ -0.47
CHCHD3-202ENST00000423635 P0DMU3 169 aa12.12□□□□□ -0.47
CHCHD3-202ENST00000423635 FAM231AP0DMU4 169 aa12.12□□□□□ -0.47
CHCHD3-202ENST00000423635 FAM231CP0DMU5 169 aa12.12□□□□□ -0.47
CHCHD3-202ENST00000423635 OR13C7P0DN81 318 aa12.12□□□□□ -0.47
CHCHD3-202ENST00000423635 FABP5Q01469 135 aa12.12□□□□□ -0.47
CHCHD3-202ENST00000423635 CDNFQ49AH0 187 aa12.12□□□□□ -0.47
CHCHD3-202ENST00000423635 SPAG16Q8N0X2 631 aa12.12□□□□□ -0.47
CHCHD3-202ENST00000423635 IGHV4-28A0A0C4DH34 117 aa12.11□□□□□ -0.47
CHCHD3-202ENST00000423635 IFITM5A6NNB3 132 aa12.11□□□□□ -0.47
CHCHD3-202ENST00000423635 K7EIM0 57 aa12.11□□□□□ -0.47
CHCHD3-202ENST00000423635 DFFBO76075 338 aa12.11□□□□□ -0.47
CHCHD3-202ENST00000423635 TRAPPC2P0DI81 140 aa12.11□□□□□ -0.47
CHCHD3-202ENST00000423635 TRAPPC2BP0DI82 140 aa12.11□□□□□ -0.47
CHCHD3-202ENST00000423635 MIFP14174 115 aa12.11□□□□□ -0.47
CHCHD3-202ENST00000423635 NQO2P16083 231 aa12.11□□□□□ -0.47
CHCHD3-202ENST00000423635 PAFAH1B2P68402 229 aa12.11□□□□□ -0.47
CHCHD3-202ENST00000423635 HACD4Q5VWC8 232 aa12.11□□□□□ -0.47
CHCHD3-202ENST00000423635 ZBTB34Q8NCN2 500 aa12.11□□□□□ -0.47
CHCHD3-202ENST00000423635 CMTM3Q96MX0 182 aa12.11□□□□□ -0.47
CHCHD3-202ENST00000423635 F11RQ9Y624 299 aaKnown RBP12.11□□□□□ -0.47
CHCHD3-202ENST00000423635 IGKV3-7A0A075B6H7 116 aa12.11□□□□□ -0.47
CHCHD3-202ENST00000423635 IGHV3-21A0A0B4J1V1 117 aa12.11□□□□□ -0.47
CHCHD3-202ENST00000423635 TEX50A0A1B0GTY4 177 aa12.11□□□□□ -0.47
CHCHD3-202ENST00000423635 ZNF705EA8MWA4 302 aaPredicted RBP12.11□□□□□ -0.47
CHCHD3-202ENST00000423635 M0R2N4 97 aa12.11□□□□□ -0.47
CHCHD3-202ENST00000423635 TNFSF12O43508 249 aa12.11□□□□□ -0.47
CHCHD3-202ENST00000423635 AMBPP02760 352 aa12.11□□□□□ -0.47
CHCHD3-202ENST00000423635 CD5P06127 495 aa12.11□□□□□ -0.47
CHCHD3-202ENST00000423635 GIG44P09565 113 aaPredicted RBP12.11□□□□□ -0.47
CHCHD3-202ENST00000423635 RELQ04864 619 aaPredicted RBP12.11□□□□□ -0.47
CHCHD3-202ENST00000423635 ZNF773Q6PK81 442 aa12.11□□□□□ -0.47
CHCHD3-202ENST00000423635 GBGT1Q8N5D6 347 aa12.11□□□□□ -0.47
CHCHD3-202ENST00000423635 DGCR14Q96DF8 476 aaKnown RBP12.11□□□□□ -0.47
CHCHD3-202ENST00000423635 ACOT13Q9NPJ3 140 aa12.11□□□□□ -0.47
CHCHD3-202ENST00000423635 CCL28Q9NRJ3 127 aa12.11□□□□□ -0.47
CHCHD3-202ENST00000423635 ANXA10Q9UJ72 324 aa12.11□□□□□ -0.47
CHCHD3-202ENST00000423635 ELOA3CA0A087WX78 387 aaPredicted RBP12.1□□□□□ -0.47
CHCHD3-202ENST00000423635 TRAV14DV4A0A0A6YYC5 116 aa12.1□□□□□ -0.47
CHCHD3-202ENST00000423635 TRAV1-2A0A0B4J238 106 aa12.1□□□□□ -0.47
CHCHD3-202ENST00000423635 PDCD5O14737 125 aa12.1□□□□□ -0.47
CHCHD3-202ENST00000423635 HSMCR30P0CW71 290 aa12.1□□□□□ -0.47
CHCHD3-202ENST00000423635 OR10A3P58181 314 aa12.1□□□□□ -0.47
CHCHD3-202ENST00000423635 Q56UQ5 140 aa12.1□□□□□ -0.47
CHCHD3-202ENST00000423635 TMEM41BQ5BJD5 291 aa12.1□□□□□ -0.47
CHCHD3-202ENST00000423635 CENPSQ8N2Z9 138 aa12.1□□□□□ -0.47
CHCHD3-202ENST00000423635 UBAC2Q8NBM4 344 aa12.1□□□□□ -0.47
CHCHD3-202ENST00000423635 ATG5Q9H1Y0 275 aa12.1□□□□□ -0.47
CHCHD3-202ENST00000423635 NDUFA4L2Q9NRX3 87 aa12.1□□□□□ -0.47
CHCHD3-202ENST00000423635 TMEM140Q9NV12 185 aa12.1□□□□□ -0.47
CHCHD3-202ENST00000423635 PLA2G2EQ9NZK7 142 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms