RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 IGLV11-55A0A075B6I3 123 aa5.73□□□□□ -1.49
LSM5-202ENST00000409292 TMEM272A0A1B0GTI8 110 aa5.73□□□□□ -1.49
LSM5-202ENST00000409292 K7EMT4 169 aa5.73□□□□□ -1.49
LSM5-202ENST00000409292 RAB27BO00194 218 aa5.73□□□□□ -1.49
LSM5-202ENST00000409292 NDUFA4O00483 81 aa5.73□□□□□ -1.49
LSM5-202ENST00000409292 MFNGO00587 321 aa5.73□□□□□ -1.49
LSM5-202ENST00000409292 HLA-DQB1P01920 261 aa5.73□□□□□ -1.49
LSM5-202ENST00000409292 REG1AP05451 166 aa5.73□□□□□ -1.49
LSM5-202ENST00000409292 IL6RP08887 468 aaPredicted RBP5.73□□□□□ -1.49
LSM5-202ENST00000409292 AREGP15514 252 aa5.73□□□□□ -1.49
LSM5-202ENST00000409292 GNG2P59768 71 aa5.73□□□□□ -1.49
LSM5-202ENST00000409292 ERVK-16P61578 105 aa5.73□□□□□ -1.49
LSM5-202ENST00000409292 RELQ04864 619 aaPredicted RBP5.73□□□□□ -1.49
LSM5-202ENST00000409292 TMEM187Q14656 261 aa5.73□□□□□ -1.49
LSM5-202ENST00000409292 ANKRD39Q53RE8 183 aa5.73□□□□□ -1.49
LSM5-202ENST00000409292 SLC25A24Q6NUK1 477 aa5.73□□□□□ -1.49
LSM5-202ENST00000409292 CNIH2Q6PI25 160 aa5.73□□□□□ -1.49
LSM5-202ENST00000409292 UNQ9165/PRO28630Q6UXU0 137 aa5.73□□□□□ -1.49
LSM5-202ENST00000409292 PUSL1Q8N0Z8 303 aaKnown RBP5.73□□□□□ -1.49
LSM5-202ENST00000409292 ZBTB34Q8NCN2 500 aa5.73□□□□□ -1.49
LSM5-202ENST00000409292 OR11H2Q8NH07 326 aa5.73□□□□□ -1.49
LSM5-202ENST00000409292 ZNF502Q8TBZ5 544 aa5.73□□□□□ -1.49
LSM5-202ENST00000409292 C11orf68Q9H3H3 251 aaKnown RBP5.73□□□□□ -1.49
LSM5-202ENST00000409292 BET1LQ9NYM9 111 aa5.73□□□□□ -1.49
LSM5-202ENST00000409292 TAS2R8Q9NYW2 309 aa5.73□□□□□ -1.49
LSM5-202ENST00000409292 IGHV3-35A0A0C4DH35 117 aa5.72□□□□□ -1.49
LSM5-202ENST00000409292 MFSD2BA6NFX1 497 aa5.72□□□□□ -1.49
LSM5-202ENST00000409292 IGLL5B9A064 214 aa5.72□□□□□ -1.49
LSM5-202ENST00000409292 NUPL2O15504 423 aaKnown RBP5.72□□□□□ -1.49
LSM5-202ENST00000409292 XRCC3O43542 346 aa5.72□□□□□ -1.49
LSM5-202ENST00000409292 YIF1AO95070 293 aa5.72□□□□□ -1.49
LSM5-202ENST00000409292 NQO2P16083 231 aa5.72□□□□□ -1.49
LSM5-202ENST00000409292 NFYAP23511 347 aaPredicted RBP5.72□□□□□ -1.49
LSM5-202ENST00000409292 TAS2R31P59538 309 aa5.72□□□□□ -1.49
LSM5-202ENST00000409292 NANOS2P60321 138 aaKnown RBP5.72□□□□□ -1.49
LSM5-202ENST00000409292 EWSR1Q01844 656 aaKnown RBP eCLIP5.72□□□□□ -1.49
LSM5-202ENST00000409292 PLA2G7Q13093 441 aa5.72□□□□□ -1.49
LSM5-202ENST00000409292 MSMO1Q15800 293 aa5.72□□□□□ -1.49
LSM5-202ENST00000409292 KLK9Q2XQG4 91 aa5.72□□□□□ -1.49
LSM5-202ENST00000409292 Q56UQ5 140 aa5.72□□□□□ -1.49
LSM5-202ENST00000409292 TMEM41BQ5BJD5 291 aa5.72□□□□□ -1.49
LSM5-202ENST00000409292 SPAG16Q8N0X2 631 aa5.72□□□□□ -1.49
LSM5-202ENST00000409292 UBAC2Q8NBM4 344 aa5.72□□□□□ -1.49
LSM5-202ENST00000409292 DMBX1Q8NFW5 382 aa5.72□□□□□ -1.49
LSM5-202ENST00000409292 C5orf30Q96GV9 206 aa5.72□□□□□ -1.49
LSM5-202ENST00000409292 QTRT1Q9BXR0 403 aaKnown RBP5.72□□□□□ -1.49
LSM5-202ENST00000409292 KRTAP4-11Q9BYQ6 195 aa5.72□□□□□ -1.49
LSM5-202ENST00000409292 ZNF436Q9C0F3 470 aaPredicted RBP5.72□□□□□ -1.49
LSM5-202ENST00000409292 C21orf62Q9NYP8 219 aa5.72□□□□□ -1.49
LSM5-202ENST00000409292 KLK9Q9UKQ9 250 aa5.72□□□□□ -1.49
LSM5-202ENST00000409292 OR2T8A6NH00 312 aa5.71□□□□□ -1.5
LSM5-202ENST00000409292 C15orf62A8K5M9 175 aa5.71□□□□□ -1.5
LSM5-202ENST00000409292 DNASE2O00115 360 aaPredicted RBP5.71□□□□□ -1.5
LSM5-202ENST00000409292 RBFOX2O43251 390 aaKnown RBP eCLIP5.71□□□□□ -1.5
LSM5-202ENST00000409292 RGS10O43665 173 aa5.71□□□□□ -1.5
LSM5-202ENST00000409292 SNAPC5O75971 98 aa5.71□□□□□ -1.5
LSM5-202ENST00000409292 HPRT1P00492 218 aa5.71□□□□□ -1.5
LSM5-202ENST00000409292 CA1P00915 261 aaPredicted RBP5.71□□□□□ -1.5
LSM5-202ENST00000409292 CTSDP07339 412 aaPredicted RBP5.71□□□□□ -1.5
LSM5-202ENST00000409292 FGF2P09038 288 aa5.71□□□□□ -1.5
LSM5-202ENST00000409292 TRAPPC2P0DI81 140 aa5.71□□□□□ -1.5
LSM5-202ENST00000409292 TRAPPC2BP0DI82 140 aa5.71□□□□□ -1.5
LSM5-202ENST00000409292 OR13C7P0DN81 318 aa5.71□□□□□ -1.5
LSM5-202ENST00000409292 RPA2P15927 270 aa5.71□□□□□ -1.5
LSM5-202ENST00000409292 RAB3BP20337 219 aa5.71□□□□□ -1.5
LSM5-202ENST00000409292 TFPI2P48307 235 aa5.71□□□□□ -1.5
LSM5-202ENST00000409292 MFAP2P55001 183 aa5.71□□□□□ -1.5
LSM5-202ENST00000409292 RPS25P62851 125 aaKnown RBP5.71□□□□□ -1.5
LSM5-202ENST00000409292 RPL30P62888 115 aaKnown RBP5.71□□□□□ -1.5
LSM5-202ENST00000409292 MLLT11Q13015 90 aaPredicted RBP5.71□□□□□ -1.5
LSM5-202ENST00000409292 IRF3Q14653 427 aa5.71□□□□□ -1.5
LSM5-202ENST00000409292 ODF3L2Q3SX64 289 aa5.71□□□□□ -1.5
LSM5-202ENST00000409292 TIMM50Q3ZCQ8 353 aa5.71□□□□□ -1.5
LSM5-202ENST00000409292 CDNFQ49AH0 187 aa5.71□□□□□ -1.5
LSM5-202ENST00000409292 LCE5AQ5TCM9 118 aa5.71□□□□□ -1.5
LSM5-202ENST00000409292 HACD4Q5VWC8 232 aa5.71□□□□□ -1.5
LSM5-202ENST00000409292 GDPD1Q8N9F7 314 aa5.71□□□□□ -1.5
LSM5-202ENST00000409292 TSPAN14Q8NG11 270 aa5.71□□□□□ -1.5
LSM5-202ENST00000409292 OR1L8Q8NGR8 309 aa5.71□□□□□ -1.5
LSM5-202ENST00000409292 TMEM56Q96MV1 263 aa5.71□□□□□ -1.5
LSM5-202ENST00000409292 GINS3Q9BRX5 216 aa5.71□□□□□ -1.5
LSM5-202ENST00000409292 HINT2Q9BX68 163 aa5.71□□□□□ -1.5
LSM5-202ENST00000409292 TMEM231Q9H6L2 316 aa5.71□□□□□ -1.5
LSM5-202ENST00000409292 FKBP14Q9NWM8 211 aa5.71□□□□□ -1.5
LSM5-202ENST00000409292 KCNK7Q9Y2U2 307 aa5.71□□□□□ -1.5
LSM5-202ENST00000409292 ALMS1Q8TCU4 4167 aa5.7□□□□□ -1.5
LSM5-202ENST00000409292 TRAV1-2A0A0B4J238 106 aa5.7□□□□□ -1.5
LSM5-202ENST00000409292 TRAV10A0A0B4J240 114 aa5.7□□□□□ -1.5
LSM5-202ENST00000409292 IFITM5A6NNB3 132 aa5.7□□□□□ -1.5
LSM5-202ENST00000409292 UPK2O00526 184 aa5.7□□□□□ -1.5
LSM5-202ENST00000409292 EBAG9O00559 213 aa5.7□□□□□ -1.5
LSM5-202ENST00000409292 SCGB2A1O75556 95 aa5.7□□□□□ -1.5
LSM5-202ENST00000409292 DFFBO76075 338 aa5.7□□□□□ -1.5
LSM5-202ENST00000409292 FCGR2BP31994 310 aaPredicted RBP5.7□□□□□ -1.5
LSM5-202ENST00000409292 OR2B8PP59922 312 aa5.7□□□□□ -1.5
LSM5-202ENST00000409292 RPL11P62913 178 aaKnown RBP5.7□□□□□ -1.5
LSM5-202ENST00000409292 KIR3DS1Q14943 382 aa5.7□□□□□ -1.5
LSM5-202ENST00000409292 SOHLH1Q5JUK2 328 aa5.7□□□□□ -1.5
LSM5-202ENST00000409292 C19orf35Q6ZS72 473 aa5.7□□□□□ -1.5
LSM5-202ENST00000409292 TPRA1Q86W33 373 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms