RNA–Protein interactions for RNA: ENST00000405853.7

NR1H3-203, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-203ENST00000405853 SPINK9Q5DT21 86 aa12.14□□□□□ -0.47
NR1H3-203ENST00000405853 TMEM182Q6ZP80 229 aaPredicted RBP12.14□□□□□ -0.47
NR1H3-203ENST00000405853 PPP1R27Q86WC6 154 aa12.14□□□□□ -0.47
NR1H3-203ENST00000405853 OR2T10Q8NGZ9 312 aa12.14□□□□□ -0.47
NR1H3-203ENST00000405853 ZNF430Q9H8G1 570 aaPredicted RBP12.14□□□□□ -0.47
NR1H3-203ENST00000405853 WDR83OSQ9Y284 106 aa12.14□□□□□ -0.47
NR1H3-203ENST00000405853 SIGLEC9Q9Y336 463 aa12.14□□□□□ -0.47
NR1H3-203ENST00000405853 TRAV1-1A0A0B4J248 108 aa12.13□□□□□ -0.47
NR1H3-203ENST00000405853 IGHV4-61A0A0C4DH41 118 aa12.13□□□□□ -0.47
NR1H3-203ENST00000405853 UBE2L5PA0A1B0GUS4 154 aa12.13□□□□□ -0.47
NR1H3-203ENST00000405853 FAM157AC9JC47 383 aa12.13□□□□□ -0.47
NR1H3-203ENST00000405853 I3L521 148 aa12.13□□□□□ -0.47
NR1H3-203ENST00000405853 NDUFA3O95167 84 aa12.13□□□□□ -0.47
NR1H3-203ENST00000405853 HBE1P02100 147 aa12.13□□□□□ -0.47
NR1H3-203ENST00000405853 IFNA4P05014 189 aa12.13□□□□□ -0.47
NR1H3-203ENST00000405853 PLA2G2AP14555 144 aa12.13□□□□□ -0.47
NR1H3-203ENST00000405853 RAB2AP61019 212 aa12.13□□□□□ -0.47
NR1H3-203ENST00000405853 ZNF787Q6DD87 383 aa12.13□□□□□ -0.47
NR1H3-203ENST00000405853 ZNF709Q8N972 641 aa12.13□□□□□ -0.47
NR1H3-203ENST00000405853 ZNF114Q8NC26 417 aa12.13□□□□□ -0.47
NR1H3-203ENST00000405853 CACNG8Q8WXS5 425 aa12.13□□□□□ -0.47
NR1H3-203ENST00000405853 SMDT1Q9H4I9 107 aa12.13□□□□□ -0.47
NR1H3-203ENST00000405853 NPVFQ9HCQ7 196 aa12.13□□□□□ -0.47
NR1H3-203ENST00000405853 ABCA2Q9BZC7 2435 aa12.12□□□□□ -0.47
NR1H3-203ENST00000405853 RRHO14718 337 aa12.12□□□□□ -0.47
NR1H3-203ENST00000405853 TSPAN15O95858 294 aa12.12□□□□□ -0.47
NR1H3-203ENST00000405853 CA2P00918 260 aa12.12□□□□□ -0.47
NR1H3-203ENST00000405853 SNRNP70P08621 437 aaKnown RBP12.12□□□□□ -0.47
NR1H3-203ENST00000405853 ZP3P21754 424 aa12.12□□□□□ -0.47
NR1H3-203ENST00000405853 DLX1P56177 255 aa12.12□□□□□ -0.47
NR1H3-203ENST00000405853 KLRD1Q13241 179 aa12.12□□□□□ -0.47
NR1H3-203ENST00000405853 LDLRAD2Q5SZI1 272 aa12.12□□□□□ -0.47
NR1H3-203ENST00000405853 RNASEH2CQ8TDP1 164 aaKnown RBP12.12□□□□□ -0.47
NR1H3-203ENST00000405853 KIAA1456Q9P272 454 aa12.12□□□□□ -0.47
NR1H3-203ENST00000405853 IGHV4-30-2A0A087WSY4 118 aa12.11□□□□□ -0.47
NR1H3-203ENST00000405853 IGHV3-72A0A0B4J1Y9 119 aa12.11□□□□□ -0.47
NR1H3-203ENST00000405853 A0A1B0GW64 132 aa12.11□□□□□ -0.47
NR1H3-203ENST00000405853 A1L4Q6 167 aa12.11□□□□□ -0.47
NR1H3-203ENST00000405853 B4DSR2 109 aa12.11□□□□□ -0.47
NR1H3-203ENST00000405853 NBR2O15453 112 aa12.11□□□□□ -0.47
NR1H3-203ENST00000405853 RNASE2P10153 161 aaKnown RBP12.11□□□□□ -0.47
NR1H3-203ENST00000405853 FGF7P21781 194 aa12.11□□□□□ -0.47
NR1H3-203ENST00000405853 BRS3P32247 399 aa12.11□□□□□ -0.47
NR1H3-203ENST00000405853 GPX4P36969 197 aaPredicted RBP12.11□□□□□ -0.47
NR1H3-203ENST00000405853 RPL27AP46776 148 aaKnown RBP12.11□□□□□ -0.47
NR1H3-203ENST00000405853 RUNX1Q01196 453 aa12.11□□□□□ -0.47
NR1H3-203ENST00000405853 MRGPRG-AS1Q2M3A8 158 aa12.11□□□□□ -0.47
NR1H3-203ENST00000405853 TOR2AQ5JU69 321 aa12.11□□□□□ -0.47
NR1H3-203ENST00000405853 TMEM170AQ8WVE7 144 aa12.11□□□□□ -0.47
NR1H3-203ENST00000405853 PERPQ96FX8 193 aa12.11□□□□□ -0.47
NR1H3-203ENST00000405853 HINT2Q9BX68 163 aa12.11□□□□□ -0.47
NR1H3-203ENST00000405853 NPCDR1Q9BY65 106 aa12.11□□□□□ -0.47
NR1H3-203ENST00000405853 METTL1Q9UBP6 276 aaKnown RBP12.11□□□□□ -0.47
NR1H3-203ENST00000405853 SPG11Q96JI7 2443 aa12.11□□□□□ -0.47
NR1H3-203ENST00000405853 TRAV20A0A0B4J274 112 aa12.1□□□□□ -0.47
NR1H3-203ENST00000405853 CORTO00230 105 aa12.1□□□□□ -0.47
NR1H3-203ENST00000405853 ZNF616Q08AN1 781 aa12.1□□□□□ -0.47
NR1H3-203ENST00000405853 RAB31Q13636 194 aa12.1□□□□□ -0.47
NR1H3-203ENST00000405853 CLEC12BQ2HXU8 276 aa12.1□□□□□ -0.47
NR1H3-203ENST00000405853 TMEM41BQ5BJD5 291 aa12.1□□□□□ -0.47
NR1H3-203ENST00000405853 PVRIGQ6DKI7 326 aa12.1□□□□□ -0.47
NR1H3-203ENST00000405853 LHFPL4Q7Z7J7 247 aa12.1□□□□□ -0.47
NR1H3-203ENST00000405853 FAM213BQ8TBF2 198 aa12.1□□□□□ -0.47
NR1H3-203ENST00000405853 MBD6Q96DN6 1003 aa12.1□□□□□ -0.47
NR1H3-203ENST00000405853 RBMXL1Q96E39 390 aaKnown RBP12.1□□□□□ -0.47
NR1H3-203ENST00000405853 HRH4Q9H3N8 390 aa12.1□□□□□ -0.47
NR1H3-203ENST00000405853 C1RLQ9NZP8 487 aa12.1□□□□□ -0.47
NR1H3-203ENST00000405853 HILPDAQ9Y5L2 63 aa12.1□□□□□ -0.47
NR1H3-203ENST00000405853 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.1□□□□□ -0.472e-6■■■■■ 35.7
NR1H3-203ENST00000405853 MSMBP08118 114 aa12.09□□□□□ -0.47
NR1H3-203ENST00000405853 H2AFB1P0C5Y9 115 aa12.09□□□□□ -0.47
NR1H3-203ENST00000405853 TREML4Q6UXN2 200 aa12.09□□□□□ -0.47
NR1H3-203ENST00000405853 Q8N6K4 173 aa12.09□□□□□ -0.47
NR1H3-203ENST00000405853 MBD3L1Q8WWY6 194 aa12.09□□□□□ -0.47
NR1H3-203ENST00000405853 EAF1Q96JC9 268 aaPredicted RBP12.09□□□□□ -0.47
NR1H3-203ENST00000405853 RITA1Q96K30 269 aa12.09□□□□□ -0.47
NR1H3-203ENST00000405853 RSG1Q9BU20 258 aa12.09□□□□□ -0.47
NR1H3-203ENST00000405853 PBDC1Q9BVG4 233 aa12.09□□□□□ -0.47
NR1H3-203ENST00000405853 LSM4Q9Y4Z0 139 aaKnown RBP12.09□□□□□ -0.47
NR1H3-203ENST00000405853 ANKRD17O75179 2603 aaKnown RBP12.09□□□□□ -0.47
NR1H3-203ENST00000405853 MED13LQ71F56 2210 aa12.09□□□□□ -0.47
NR1H3-203ENST00000405853 NPFFO15130 113 aa12.08□□□□□ -0.47
NR1H3-203ENST00000405853 IGKV1D-33P01593 117 aa12.08□□□□□ -0.47
NR1H3-203ENST00000405853 IGKV1-33P01594 117 aa12.08□□□□□ -0.47
NR1H3-203ENST00000405853 FAM106CPP0CH98 169 aa12.08□□□□□ -0.47
NR1H3-203ENST00000405853 OPRK1P41145 380 aa12.08□□□□□ -0.47
NR1H3-203ENST00000405853 PMS2P11Q13670 270 aa12.08□□□□□ -0.47
NR1H3-203ENST00000405853 MMDQ15546 238 aa12.08□□□□□ -0.47
NR1H3-203ENST00000405853 SSX2Q16385 188 aa12.08□□□□□ -0.47
NR1H3-203ENST00000405853 ETFRF1Q6IPR1 90 aa12.08□□□□□ -0.47
NR1H3-203ENST00000405853 TEPPQ6URK8 271 aa12.08□□□□□ -0.47
NR1H3-203ENST00000405853 PRSS57Q6UWY2 283 aa12.08□□□□□ -0.47
NR1H3-203ENST00000405853 TMEM144Q7Z5S9 345 aa12.08□□□□□ -0.47
NR1H3-203ENST00000405853 OR1L6Q8NGR2 347 aa12.08□□□□□ -0.47
NR1H3-203ENST00000405853 PLXNB1O43157 2135 aa12.08□□□□□ -0.48
NR1H3-203ENST00000405853 CGB1A6NKQ9 187 aa12.08□□□□□ -0.48
NR1H3-203ENST00000405853 MYOD1P15172 320 aa12.08□□□□□ -0.48
NR1H3-203ENST00000405853 CD69Q07108 199 aa12.08□□□□□ -0.48
NR1H3-203ENST00000405853 LOXL1Q08397 574 aaPredicted RBP12.08□□□□□ -0.48
NR1H3-203ENST00000405853 TNXAQ16473 311 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms