RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.53□□□□□ -0.883e-10■■■■□ 25.8
GTF2A2-202ENST00000396060 TRAV20A0A0B4J274 112 aa9.53□□□□□ -0.88
GTF2A2-202ENST00000396060 CENPVL3A0A0U1RRI6 287 aa9.53□□□□□ -0.88
GTF2A2-202ENST00000396060 MFSD2BA6NFX1 497 aa9.53□□□□□ -0.88
GTF2A2-202ENST00000396060 CGB1A6NKQ9 187 aa9.53□□□□□ -0.88
GTF2A2-202ENST00000396060 RRHO14718 337 aa9.53□□□□□ -0.88
GTF2A2-202ENST00000396060 MSMBP08118 114 aa9.53□□□□□ -0.88
GTF2A2-202ENST00000396060 MYOD1P15172 320 aa9.53□□□□□ -0.88
GTF2A2-202ENST00000396060 NPY1RP25929 384 aa9.53□□□□□ -0.88
GTF2A2-202ENST00000396060 F2RL1P55085 397 aa9.53□□□□□ -0.88
GTF2A2-202ENST00000396060 SERF2P84101 59 aa9.53□□□□□ -0.88
GTF2A2-202ENST00000396060 LOXL1Q08397 574 aaPredicted RBP9.53□□□□□ -0.88
GTF2A2-202ENST00000396060 PVRIGQ6DKI7 326 aa9.53□□□□□ -0.88
GTF2A2-202ENST00000396060 OR8G2PQ6IF36 304 aa9.53□□□□□ -0.88
GTF2A2-202ENST00000396060 DPPA3Q6W0C5 159 aa9.53□□□□□ -0.88
GTF2A2-202ENST00000396060 ETV3LQ6ZN32 361 aa9.53□□□□□ -0.88
GTF2A2-202ENST00000396060 COMMD7Q86VX2 200 aa9.53□□□□□ -0.88
GTF2A2-202ENST00000396060 LILRB2Q8N423 598 aa9.53□□□□□ -0.88
GTF2A2-202ENST00000396060 OR2G3Q8NGZ4 309 aa9.53□□□□□ -0.88
GTF2A2-202ENST00000396060 OR2T10Q8NGZ9 312 aa9.53□□□□□ -0.88
GTF2A2-202ENST00000396060 EAF1Q96JC9 268 aaPredicted RBP9.53□□□□□ -0.88
GTF2A2-202ENST00000396060 CXorf58Q96LI9 332 aa9.53□□□□□ -0.88
GTF2A2-202ENST00000396060 SRSF8Q9BRL6 282 aaKnown RBP9.53□□□□□ -0.88
GTF2A2-202ENST00000396060 SH3BGRL3Q9H299 93 aa9.53□□□□□ -0.88
GTF2A2-202ENST00000396060 UQCC1Q9NVA1 299 aa9.53□□□□□ -0.88
GTF2A2-202ENST00000396060 PFDN2Q9UHV9 154 aa9.53□□□□□ -0.88
GTF2A2-202ENST00000396060 HILPDAQ9Y5L2 63 aa9.53□□□□□ -0.88
GTF2A2-202ENST00000396060 TENM4Q6N022 2769 aa9.52□□□□□ -0.89
GTF2A2-202ENST00000396060 FBN2P35556 2912 aa9.52□□□□□ -0.89
GTF2A2-202ENST00000396060 ZNF705EA8MWA4 302 aaPredicted RBP9.52□□□□□ -0.89
GTF2A2-202ENST00000396060 SOX15O60248 233 aa9.52□□□□□ -0.89
GTF2A2-202ENST00000396060 ERHP84090 104 aaKnown RBP9.52□□□□□ -0.89
GTF2A2-202ENST00000396060 CRYBG3Q68DQ2 2970 aa9.52□□□□□ -0.89
GTF2A2-202ENST00000396060 BTNL8Q6UX41 500 aa9.52□□□□□ -0.89
GTF2A2-202ENST00000396060 PPP1R27Q86WC6 154 aa9.52□□□□□ -0.89
GTF2A2-202ENST00000396060 MRPL41Q8IXM3 137 aaKnown RBP9.52□□□□□ -0.89
GTF2A2-202ENST00000396060 DYNAPQ8N1N2 210 aa9.52□□□□□ -0.89
GTF2A2-202ENST00000396060 TAF15Q92804 592 aaKnown RBP eCLIP9.52□□□□□ -0.89
GTF2A2-202ENST00000396060 A0A1B0GW64 132 aa9.51□□□□□ -0.89
GTF2A2-202ENST00000396060 RAB19A4D1S5 217 aa9.51□□□□□ -0.89
GTF2A2-202ENST00000396060 NPFFO15130 113 aa9.51□□□□□ -0.89
GTF2A2-202ENST00000396060 MPDU1O75352 247 aa9.51□□□□□ -0.89
GTF2A2-202ENST00000396060 CA2P00918 260 aa9.51□□□□□ -0.89
GTF2A2-202ENST00000396060 RNASE2P10153 161 aaKnown RBP9.51□□□□□ -0.89
GTF2A2-202ENST00000396060 COMPP49747 757 aaPredicted RBP9.51□□□□□ -0.89
GTF2A2-202ENST00000396060 SSX2Q16385 188 aa9.51□□□□□ -0.89
GTF2A2-202ENST00000396060 ZNF114Q8NC26 417 aa9.51□□□□□ -0.89
GTF2A2-202ENST00000396060 MARC2Q969Z3 335 aa9.51□□□□□ -0.89
GTF2A2-202ENST00000396060 METTL1Q9UBP6 276 aaKnown RBP9.51□□□□□ -0.89
GTF2A2-202ENST00000396060 WDR83OSQ9Y284 106 aa9.51□□□□□ -0.89
GTF2A2-202ENST00000396060 PLXNB1O43157 2135 aa9.51□□□□□ -0.89
GTF2A2-202ENST00000396060 IGHV1-69DA0A0B4J2H0 117 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 E7EUB6 86 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 NBR2O15453 112 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 IGKV1D-33P01593 117 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 IGKV1-33P01594 117 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 IGHV1-69P01742 117 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 SNRNP70P08621 437 aaKnown RBP9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 CNTFRP26992 372 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 BRS3P32247 399 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 GPX4P36969 197 aaPredicted RBP9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 PJVKQ0ZLH3 352 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 PXDC1Q5TGL8 231 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 SLC25A24Q6NUK1 477 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 IL34Q6ZMJ4 242 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 LINC01356Q8N9X3 169 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 CACNG8Q8WXS5 425 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 HINT2Q9BX68 163 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 TPSG1Q9NRR2 321 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 IGLC7A0M8Q6 106 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 J3QLI3 93 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 IFNA4P05014 189 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 FAM106CPP0CH98 169 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 SAA4P35542 130 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 SNCAP37840 140 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 RPL27AP46776 148 aaKnown RBP9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 SUB1P53999 127 aaKnown RBP eCLIP9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 SSBP2P81877 361 aaPredicted RBP9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 RUNX1Q01196 453 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 WT1-ASQ06250 92 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 AANATQ16613 207 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 LCE2DQ5TA82 110 aaPredicted RBP9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 UQCC3Q6UW78 93 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 COMMD1Q8N668 190 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 OR10W1Q8NGF6 305 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 RNASEH2CQ8TDP1 164 aaKnown RBP9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 C17orf50Q8WW18 174 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 MEGF9Q9H1U4 602 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 FBXL15Q9H469 300 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 NPVFQ9HCQ7 196 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 CELSR2Q9HCU4 2923 aa9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 LSM4Q9Y4Z0 139 aaKnown RBP9.5□□□□□ -0.89
GTF2A2-202ENST00000396060 APCP25054 2843 aa9.49□□□□□ -0.89
GTF2A2-202ENST00000396060 TRAV1-1A0A0B4J248 108 aa9.49□□□□□ -0.89
GTF2A2-202ENST00000396060 A0A1W2PRD5 423 aa9.49□□□□□ -0.89
GTF2A2-202ENST00000396060 A0A1W2PRF3 423 aa9.49□□□□□ -0.89
GTF2A2-202ENST00000396060 A0A1W2PRM7 423 aa9.49□□□□□ -0.89
GTF2A2-202ENST00000396060 ANKRD34BA5PLL1 514 aa9.49□□□□□ -0.89
GTF2A2-202ENST00000396060 ACTL6BO94805 426 aa9.49□□□□□ -0.89
GTF2A2-202ENST00000396060 OPN1MWP04001 364 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms