RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 OR5B3Q8NH48 314 aa15.32■□□□□ 0.04
CLDND1-203ENST00000394181 PSMG3Q9BT73 122 aaPredicted RBP15.32■□□□□ 0.04
CLDND1-203ENST00000394181 SIRPDQ9H106 197 aa15.32■□□□□ 0.04
CLDND1-203ENST00000394181 FKBP11Q9NYL4 201 aa15.32■□□□□ 0.04
CLDND1-203ENST00000394181 DPM3Q9P2X0 92 aa15.32■□□□□ 0.04
CLDND1-203ENST00000394181 PLXNB1O43157 2135 aa15.31■□□□□ 0.04
CLDND1-203ENST00000394181 TMEM218A2RU14 115 aa15.31■□□□□ 0.04
CLDND1-203ENST00000394181 SMCO3A2RU48 225 aa15.31■□□□□ 0.04
CLDND1-203ENST00000394181 NUDT19A8MXV4 375 aa15.31■□□□□ 0.04
CLDND1-203ENST00000394181 IGKV1D-33P01593 117 aa15.31■□□□□ 0.04
CLDND1-203ENST00000394181 IGKV1-33P01594 117 aa15.31■□□□□ 0.04
CLDND1-203ENST00000394181 HOXB4P17483 251 aaPredicted RBP15.31■□□□□ 0.04
CLDND1-203ENST00000394181 CD1BP29016 333 aa15.31■□□□□ 0.04
CLDND1-203ENST00000394181 ACSM6Q6P461 480 aa15.31■□□□□ 0.04
CLDND1-203ENST00000394181 SFT2D1Q8WV19 159 aa15.31■□□□□ 0.04
CLDND1-203ENST00000394181 C1orf159Q96HA4 380 aa15.31■□□□□ 0.04
CLDND1-203ENST00000394181 IGHV2-70DA0A0C4DH43 119 aa15.31■□□□□ 0.04
CLDND1-203ENST00000394181 FAM157AC9JC47 383 aa15.31■□□□□ 0.04
CLDND1-203ENST00000394181 LY86O95711 162 aa15.31■□□□□ 0.04
CLDND1-203ENST00000394181 H2AFB1P0C5Y9 115 aa15.31■□□□□ 0.04
CLDND1-203ENST00000394181 ATP5J2P56134 94 aa15.31■□□□□ 0.04
CLDND1-203ENST00000394181 C1orf122Q6ZSJ8 110 aa15.31■□□□□ 0.04
CLDND1-203ENST00000394181 CCDC28AQ8IWP9 274 aa15.31■□□□□ 0.04
CLDND1-203ENST00000394181 NPCDR1Q9BY65 106 aa15.31■□□□□ 0.04
CLDND1-203ENST00000394181 IGHV4-61A0A0C4DH41 118 aa15.3■□□□□ 0.04
CLDND1-203ENST00000394181 APOC3P02656 99 aa15.3■□□□□ 0.04
CLDND1-203ENST00000394181 COL8A1P27658 744 aa15.3■□□□□ 0.04
CLDND1-203ENST00000394181 LGALS7P47929 136 aa15.3■□□□□ 0.04
CLDND1-203ENST00000394181 PSG5Q15238 335 aa15.3■□□□□ 0.04
CLDND1-203ENST00000394181 VMA21Q3ZAQ7 101 aa15.3■□□□□ 0.04
CLDND1-203ENST00000394181 ARSJQ5FYB0 599 aaPredicted RBP15.3■□□□□ 0.04
CLDND1-203ENST00000394181 OR1L8Q8NGR8 309 aa15.3■□□□□ 0.04
CLDND1-203ENST00000394181 FAM168AQ92567 244 aa15.3■□□□□ 0.04
CLDND1-203ENST00000394181 CD5P06127 495 aa15.29■□□□□ 0.04
CLDND1-203ENST00000394181 CRYGBP07316 175 aa15.29■□□□□ 0.04
CLDND1-203ENST00000394181 RAB2AP61019 212 aa15.29■□□□□ 0.04
CLDND1-203ENST00000394181 RAB11AP62491 216 aa15.29■□□□□ 0.04
CLDND1-203ENST00000394181 WT1-ASQ06250 92 aa15.29■□□□□ 0.04
CLDND1-203ENST00000394181 MLANAQ16655 118 aa15.29■□□□□ 0.04
CLDND1-203ENST00000394181 TREML4Q6UXN2 200 aa15.29■□□□□ 0.04
CLDND1-203ENST00000394181 CENPVQ7Z7K6 275 aaPredicted RBP15.29■□□□□ 0.04
CLDND1-203ENST00000394181 KIR3DL3Q8N743 410 aa15.29■□□□□ 0.04
CLDND1-203ENST00000394181 OR4A5Q8NH83 315 aa15.29■□□□□ 0.04
CLDND1-203ENST00000394181 VSTM2AQ8TAG5 236 aa15.29■□□□□ 0.04
CLDND1-203ENST00000394181 PERPQ96FX8 193 aa15.29■□□□□ 0.04
CLDND1-203ENST00000394181 KPTNQ9Y664 436 aa15.29■□□□□ 0.04
CLDND1-203ENST00000394181 TENM4Q6N022 2769 aa15.29■□□□□ 0.04
CLDND1-203ENST00000394181 SSX2Q16385 188 aa15.29■□□□□ 0.04
CLDND1-203ENST00000394181 C10orf105Q8TEF2 133 aa15.29■□□□□ 0.04
CLDND1-203ENST00000394181 WDR83OSQ9Y284 106 aa15.29■□□□□ 0.04
CLDND1-203ENST00000394181 RNASE2P10153 161 aaKnown RBP15.28■□□□□ 0.04
CLDND1-203ENST00000394181 DEFA4P12838 97 aa15.28■□□□□ 0.04
CLDND1-203ENST00000394181 SERF2P84101 59 aa15.28■□□□□ 0.04
CLDND1-203ENST00000394181 ATRAIDQ6UW56 229 aa15.28■□□□□ 0.04
CLDND1-203ENST00000394181 CFHR4Q92496 578 aa15.28■□□□□ 0.04
CLDND1-203ENST00000394181 TBX15Q96SF7 602 aa15.28■□□□□ 0.04
CLDND1-203ENST00000394181 RARRES2Q99969 163 aa15.28■□□□□ 0.04
CLDND1-203ENST00000394181 UNKLQ9H9P5 680 aaKnown RBP15.28■□□□□ 0.04
CLDND1-203ENST00000394181 POLQO75417 2590 aa15.28■□□□□ 0.04
CLDND1-203ENST00000394181 IGHV4-30-2A0A087WSY4 118 aa15.28■□□□□ 0.04
CLDND1-203ENST00000394181 FCN1O00602 326 aa15.28■□□□□ 0.04
CLDND1-203ENST00000394181 TOX4O94842 621 aa15.28■□□□□ 0.04
CLDND1-203ENST00000394181 VENTXO95231 258 aa15.28■□□□□ 0.04
CLDND1-203ENST00000394181 APELAP0DMC3 54 aa15.28■□□□□ 0.04
CLDND1-203ENST00000394181 GUK1Q16774 197 aa15.28■□□□□ 0.04
CLDND1-203ENST00000394181 RPP25LQ8N5L8 163 aaKnown RBP15.28■□□□□ 0.04
CLDND1-203ENST00000394181 FBXL15Q9H469 300 aa15.28■□□□□ 0.04
CLDND1-203ENST00000394181 SIGLEC9Q9Y336 463 aa15.28■□□□□ 0.04
CLDND1-203ENST00000394181 TIMM9Q9Y5J7 89 aa15.28■□□□□ 0.04
CLDND1-203ENST00000394181 KMT2BQ9UMN6 2715 aaPredicted RBP15.27■□□□□ 0.04
CLDND1-203ENST00000394181 REG1AP05451 166 aa15.27■□□□□ 0.04
CLDND1-203ENST00000394181 COX6B1P14854 86 aa15.27■□□□□ 0.04
CLDND1-203ENST00000394181 PRSS8Q16651 343 aa15.27■□□□□ 0.04
CLDND1-203ENST00000394181 BSXQ3C1V8 233 aa15.27■□□□□ 0.04
CLDND1-203ENST00000394181 TMEM41BQ5BJD5 291 aa15.27■□□□□ 0.04
CLDND1-203ENST00000394181 LCN15Q6UWW0 184 aa15.27■□□□□ 0.04
CLDND1-203ENST00000394181 TEX45Q8NA69 505 aa15.27■□□□□ 0.04
CLDND1-203ENST00000394181 RCC1LQ96I51 464 aaKnown RBP15.27■□□□□ 0.04
CLDND1-203ENST00000394181 METTL1Q9UBP6 276 aaKnown RBP15.27■□□□□ 0.04
CLDND1-203ENST00000394181 DVL1P1P54792 670 aaPredicted RBP15.26■□□□□ 0.03
CLDND1-203ENST00000394181 FGF8P55075 233 aaPredicted RBP15.26■□□□□ 0.03
CLDND1-203ENST00000394181 FFAR4Q5NUL3 377 aa15.26■□□□□ 0.03
CLDND1-203ENST00000394181 MGST2Q99735 147 aa15.26■□□□□ 0.03
CLDND1-203ENST00000394181 EIF5A2Q9GZV4 153 aaKnown RBP15.26■□□□□ 0.03
CLDND1-203ENST00000394181 ABCA2Q9BZC7 2435 aa15.26■□□□□ 0.03
CLDND1-203ENST00000394181 VWC2LB2RUY7 222 aa15.26■□□□□ 0.03
CLDND1-203ENST00000394181 HMGB3O15347 200 aaKnown RBP15.26■□□□□ 0.03
CLDND1-203ENST00000394181 GNB1P62873 340 aa15.26■□□□□ 0.03
CLDND1-203ENST00000394181 DLK1P80370 383 aa15.26■□□□□ 0.03
CLDND1-203ENST00000394181 GCSAMLQ5JQS6 135 aa15.26■□□□□ 0.03
CLDND1-203ENST00000394181 DPPA3Q6W0C5 159 aa15.26■□□□□ 0.03
CLDND1-203ENST00000394181 C19orf35Q6ZS72 473 aa15.26■□□□□ 0.03
CLDND1-203ENST00000394181 PIMREGQ9BSJ6 248 aa15.26■□□□□ 0.03
CLDND1-203ENST00000394181 USP9YO00507 2555 aaPredicted RBP15.26■□□□□ 0.03
CLDND1-203ENST00000394181 SSBP2P81877 361 aaPredicted RBP15.25■□□□□ 0.03
CLDND1-203ENST00000394181 DEFA5Q01523 94 aa15.25■□□□□ 0.03
CLDND1-203ENST00000394181 TNXAQ16473 311 aa15.25■□□□□ 0.03
CLDND1-203ENST00000394181 GUCA2BQ16661 112 aa15.25■□□□□ 0.03
CLDND1-203ENST00000394181 GGACTQ9BVM4 153 aa15.25■□□□□ 0.03
CLDND1-203ENST00000394181 NAV3Q8IVL0 2385 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms