RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 CENPVQ7Z7K6 275 aaPredicted RBP13.94□□□□□ -0.18
THUMPD2-201ENST00000378727 TEX45Q8NA69 505 aa13.94□□□□□ -0.18
THUMPD2-201ENST00000378727 BPIFCQ8NFQ6 507 aa13.94□□□□□ -0.18
THUMPD2-201ENST00000378727 VSIRQ9H7M9 311 aa13.94□□□□□ -0.18
THUMPD2-201ENST00000378727 POLR3KQ9Y2Y1 108 aaPredicted RBP13.94□□□□□ -0.18
THUMPD2-201ENST00000378727 FBN2P35556 2912 aa13.94□□□□□ -0.18
THUMPD2-201ENST00000378727 IGHV4-30-2A0A087WSY4 118 aa13.94□□□□□ -0.18
THUMPD2-201ENST00000378727 AGPAT2O15120 278 aa13.94□□□□□ -0.18
THUMPD2-201ENST00000378727 TOX4O94842 621 aa13.94□□□□□ -0.18
THUMPD2-201ENST00000378727 IFNA4P05014 189 aa13.94□□□□□ -0.18
THUMPD2-201ENST00000378727 FGF7P21781 194 aa13.94□□□□□ -0.18
THUMPD2-201ENST00000378727 RAB11AP62491 216 aa13.94□□□□□ -0.18
THUMPD2-201ENST00000378727 HABP2Q14520 560 aaPredicted RBP13.94□□□□□ -0.18
THUMPD2-201ENST00000378727 BSXQ3C1V8 233 aa13.94□□□□□ -0.18
THUMPD2-201ENST00000378727 LPAR2Q9HBW0 351 aa13.94□□□□□ -0.18
THUMPD2-201ENST00000378727 VENTXO95231 258 aa13.93□□□□□ -0.18
THUMPD2-201ENST00000378727 COL8A1P27658 744 aa13.93□□□□□ -0.18
THUMPD2-201ENST00000378727 CD1BP29016 333 aa13.93□□□□□ -0.18
THUMPD2-201ENST00000378727 DVL1P1P54792 670 aaPredicted RBP13.93□□□□□ -0.18
THUMPD2-201ENST00000378727 DYNAPQ8N1N2 210 aa13.93□□□□□ -0.18
THUMPD2-201ENST00000378727 C17orf50Q8WW18 174 aa13.93□□□□□ -0.18
THUMPD2-201ENST00000378727 SIGLEC9Q9Y336 463 aa13.93□□□□□ -0.18
THUMPD2-201ENST00000378727 TIMM9Q9Y5J7 89 aa13.93□□□□□ -0.18
THUMPD2-201ENST00000378727 VPS13CQ709C8 3753 aa13.93□□□□□ -0.18
THUMPD2-201ENST00000378727 KRBOX1C9JBD0 128 aa13.92□□□□□ -0.18
THUMPD2-201ENST00000378727 TSPAN15O95858 294 aa13.92□□□□□ -0.18
THUMPD2-201ENST00000378727 PAX1P15863 534 aa13.92□□□□□ -0.18
THUMPD2-201ENST00000378727 SERF2P84101 59 aa13.92□□□□□ -0.18
THUMPD2-201ENST00000378727 PRSS8Q16651 343 aa13.92□□□□□ -0.18
THUMPD2-201ENST00000378727 GGACTQ9BVM4 153 aa13.92□□□□□ -0.18
THUMPD2-201ENST00000378727 NPCDR1Q9BY65 106 aa13.92□□□□□ -0.18
THUMPD2-201ENST00000378727 RPRMQ9NS64 109 aa13.92□□□□□ -0.18
THUMPD2-201ENST00000378727 WDR83OSQ9Y284 106 aa13.92□□□□□ -0.18
THUMPD2-201ENST00000378727 INS-IGF2F8WCM5 200 aa13.92□□□□□ -0.18
THUMPD2-201ENST00000378727 DLK1P80370 383 aa13.92□□□□□ -0.18
THUMPD2-201ENST00000378727 TUSC1Q2TAM9 212 aa13.92□□□□□ -0.18
THUMPD2-201ENST00000378727 TMEM231Q9H6L2 316 aa13.92□□□□□ -0.18
THUMPD2-201ENST00000378727 FAM96BQ9Y3D0 163 aa13.92□□□□□ -0.18
THUMPD2-201ENST00000378727 RNASE2P10153 161 aaKnown RBP13.91□□□□□ -0.18
THUMPD2-201ENST00000378727 SNCAP37840 140 aa13.91□□□□□ -0.18
THUMPD2-201ENST00000378727 WT1-ASQ06250 92 aa13.91□□□□□ -0.18
THUMPD2-201ENST00000378727 SSX2Q16385 188 aa13.91□□□□□ -0.18
THUMPD2-201ENST00000378727 FBLN7Q53RD9 439 aa13.91□□□□□ -0.18
THUMPD2-201ENST00000378727 C2orf83Q53S99 150 aa13.91□□□□□ -0.18
THUMPD2-201ENST00000378727 SPSB3Q6PJ21 355 aa13.91□□□□□ -0.18
THUMPD2-201ENST00000378727 DPPA3Q6W0C5 159 aa13.91□□□□□ -0.18
THUMPD2-201ENST00000378727 RNF5Q99942 180 aa13.91□□□□□ -0.18
THUMPD2-201ENST00000378727 A0A1B0GV50 99 aa13.91□□□□□ -0.18
THUMPD2-201ENST00000378727 ARSJQ5FYB0 599 aaPredicted RBP13.91□□□□□ -0.18
THUMPD2-201ENST00000378727 MINOS1Q5TGZ0 78 aa13.91□□□□□ -0.18
THUMPD2-201ENST00000378727 ACSM6Q6P461 480 aa13.91□□□□□ -0.18
THUMPD2-201ENST00000378727 TREML4Q6UXN2 200 aa13.91□□□□□ -0.18
THUMPD2-201ENST00000378727 MMD2Q8IY49 270 aa13.91□□□□□ -0.18
THUMPD2-201ENST00000378727 SCRT1Q9BWW7 348 aa13.91□□□□□ -0.18
THUMPD2-201ENST00000378727 METTL1Q9UBP6 276 aaKnown RBP13.91□□□□□ -0.18
THUMPD2-201ENST00000378727 MINOS1-NBL1R4GNA1 71 aa13.91□□□□□ -0.18
THUMPD2-201ENST00000378727 NAV3Q8IVL0 2385 aa13.9□□□□□ -0.18
THUMPD2-201ENST00000378727 CD24P25063 80 aa13.9□□□□□ -0.18
THUMPD2-201ENST00000378727 ELLP55199 621 aaPredicted RBP13.9□□□□□ -0.18
THUMPD2-201ENST00000378727 CCL20P78556 96 aa13.9□□□□□ -0.18
THUMPD2-201ENST00000378727 ZNF726P1Q15940 193 aa13.9□□□□□ -0.18
THUMPD2-201ENST00000378727 C1orf159Q96HA4 380 aa13.9□□□□□ -0.18
THUMPD2-201ENST00000378727 AJUBAQ96IF1 538 aa13.9□□□□□ -0.18
THUMPD2-201ENST00000378727 FBXL15Q9H469 300 aa13.9□□□□□ -0.18
THUMPD2-201ENST00000378727 USP9YO00507 2555 aaPredicted RBP13.89□□□□□ -0.19
THUMPD2-201ENST00000378727 A0A1W2PN81 502 aa13.89□□□□□ -0.19
THUMPD2-201ENST00000378727 SMCO3A2RU48 225 aa13.89□□□□□ -0.19
THUMPD2-201ENST00000378727 IGKV1D-33P01593 117 aa13.89□□□□□ -0.19
THUMPD2-201ENST00000378727 IGKV1-33P01594 117 aa13.89□□□□□ -0.19
THUMPD2-201ENST00000378727 H2AFB1P0C5Y9 115 aa13.89□□□□□ -0.19
THUMPD2-201ENST00000378727 CHRNA7P36544 502 aa13.89□□□□□ -0.19
THUMPD2-201ENST00000378727 UBE2E1P51965 193 aa13.89□□□□□ -0.19
THUMPD2-201ENST00000378727 ZNF787Q6DD87 383 aa13.89□□□□□ -0.19
THUMPD2-201ENST00000378727 PPP1R27Q86WC6 154 aa13.89□□□□□ -0.19
THUMPD2-201ENST00000378727 NARS2Q96I59 477 aaKnown RBP13.89□□□□□ -0.19
THUMPD2-201ENST00000378727 CD5P06127 495 aa13.89□□□□□ -0.19
THUMPD2-201ENST00000378727 ATP5IP56385 69 aaPredicted RBP13.89□□□□□ -0.19
THUMPD2-201ENST00000378727 LGALS4P56470 323 aa13.89□□□□□ -0.19
THUMPD2-201ENST00000378727 KRTAP10-9P60411 292 aa13.89□□□□□ -0.19
THUMPD2-201ENST00000378727 SSBP2P81877 361 aaPredicted RBP13.89□□□□□ -0.19
THUMPD2-201ENST00000378727 ERHP84090 104 aaKnown RBP13.89□□□□□ -0.19
THUMPD2-201ENST00000378727 PAX8Q06710 450 aa13.89□□□□□ -0.19
THUMPD2-201ENST00000378727 TMEM41BQ5BJD5 291 aa13.89□□□□□ -0.19
THUMPD2-201ENST00000378727 SSX7Q7RTT5 188 aa13.89□□□□□ -0.19
THUMPD2-201ENST00000378727 COMMD1Q8N668 190 aa13.89□□□□□ -0.19
THUMPD2-201ENST00000378727 TMEM218A2RU14 115 aa13.88□□□□□ -0.19
THUMPD2-201ENST00000378727 OOSP1A8MZH6 123 aa13.88□□□□□ -0.19
THUMPD2-201ENST00000378727 FCN1O00602 326 aa13.88□□□□□ -0.19
THUMPD2-201ENST00000378727 RAB2AP61019 212 aa13.88□□□□□ -0.19
THUMPD2-201ENST00000378727 TNXAQ16473 311 aa13.88□□□□□ -0.19
THUMPD2-201ENST00000378727 EAF1Q96JC9 268 aaPredicted RBP13.88□□□□□ -0.19
THUMPD2-201ENST00000378727 TREM1Q9NP99 234 aa13.88□□□□□ -0.19
THUMPD2-201ENST00000378727 LSM4Q9Y4Z0 139 aaKnown RBP13.88□□□□□ -0.19
THUMPD2-201ENST00000378727 CELSR2Q9HCU4 2923 aa13.88□□□□□ -0.19
THUMPD2-201ENST00000378727 IGLC7A0M8Q6 106 aa13.87□□□□□ -0.19
THUMPD2-201ENST00000378727 C9JQL5 133 aa13.87□□□□□ -0.19
THUMPD2-201ENST00000378727 MOSP00540 346 aa13.87□□□□□ -0.19
THUMPD2-201ENST00000378727 COMPP49747 757 aaPredicted RBP13.87□□□□□ -0.19
THUMPD2-201ENST00000378727 CCDC144NLQ6NUI1 221 aa13.87□□□□□ -0.19
THUMPD2-201ENST00000378727 SFT2D1Q8WV19 159 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms