RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 AHRRA9YTQ3 701 aa12.23□□□□□ -0.45
COL9A2-202ENST00000372748 PRSS46E5RG02 174 aa12.23□□□□□ -0.45
COL9A2-202ENST00000372748 ZNF253O75346 499 aa12.23□□□□□ -0.45
COL9A2-202ENST00000372748 Q6ZN92 141 aa12.23□□□□□ -0.45
COL9A2-202ENST00000372748 C1orf174Q8IYL3 243 aa12.23□□□□□ -0.45
COL9A2-202ENST00000372748 MUC6Q6W4X9 2439 aa12.23□□□□□ -0.45
COL9A2-202ENST00000372748 A0A1W2PS18 150 aa12.22□□□□□ -0.45
COL9A2-202ENST00000372748 M0R1X1 148 aa12.22□□□□□ -0.45
COL9A2-202ENST00000372748 AGFG2O95081 481 aa12.22□□□□□ -0.45
COL9A2-202ENST00000372748 CRYABP02511 175 aaKnown RBP12.22□□□□□ -0.45
COL9A2-202ENST00000372748 IGHV1-2P23083 117 aa12.22□□□□□ -0.45
COL9A2-202ENST00000372748 VDAC2P45880 294 aaPredicted RBP12.22□□□□□ -0.45
COL9A2-202ENST00000372748 ZNF83P51522 516 aa12.22□□□□□ -0.45
COL9A2-202ENST00000372748 MAJINQ3KP22 176 aa12.22□□□□□ -0.45
COL9A2-202ENST00000372748 FAM122AQ96E09 287 aa12.22□□□□□ -0.45
COL9A2-202ENST00000372748 GMPPAQ96IJ6 420 aaPredicted RBP12.22□□□□□ -0.45
COL9A2-202ENST00000372748 GNG12Q9UBI6 72 aa12.22□□□□□ -0.45
COL9A2-202ENST00000372748 SVILO95425 2214 aa12.22□□□□□ -0.45
COL9A2-202ENST00000372748 ZNF883P0CG24 379 aa12.22□□□□□ -0.45
COL9A2-202ENST00000372748 NTF3P20783 257 aa12.22□□□□□ -0.45
COL9A2-202ENST00000372748 SRIP30626 198 aa12.22□□□□□ -0.45
COL9A2-202ENST00000372748 CTRLP40313 264 aa12.22□□□□□ -0.45
COL9A2-202ENST00000372748 GNG4P50150 75 aa12.22□□□□□ -0.45
COL9A2-202ENST00000372748 RPP30P78346 268 aaKnown RBP12.22□□□□□ -0.45
COL9A2-202ENST00000372748 MIR17HGQ75NE6 70 aa12.22□□□□□ -0.45
COL9A2-202ENST00000372748 C11orf53Q8IXP5 236 aa12.22□□□□□ -0.45
COL9A2-202ENST00000372748 SFXN3Q9BWM7 321 aa12.22□□□□□ -0.45
COL9A2-202ENST00000372748 CDX4O14627 284 aaPredicted RBP12.21□□□□□ -0.45
COL9A2-202ENST00000372748 HYPMO75409 117 aa12.21□□□□□ -0.45
COL9A2-202ENST00000372748 NDUFB8O95169 186 aa12.21□□□□□ -0.45
COL9A2-202ENST00000372748 RHOBP62745 196 aa12.21□□□□□ -0.45
COL9A2-202ENST00000372748 GNB1LQ9BYB4 327 aa12.21□□□□□ -0.45
COL9A2-202ENST00000372748 HES4Q9HCC6 221 aa12.21□□□□□ -0.45
COL9A2-202ENST00000372748 TET2Q6N021 2002 aaPredicted RBP12.21□□□□□ -0.45
COL9A2-202ENST00000372748 TRAV9-1A0A075B6T8 112 aa12.21□□□□□ -0.45
COL9A2-202ENST00000372748 TRGV10A0A0A0MS01 117 aa12.21□□□□□ -0.45
COL9A2-202ENST00000372748 HELTA6NFD8 242 aa12.21□□□□□ -0.45
COL9A2-202ENST00000372748 CA1P00915 261 aaPredicted RBP12.21□□□□□ -0.45
COL9A2-202ENST00000372748 PSG5Q15238 335 aa12.21□□□□□ -0.45
COL9A2-202ENST00000372748 HES3Q5TGS1 186 aa12.21□□□□□ -0.45
COL9A2-202ENST00000372748 ACP7Q6ZNF0 438 aa12.21□□□□□ -0.45
COL9A2-202ENST00000372748 FER1L6-AS2Q96M78 137 aa12.21□□□□□ -0.45
COL9A2-202ENST00000372748 HINT2Q9BX68 163 aa12.21□□□□□ -0.45
COL9A2-202ENST00000372748 NPVFQ9HCQ7 196 aa12.21□□□□□ -0.45
COL9A2-202ENST00000372748 LSM4Q9Y4Z0 139 aaKnown RBP12.21□□□□□ -0.45
COL9A2-202ENST00000372748 PCNX2A6NKB5 2137 aa12.21□□□□□ -0.46
COL9A2-202ENST00000372748 OR5G3P0C626 314 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 MYOD1P15172 320 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 MRPL49Q13405 166 aaKnown RBP12.2□□□□□ -0.46
COL9A2-202ENST00000372748 TCTEX1D1Q8N7M0 179 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 CNEP1R1Q8N9A8 125 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 KLF14Q8TD94 323 aaPredicted RBP12.2□□□□□ -0.46
COL9A2-202ENST00000372748 FAM216AQ8WUB2 273 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 SPOCK3Q9BQ16 436 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 CHODLQ9H9P2 273 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 SERTAD4Q9NUC0 356 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 SLC45A2Q9UMX9 530 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 C9JCJ5 164 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 SPINT2O43291 252 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 C3orf79P0CE67 100 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 SP9P0CG40 484 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 IGLC2P0DOY2 106 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 IGLC3P0DOY3 106 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 IGFBP2P18065 325 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 HNRNPA3P51991 378 aaKnown RBP12.2□□□□□ -0.46
COL9A2-202ENST00000372748 RELBQ01201 579 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 LCN12Q6JVE5 192 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 TEPPQ6URK8 271 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 TMEM136Q6ZRR5 245 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 KCNS1Q96KK3 526 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 GCM1Q9NP62 436 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 TMEM140Q9NV12 185 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 TCF19Q9Y242 345 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 OTOGLQ3ZCN5 2332 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 ERVK-16P61578 105 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 UTF1Q5T230 341 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 WDR31Q8NA23 367 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 NHLRC2Q8NBF2 726 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 LEAP2Q969E1 77 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 UQCR10Q9UDW1 63 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 LAMTOR2Q9Y2Q5 125 aa12.2□□□□□ -0.46
COL9A2-202ENST00000372748 OR10J4P0C629 311 aa12.19□□□□□ -0.46
COL9A2-202ENST00000372748 MGST1P10620 155 aaKnown RBP12.19□□□□□ -0.46
COL9A2-202ENST00000372748 GATA2P23769 480 aaPredicted RBP12.19□□□□□ -0.46
COL9A2-202ENST00000372748 CX3CL1P78423 397 aa12.19□□□□□ -0.46
COL9A2-202ENST00000372748 WDR82Q6UXN9 313 aa12.19□□□□□ -0.46
COL9A2-202ENST00000372748 MOB3BQ86TA1 216 aa12.19□□□□□ -0.46
COL9A2-202ENST00000372748 C11orf52Q96A22 123 aa12.19□□□□□ -0.46
COL9A2-202ENST00000372748 TRIB1Q96RU8 372 aa12.19□□□□□ -0.46
COL9A2-202ENST00000372748 BMPR1BO00238 502 aa12.19□□□□□ -0.46
COL9A2-202ENST00000372748 MT-CO2P00403 227 aa12.19□□□□□ -0.46
COL9A2-202ENST00000372748 TMPRSS3P57727 454 aa12.19□□□□□ -0.46
COL9A2-202ENST00000372748 DPRXA6NFQ7 191 aa12.18□□□□□ -0.46
COL9A2-202ENST00000372748 IQCF6A8MYZ5 107 aa12.18□□□□□ -0.46
COL9A2-202ENST00000372748 C15orf65H3BRN8 121 aa12.18□□□□□ -0.46
COL9A2-202ENST00000372748 ZNF324O75467 553 aaPredicted RBP12.18□□□□□ -0.46
COL9A2-202ENST00000372748 HINT1P49773 126 aaPredicted RBP12.18□□□□□ -0.46
COL9A2-202ENST00000372748 ZNF134P52741 427 aa12.18□□□□□ -0.46
COL9A2-202ENST00000372748 SRSF6Q13247 344 aaKnown RBP12.18□□□□□ -0.46
COL9A2-202ENST00000372748 PRR31Q5SQ13 230 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms