RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 FAM219AQ8IW50 185 aa10.88□□□□□ -0.67
TPM3-211ENST00000368531 CADM3Q8N126 398 aa10.88□□□□□ -0.67
TPM3-211ENST00000368531 LRTM2Q8N967 370 aa10.88□□□□□ -0.67
TPM3-211ENST00000368531 ZNF431Q8TF32 576 aaPredicted RBP10.88□□□□□ -0.67
TPM3-211ENST00000368531 WIPF2Q8TF74 440 aaPredicted RBP10.88□□□□□ -0.67
TPM3-211ENST00000368531 CITED2Q99967 270 aaPredicted RBP10.88□□□□□ -0.67
TPM3-211ENST00000368531 PDCD10Q9BUL8 212 aa10.88□□□□□ -0.67
TPM3-211ENST00000368531 KLK15Q9H2R5 256 aa10.88□□□□□ -0.67
TPM3-211ENST00000368531 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.88□□□□□ -0.67
TPM3-211ENST00000368531 TMEM14BQ9NUH8 114 aa10.88□□□□□ -0.67
TPM3-211ENST00000368531 COA4Q9NYJ1 87 aa10.88□□□□□ -0.67
TPM3-211ENST00000368531 PTTG1O95997 202 aa10.87□□□□□ -0.67
TPM3-211ENST00000368531 DHFRP00374 187 aa10.87□□□□□ -0.67
TPM3-211ENST00000368531 PRH1P02810 166 aa10.87□□□□□ -0.67
TPM3-211ENST00000368531 IL5P05113 134 aa10.87□□□□□ -0.67
TPM3-211ENST00000368531 RPLP1P05386 114 aaKnown RBP10.87□□□□□ -0.67
TPM3-211ENST00000368531 SULT1A3P0DMM9 295 aa10.87□□□□□ -0.67
TPM3-211ENST00000368531 SULT1A4P0DMN0 295 aa10.87□□□□□ -0.67
TPM3-211ENST00000368531 NMSQ5H8A3 153 aa10.87□□□□□ -0.67
TPM3-211ENST00000368531 CXorf66Q5JRM2 361 aaPredicted RBP10.87□□□□□ -0.67
TPM3-211ENST00000368531 GGNBP1Q5YKI7 109 aa10.87□□□□□ -0.67
TPM3-211ENST00000368531 TMEM65Q6PI78 240 aa10.87□□□□□ -0.67
TPM3-211ENST00000368531 C19orf35Q6ZS72 473 aa10.87□□□□□ -0.67
TPM3-211ENST00000368531 MINDY2Q8NBR6 621 aa10.87□□□□□ -0.67
TPM3-211ENST00000368531 MARVELD1Q9BSK0 173 aa10.87□□□□□ -0.67
TPM3-211ENST00000368531 GPN1Q9HCN4 374 aaPredicted RBP10.87□□□□□ -0.67
TPM3-211ENST00000368531 NDUFA4L2Q9NRX3 87 aa10.87□□□□□ -0.67
TPM3-211ENST00000368531 ZNF580Q9UK33 172 aa10.87□□□□□ -0.67
TPM3-211ENST00000368531 PIGBOS1A0A0B4J2F0 54 aa10.86□□□□□ -0.67
TPM3-211ENST00000368531 DUXBA0A1W2PPF3 345 aa10.86□□□□□ -0.67
TPM3-211ENST00000368531 IGHG4P01861 327 aa10.86□□□□□ -0.67
TPM3-211ENST00000368531 OR13C7P0DN81 318 aa10.86□□□□□ -0.67
TPM3-211ENST00000368531 HSPE1P61604 102 aaKnown RBP10.86□□□□□ -0.67
TPM3-211ENST00000368531 DEFA5Q01523 94 aa10.86□□□□□ -0.67
TPM3-211ENST00000368531 FOXE3Q13461 319 aa10.86□□□□□ -0.67
TPM3-211ENST00000368531 SMCO1Q147U7 214 aa10.86□□□□□ -0.67
TPM3-211ENST00000368531 RGS21Q2M5E4 152 aa10.86□□□□□ -0.67
TPM3-211ENST00000368531 NSUN5P1Q3KNT7 163 aa10.86□□□□□ -0.67
TPM3-211ENST00000368531 THOC7Q6I9Y2 204 aaKnown RBP10.86□□□□□ -0.67
TPM3-211ENST00000368531 SHISA2Q6UWI4 295 aa10.86□□□□□ -0.67
TPM3-211ENST00000368531 C12orf45Q8N5I9 185 aaPredicted RBP10.86□□□□□ -0.67
TPM3-211ENST00000368531 COMMD1Q8N668 190 aa10.86□□□□□ -0.67
TPM3-211ENST00000368531 OR5M8Q8NGP6 311 aa10.86□□□□□ -0.67
TPM3-211ENST00000368531 OR5B3Q8NH48 314 aa10.86□□□□□ -0.67
TPM3-211ENST00000368531 OR1S1Q8NH92 325 aa10.86□□□□□ -0.67
TPM3-211ENST00000368531 MITD1Q8WV92 249 aa10.86□□□□□ -0.67
TPM3-211ENST00000368531 TMEM68Q96MH6 324 aa10.86□□□□□ -0.67
TPM3-211ENST00000368531 CITED1Q99966 193 aa10.86□□□□□ -0.67
TPM3-211ENST00000368531 TMED3Q9Y3Q3 217 aa10.86□□□□□ -0.67
TPM3-211ENST00000368531 IGLC7A0M8Q6 106 aa10.85□□□□□ -0.67
TPM3-211ENST00000368531 MPTX1A8MV57 137 aa10.85□□□□□ -0.67
TPM3-211ENST00000368531 CCSO14618 274 aa10.85□□□□□ -0.67
TPM3-211ENST00000368531 IFNA21P01568 189 aa10.85□□□□□ -0.67
TPM3-211ENST00000368531 IGLV1-40P01703 118 aa10.85□□□□□ -0.67
TPM3-211ENST00000368531 TRGV3P03979 118 aa10.85□□□□□ -0.67
TPM3-211ENST00000368531 ELANEP08246 267 aa10.85□□□□□ -0.67
TPM3-211ENST00000368531 FGF2P09038 288 aa10.85□□□□□ -0.67
TPM3-211ENST00000368531 PSMB6P28072 239 aa10.85□□□□□ -0.67
TPM3-211ENST00000368531 TPPP2P59282 170 aa10.85□□□□□ -0.67
TPM3-211ENST00000368531 CD83Q01151 205 aa10.85□□□□□ -0.67
TPM3-211ENST00000368531 ZNF429Q86V71 674 aa10.85□□□□□ -0.67
TPM3-211ENST00000368531 FAM110DQ8TAY7 271 aaPredicted RBP10.85□□□□□ -0.67
TPM3-211ENST00000368531 PLEKHA3Q9HB20 300 aa10.85□□□□□ -0.67
TPM3-211ENST00000368531 ZNF257Q9Y2Q1 563 aa10.85□□□□□ -0.67
TPM3-211ENST00000368531 A0A1B0GU03 582 aa10.84□□□□□ -0.67
TPM3-211ENST00000368531 C13orf42A0A1B0GVH6 325 aa10.84□□□□□ -0.67
TPM3-211ENST00000368531 CEBPZOSA8MTT3 80 aa10.84□□□□□ -0.67
TPM3-211ENST00000368531 FAM25EA8MYX2 175 aa10.84□□□□□ -0.67
TPM3-211ENST00000368531 PRAF2O60831 178 aa10.84□□□□□ -0.67
TPM3-211ENST00000368531 DEFA4P12838 97 aa10.84□□□□□ -0.67
TPM3-211ENST00000368531 PSMB8P28062 276 aa10.84□□□□□ -0.67
TPM3-211ENST00000368531 HOXA1P49639 335 aaPredicted RBP10.84□□□□□ -0.67
TPM3-211ENST00000368531 RAB9AP51151 201 aa10.84□□□□□ -0.67
TPM3-211ENST00000368531 PRCDQ00LT1 54 aa10.84□□□□□ -0.67
TPM3-211ENST00000368531 WT1-ASQ06250 92 aa10.84□□□□□ -0.67
TPM3-211ENST00000368531 DMRTA1Q5VZB9 504 aa10.84□□□□□ -0.67
TPM3-211ENST00000368531 C18orf65Q6ZTR6 163 aa10.84□□□□□ -0.67
TPM3-211ENST00000368531 TTC9CQ8N5M4 171 aa10.84□□□□□ -0.67
TPM3-211ENST00000368531 OR5B12Q96R08 314 aa10.84□□□□□ -0.67
TPM3-211ENST00000368531 ENY2Q9NPA8 101 aa10.84□□□□□ -0.67
TPM3-211ENST00000368531 ATRQ13535 2644 aa10.84□□□□□ -0.67
TPM3-211ENST00000368531 NPIPB5A8MRT5 1133 aa10.83□□□□□ -0.68
TPM3-211ENST00000368531 NUDT19A8MXV4 375 aa10.83□□□□□ -0.68
TPM3-211ENST00000368531 CTRB1P17538 263 aa10.83□□□□□ -0.68
TPM3-211ENST00000368531 SPCS3P61009 180 aa10.83□□□□□ -0.68
TPM3-211ENST00000368531 CTRB2Q6GPI1 263 aa10.83□□□□□ -0.68
TPM3-211ENST00000368531 SPATA3Q8NHX4 192 aa10.83□□□□□ -0.68
TPM3-211ENST00000368531 GSKIPQ9P0R6 139 aa10.83□□□□□ -0.68
TPM3-211ENST00000368531 TSSC4Q9Y5U2 329 aaPredicted RBP10.83□□□□□ -0.68
TPM3-211ENST00000368531 C5orf51A6NDU8 294 aa10.82□□□□□ -0.68
TPM3-211ENST00000368531 SNRPGP15A8MWD9 76 aa10.82□□□□□ -0.68
TPM3-211ENST00000368531 OR2J3O76001 311 aa10.82□□□□□ -0.68
TPM3-211ENST00000368531 IGHV3-11P01762 117 aa10.82□□□□□ -0.68
TPM3-211ENST00000368531 RPL23AP62750 156 aaKnown RBP10.82□□□□□ -0.68
TPM3-211ENST00000368531 ERHP84090 104 aaKnown RBP10.82□□□□□ -0.68
TPM3-211ENST00000368531 TATDN3Q17R31 274 aa10.82□□□□□ -0.68
TPM3-211ENST00000368531 C2orf68Q2NKX9 166 aa10.82□□□□□ -0.68
TPM3-211ENST00000368531 C11orf87Q6NUJ2 197 aa10.82□□□□□ -0.68
TPM3-211ENST00000368531 SLC25A24Q6NUK1 477 aa10.82□□□□□ -0.68
TPM3-211ENST00000368531 NDUFA11Q86Y39 141 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms