RNA–Protein interactions for RNA: ENST00000361368.6

SMURF1-202, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF1, Length 5,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-202ENST00000361368 APC2O95996 2303 aa17.13■□□□□ 0.33
SMURF1-202ENST00000361368 MRPL20Q9BYC9 149 aaKnown RBP17.13■□□□□ 0.33
SMURF1-202ENST00000361368 CNTFRP26992 372 aa17.13■□□□□ 0.33
SMURF1-202ENST00000361368 TMEM160Q9NX00 188 aa17.13■□□□□ 0.33
SMURF1-202ENST00000361368 EMP1P54849 157 aa17.13■□□□□ 0.33
SMURF1-202ENST00000361368 IMMP1LQ96LU5 166 aa17.13■□□□□ 0.33
SMURF1-202ENST00000361368 CDKN1AP38936 164 aa17.12■□□□□ 0.33
SMURF1-202ENST00000361368 SCGB3A1Q96QR1 104 aa17.12■□□□□ 0.33
SMURF1-202ENST00000361368 SLC50A1Q9BRV3 221 aa17.12■□□□□ 0.33
SMURF1-202ENST00000361368 PEX7O00628 323 aa17.12■□□□□ 0.33
SMURF1-202ENST00000361368 PSG7Q13046 419 aa17.12■□□□□ 0.33
SMURF1-202ENST00000361368 BEX4Q9NWD9 120 aaPredicted RBP17.12■□□□□ 0.33
SMURF1-202ENST00000361368 MARVELD3Q96A59 401 aa17.12■□□□□ 0.33
SMURF1-202ENST00000361368 RNASE4P34096 147 aaKnown RBP17.12■□□□□ 0.33
SMURF1-202ENST00000361368 TTC32Q5I0X7 151 aa17.12■□□□□ 0.33
SMURF1-202ENST00000361368 PUSL1Q8N0Z8 303 aaKnown RBP17.12■□□□□ 0.33
SMURF1-202ENST00000361368 TMEM167AQ8TBQ9 72 aa17.12■□□□□ 0.33
SMURF1-202ENST00000361368 WNT10AQ9GZT5 417 aa17.11■□□□□ 0.33
SMURF1-202ENST00000361368 ATG2BQ96BY7 2078 aa17.11■□□□□ 0.33
SMURF1-202ENST00000361368 OTX1P32242 354 aaPredicted RBP17.11■□□□□ 0.33
SMURF1-202ENST00000361368 BIVMQ86UB2 503 aa17.11■□□□□ 0.33
SMURF1-202ENST00000361368 C9orf106Q8NAJ2 232 aa17.11■□□□□ 0.33
SMURF1-202ENST00000361368 C8orf46Q8TAG6 207 aa17.11■□□□□ 0.33
SMURF1-202ENST00000361368 REPIN1Q9BWE0 567 aaKnown RBP17.11■□□□□ 0.33
SMURF1-202ENST00000361368 MCM3APO60318 1980 aa17.11■□□□□ 0.33
SMURF1-202ENST00000361368 THBDP07204 575 aa17.11■□□□□ 0.33
SMURF1-202ENST00000361368 KIAA1644Q3SXP7 199 aa17.11■□□□□ 0.33
SMURF1-202ENST00000361368 LDLRAD2Q5SZI1 272 aa17.11■□□□□ 0.33
SMURF1-202ENST00000361368 DTX2Q86UW9 622 aa17.11■□□□□ 0.33
SMURF1-202ENST00000361368 A0A1B0GUT8 65 aa17.1■□□□□ 0.33
SMURF1-202ENST00000361368 MALP21145 153 aa17.1■□□□□ 0.33
SMURF1-202ENST00000361368 E9PLN8 166 aa17.1■□□□□ 0.33
SMURF1-202ENST00000361368 FAM201AQ5SY85 155 aa17.1■□□□□ 0.33
SMURF1-202ENST00000361368 VKORC1Q9BQB6 163 aa17.1■□□□□ 0.33
SMURF1-202ENST00000361368 SMIM13P0DJ93 91 aa17.1■□□□□ 0.33
SMURF1-202ENST00000361368 IGFBP2P18065 325 aa17.1■□□□□ 0.33
SMURF1-202ENST00000361368 CMC4P56277 68 aaPredicted RBP17.1■□□□□ 0.33
SMURF1-202ENST00000361368 TBR1Q16650 682 aa17.1■□□□□ 0.33
SMURF1-202ENST00000361368 ZNF506Q5JVG8 444 aa17.1■□□□□ 0.33
SMURF1-202ENST00000361368 MRPL14Q6P1L8 145 aaKnown RBP17.1■□□□□ 0.33
SMURF1-202ENST00000361368 NEUROG1Q92886 237 aa17.1■□□□□ 0.33
SMURF1-202ENST00000361368 S4R3C0 116 aa17.1■□□□□ 0.33
SMURF1-202ENST00000361368 ZNF815PA8K554 130 aa17.1■□□□□ 0.33
SMURF1-202ENST00000361368 FAM131CQ96AQ9 280 aa17.1■□□□□ 0.33
SMURF1-202ENST00000361368 THSD7AQ9UPZ6 1657 aa17.1■□□□□ 0.33
SMURF1-202ENST00000361368 RAMP1O60894 148 aa17.09■□□□□ 0.33
SMURF1-202ENST00000361368 UCP1P25874 307 aa17.09■□□□□ 0.33
SMURF1-202ENST00000361368 TOMM7Q9P0U1 55 aa17.09■□□□□ 0.33
SMURF1-202ENST00000361368 MSGN1A6NI15 193 aa17.09■□□□□ 0.33
SMURF1-202ENST00000361368 C17orf98A8MV24 154 aa17.09■□□□□ 0.33
SMURF1-202ENST00000361368 IGHV3-11P01762 117 aa17.09■□□□□ 0.33
SMURF1-202ENST00000361368 STAG3L3P0CL85 134 aa17.09■□□□□ 0.33
SMURF1-202ENST00000361368 PVRIGQ6DKI7 326 aa17.09■□□□□ 0.33
SMURF1-202ENST00000361368 GTSCR1Q86UQ5 136 aa17.09■□□□□ 0.33
SMURF1-202ENST00000361368 TTC9CQ8N5M4 171 aa17.08■□□□□ 0.33
SMURF1-202ENST00000361368 ASCL2Q99929 193 aa17.08■□□□□ 0.33
SMURF1-202ENST00000361368 AICDAQ9GZX7 198 aa17.08■□□□□ 0.33
SMURF1-202ENST00000361368 FER1L6-AS1Q8NA97 138 aa17.08■□□□□ 0.32
SMURF1-202ENST00000361368 RPP21Q9H633 154 aaKnown RBP17.08■□□□□ 0.32
SMURF1-202ENST00000361368 TCRBV4S1A1TA0A5B7 111 aa17.08■□□□□ 0.32
SMURF1-202ENST00000361368 NUDT11Q96G61 164 aa17.07■□□□□ 0.32
SMURF1-202ENST00000361368 CGAP01215 116 aa17.07■□□□□ 0.32
SMURF1-202ENST00000361368 TMEM105Q8N8V8 129 aa17.07■□□□□ 0.32
SMURF1-202ENST00000361368 TMEM133Q9H2Q1 129 aa17.07■□□□□ 0.32
SMURF1-202ENST00000361368 OTORQ9NRC9 128 aa17.07■□□□□ 0.32
SMURF1-202ENST00000361368 IL36BQ9NZH7 164 aa17.07■□□□□ 0.32
SMURF1-202ENST00000361368 TRAV8-6A0A0B4J262 113 aa17.07■□□□□ 0.32
SMURF1-202ENST00000361368 C1QTNF9BB2RNN3 333 aa17.07■□□□□ 0.32
SMURF1-202ENST00000361368 RCC1LQ96I51 464 aaKnown RBP17.07■□□□□ 0.32
SMURF1-202ENST00000361368 PGPEP1Q9NXJ5 209 aa17.07■□□□□ 0.32
SMURF1-202ENST00000361368 H2BFSP57053 126 aa17.06■□□□□ 0.32
SMURF1-202ENST00000361368 NUP214P35658 2090 aaPredicted RBP17.06■□□□□ 0.32
SMURF1-202ENST00000361368 YPEL1O60688 119 aa17.06■□□□□ 0.32
SMURF1-202ENST00000361368 YPEL2Q96QA6 119 aa17.06■□□□□ 0.32
SMURF1-202ENST00000361368 TRBV7-9A0A0J9YWB2 115 aa17.06■□□□□ 0.32
SMURF1-202ENST00000361368 SLC25A20O43772 301 aa17.06■□□□□ 0.32
SMURF1-202ENST00000361368 TSPAN13O95857 204 aa17.06■□□□□ 0.32
SMURF1-202ENST00000361368 A0A0G2JMM0 328 aa17.06■□□□□ 0.32
SMURF1-202ENST00000361368 A0A1W2PPB8 328 aa17.06■□□□□ 0.32
SMURF1-202ENST00000361368 A0A1W2PRS3 328 aa17.06■□□□□ 0.32
SMURF1-202ENST00000361368 KIR3DP1A8MWS1 328 aa17.06■□□□□ 0.32
SMURF1-202ENST00000361368 SOD3P08294 240 aa17.06■□□□□ 0.32
SMURF1-202ENST00000361368 TMEM42Q69YG0 159 aa17.06■□□□□ 0.32
SMURF1-202ENST00000361368 A0A0G2JK05 382 aa17.05■□□□□ 0.32
SMURF1-202ENST00000361368 CD8AP01732 235 aa17.05■□□□□ 0.32
SMURF1-202ENST00000361368 ARID1AO14497 2285 aa17.05■□□□□ 0.32
SMURF1-202ENST00000361368 CRPP02741 224 aa17.05■□□□□ 0.32
SMURF1-202ENST00000361368 LHX2P50458 406 aa17.05■□□□□ 0.32
SMURF1-202ENST00000361368 Q9H3A6 140 aa17.05■□□□□ 0.32
SMURF1-202ENST00000361368 UPK2O00526 184 aa17.05■□□□□ 0.32
SMURF1-202ENST00000361368 EIF3GO75821 320 aaKnown RBP eCLIP17.05■□□□□ 0.32
SMURF1-202ENST00000361368 APOHP02749 345 aaPredicted RBP17.05■□□□□ 0.32
SMURF1-202ENST00000361368 IFITM3Q01628 133 aa17.05■□□□□ 0.32
SMURF1-202ENST00000361368 ZNF600Q6ZNG1 722 aa17.05■□□□□ 0.32
SMURF1-202ENST00000361368 VGLL1Q99990 258 aa17.05■□□□□ 0.32
SMURF1-202ENST00000361368 FOCADQ5VW36 1801 aa17.05■□□□□ 0.32
SMURF1-202ENST00000361368 IGLV3-12A0A075B6K2 115 aa17.05■□□□□ 0.32
SMURF1-202ENST00000361368 LOC102723996A0A087X1L8 192 aa17.05■□□□□ 0.32
SMURF1-202ENST00000361368 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.05■□□□□ 0.32
SMURF1-202ENST00000361368 PQLC2LA1A4F0 135 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 376.2 ms