RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 RPS10-NUDT3A0A1W2PQS6 291 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 A6NIN4 97 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 H3BN98 237 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 EI24O14681 340 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 MITFO75030 526 aaPredicted RBP4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 APOA2P02652 100 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 EDN2P20800 178 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 NUP62P37198 522 aaPredicted RBP4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 TNP2Q05952 138 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 CLLU1Q5K131 121 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 RAB12Q6IQ22 244 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 PHYHIPQ92561 330 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 LGALS12Q96DT0 336 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 C5orf30Q96GV9 206 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 C18orf15Q96N68 181 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 GPHA2Q96T91 129 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 ISG20L2Q9H9L3 353 aaKnown RBP4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 DAZ1Q9NQZ3 744 aaKnown RBP4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 TRAPPC2LQ9UL33 140 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 OAZ3Q9UMX2 235 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 NBDYA0A0U1RRE5 68 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 A0A1B0GW64 132 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 EFCAB10A6NFE3 127 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 CGB1A6NKQ9 187 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 DHFRP00374 187 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 MRPL3P09001 348 aaKnown RBP4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 PPP1CCP36873 323 aaKnown RBP4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 RFX2P48378 723 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 HLA-DRB3P79483 266 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 GSG1LQ6UXU4 331 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 NKAIN3Q8N8D7 197 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 SETD6Q8TBK2 473 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 ABHD5Q8WTS1 349 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 CACNG8Q8WXS5 425 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 RDH8Q9NYR8 311 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 IGHV4-28A0A0C4DH34 117 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 SRRM4A7MD48 611 aaKnown RBP4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 MRPS14O60783 128 aaKnown RBP4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 RCC1P18754 421 aaPredicted RBP4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 S100PP25815 95 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 BDKRB2P30411 391 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 ARL3P36405 182 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 GABARAPL2P60520 117 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 AARDQ4LEZ3 155 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 RPL22L1Q6P5R6 122 aaKnown RBP4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 ZNF114Q8NC26 417 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 PCNPQ8WW12 178 aaKnown RBP4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 YIPF6Q96EC8 236 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 CENPNQ96H22 339 aaPredicted RBP4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 SDHCQ99643 169 aaPredicted RBP4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 OR51M1Q9H341 326 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 Q9N2K0 584 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 BABAM2Q9NXR7 383 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 SMPXQ9UHP9 88 aa4.24□□□□□ -1.73
CDC42SE2-201ENST00000360515 IGHV3-43A0A0B4J1X8 118 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 MAS1P04201 325 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 IGHV3-43DP0DP04 118 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 HLA-DMAP28067 261 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 HLA-DMBP28068 263 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 TGFBR1P36897 503 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 GPX4P36969 197 aaPredicted RBP4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 RPS11P62280 158 aaKnown RBP eCLIP4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 TMEM187Q14656 261 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 P2RY14Q15391 338 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 C15orf32Q32M92 178 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 C9orf62Q8N4C0 152 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 OR4A4PQ8NGN8 299 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 IL4I1Q96RQ9 567 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 DCSTAMPQ9H295 470 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 BIN3Q9NQY0 253 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 TVP23BQ9NYZ1 205 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 A3GALT2U3KPV4 340 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 TRBV6-7A0A0A0MS04 114 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 PNMA8CA0A1B0GUJ8 204 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 A0A1B0GV90 55 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 INS-IGF2F8WCM5 200 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 H3BNG1 76 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 H7C2Y5 167 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 DNASE2O00115 360 aaPredicted RBP4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 FCGR1AP12314 374 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 ZBTB25P24278 435 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 ZNF93P35789 620 aaPredicted RBP4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 KRTAP10-4P60372 401 aaPredicted RBP4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 SPCS3P61009 180 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 RPP30P78346 268 aaKnown RBP4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 VMA21Q3ZAQ7 101 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 RPL39P5Q59GN2 51 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 Q6ZTC4 211 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 HYLS1Q96M11 299 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 TMEM70Q9BUB7 260 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 CCDC32Q9BV29 185 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 NIT2Q9NQR4 276 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 BET1LQ9NYM9 111 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 ABRACLQ9P1F3 81 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 KCNK7Q9Y2U2 307 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 IGLL5B9A064 214 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 MAGEB4O15481 346 aaPredicted RBP4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 RBFOX2O43251 390 aaKnown RBP eCLIP4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 EIF3GO75821 320 aaKnown RBP eCLIP4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 CST1P01037 141 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms