RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 MFSD4AQ8N468 514 aa11.37□□□□□ -0.59
COPE-202ENST00000349893 GDPD1Q8N9F7 314 aa11.37□□□□□ -0.59
COPE-202ENST00000349893 OR10C1Q96KK4 312 aa11.37□□□□□ -0.59
COPE-202ENST00000349893 AIFM2Q9BRQ8 373 aa11.37□□□□□ -0.59
COPE-202ENST00000349893 MND1Q9BWT6 205 aa11.37□□□□□ -0.59
COPE-202ENST00000349893 S100A14Q9HCY8 104 aa11.37□□□□□ -0.59
COPE-202ENST00000349893 IGHV3OR16-8A0A075B7F1 116 aa11.36□□□□□ -0.59
COPE-202ENST00000349893 ZNF705EA8MWA4 302 aaPredicted RBP11.36□□□□□ -0.59
COPE-202ENST00000349893 J3QRK9 145 aa11.36□□□□□ -0.59
COPE-202ENST00000349893 M0R2N4 97 aa11.36□□□□□ -0.59
COPE-202ENST00000349893 CYB5BO43169 146 aa11.36□□□□□ -0.59
COPE-202ENST00000349893 ZNF207O43670 478 aaKnown RBP11.36□□□□□ -0.59
COPE-202ENST00000349893 NFYAP23511 347 aaPredicted RBP11.36□□□□□ -0.59
COPE-202ENST00000349893 GADD45AP24522 165 aa11.36□□□□□ -0.59
COPE-202ENST00000349893 THOC7Q6I9Y2 204 aaKnown RBP11.36□□□□□ -0.59
COPE-202ENST00000349893 CYGBQ8WWM9 190 aa11.36□□□□□ -0.59
COPE-202ENST00000349893 RHPN1-AS1Q9BWJ2 59 aa11.36□□□□□ -0.59
COPE-202ENST00000349893 C21orf62Q9NYP8 219 aa11.36□□□□□ -0.59
COPE-202ENST00000349893 SPATA2Q9UM82 520 aa11.36□□□□□ -0.59
COPE-202ENST00000349893 ELOA3CA0A087WX78 387 aaPredicted RBP11.35□□□□□ -0.59
COPE-202ENST00000349893 RBFOX2O43251 390 aaKnown RBP eCLIP11.35□□□□□ -0.592e-6■■□□□ 12.4
COPE-202ENST00000349893 ARL6IP5O75915 188 aa11.35□□□□□ -0.59
COPE-202ENST00000349893 DFFBO76075 338 aa11.35□□□□□ -0.59
COPE-202ENST00000349893 SERPINE2P07093 398 aa11.35□□□□□ -0.59
COPE-202ENST00000349893 SPHARQ15513 63 aa11.35□□□□□ -0.59
COPE-202ENST00000349893 TMEM41BQ5BJD5 291 aa11.35□□□□□ -0.59
COPE-202ENST00000349893 HSD17B13Q7Z5P4 300 aaPredicted RBP11.35□□□□□ -0.59
COPE-202ENST00000349893 TMEM116Q8NCL8 245 aa11.35□□□□□ -0.59
COPE-202ENST00000349893 SCARB1Q8WTV0 552 aa11.35□□□□□ -0.59
COPE-202ENST00000349893 QTRT1Q9BXR0 403 aaKnown RBP11.35□□□□□ -0.59
COPE-202ENST00000349893 TAS2R8Q9NYW2 309 aa11.35□□□□□ -0.59
COPE-202ENST00000349893 APOBP04114 4563 aaKnown RBP11.34□□□□□ -0.59
COPE-202ENST00000349893 UPK2O00526 184 aa11.34□□□□□ -0.59
COPE-202ENST00000349893 CTSGP08311 255 aa11.34□□□□□ -0.59
COPE-202ENST00000349893 RAB6AP20340 208 aa11.34□□□□□ -0.59
COPE-202ENST00000349893 TALDO1P37837 337 aa11.34□□□□□ -0.59
COPE-202ENST00000349893 TFPI2P48307 235 aa11.34□□□□□ -0.59
COPE-202ENST00000349893 WT1-ASQ06250 92 aa11.34□□□□□ -0.59
COPE-202ENST00000349893 MSMO1Q15800 293 aa11.34□□□□□ -0.59
COPE-202ENST00000349893 LIPKQ5VXJ0 399 aa11.34□□□□□ -0.59
COPE-202ENST00000349893 OR10W1Q8NGF6 305 aa11.34□□□□□ -0.59
COPE-202ENST00000349893 COMMD5Q9GZQ3 224 aa11.34□□□□□ -0.59
COPE-202ENST00000349893 HRASLSQ9HDD0 168 aa11.34□□□□□ -0.59
COPE-202ENST00000349893 V9GY05 133 aa11.34□□□□□ -0.59
COPE-202ENST00000349893 X6R8D5 127 aa11.34□□□□□ -0.59
COPE-202ENST00000349893 A0A075B6Q4 140 aa11.33□□□□□ -0.6
COPE-202ENST00000349893 TRAV2A0A0B4J234 112 aa11.33□□□□□ -0.6
COPE-202ENST00000349893 TRAV3A0A0B4J244 114 aa11.33□□□□□ -0.6
COPE-202ENST00000349893 K7EIM0 57 aa11.33□□□□□ -0.6
COPE-202ENST00000349893 CD74P04233 296 aa11.33□□□□□ -0.6
COPE-202ENST00000349893 CD5P06127 495 aa11.33□□□□□ -0.6
COPE-202ENST00000349893 TAS2R31P59538 309 aa11.33□□□□□ -0.6
COPE-202ENST00000349893 TMEM203Q969S6 136 aa11.33□□□□□ -0.6
COPE-202ENST00000349893 DGCR14Q96DF8 476 aaKnown RBP11.33□□□□□ -0.6
COPE-202ENST00000349893 NDUFAF3Q9BU61 184 aa11.33□□□□□ -0.6
COPE-202ENST00000349893 DCSTAMPQ9H295 470 aa11.33□□□□□ -0.6
COPE-202ENST00000349893 F11RQ9Y624 299 aaKnown RBP11.33□□□□□ -0.6
COPE-202ENST00000349893 DEFB131BA0A096LNP1 70 aa11.32□□□□□ -0.6
COPE-202ENST00000349893 GNAO1P09471 354 aa11.32□□□□□ -0.6
COPE-202ENST00000349893 RELQ04864 619 aaPredicted RBP11.32□□□□□ -0.6
COPE-202ENST00000349893 ARL6IP1Q15041 203 aa11.32□□□□□ -0.6
COPE-202ENST00000349893 TRAM1Q15629 374 aa11.32□□□□□ -0.6
COPE-202ENST00000349893 C12orf74Q32Q52 190 aa11.32□□□□□ -0.6
COPE-202ENST00000349893 CNIH2Q6PI25 160 aa11.32□□□□□ -0.6
COPE-202ENST00000349893 DHRSXQ8N5I4 330 aa11.32□□□□□ -0.6
COPE-202ENST00000349893 BPIFB6Q8NFQ5 453 aa11.32□□□□□ -0.6
COPE-202ENST00000349893 UFD1Q92890 307 aa11.32□□□□□ -0.6
COPE-202ENST00000349893 CMTM3Q96MX0 182 aa11.32□□□□□ -0.6
COPE-202ENST00000349893 GPHA2Q96T91 129 aa11.32□□□□□ -0.6
COPE-202ENST00000349893 ELF5Q9UKW6 265 aaPredicted RBP11.32□□□□□ -0.6
COPE-202ENST00000349893 OR13C7P0DN81 318 aa11.31□□□□□ -0.6
COPE-202ENST00000349893 PSMA1P25786 263 aaKnown RBP11.31□□□□□ -0.6
COPE-202ENST00000349893 CALRP27797 417 aaKnown RBP11.31□□□□□ -0.6
COPE-202ENST00000349893 RPS25P62851 125 aaKnown RBP11.31□□□□□ -0.6
COPE-202ENST00000349893 PAFAH1B2P68402 229 aa11.31□□□□□ -0.6
COPE-202ENST00000349893 HES5Q5TA89 166 aa11.31□□□□□ -0.6
COPE-202ENST00000349893 SLC25A24Q6NUK1 477 aa11.31□□□□□ -0.6
COPE-202ENST00000349893 ZNF773Q6PK81 442 aa11.31□□□□□ -0.6
COPE-202ENST00000349893 TRPT1Q86TN4 253 aaKnown RBP11.31□□□□□ -0.6
COPE-202ENST00000349893 C8orf59Q8N0T1 100 aaPredicted RBP11.31□□□□□ -0.6
COPE-202ENST00000349893 SPAG16Q8N0X2 631 aa11.31□□□□□ -0.6
COPE-202ENST00000349893 CENPSQ8N2Z9 138 aa11.31□□□□□ -0.6
COPE-202ENST00000349893 GBGT1Q8N5D6 347 aa11.31□□□□□ -0.6
COPE-202ENST00000349893 MAPKAPK5-AS1Q8N8E1 139 aa11.31□□□□□ -0.6
COPE-202ENST00000349893 GIMAP1Q8WWP7 306 aa11.31□□□□□ -0.6
COPE-202ENST00000349893 CELA1Q9UNI1 258 aa11.31□□□□□ -0.6
COPE-202ENST00000349893 AGRNO00468 2067 aa11.31□□□□□ -0.6
COPE-202ENST00000349893 IGKV3-7A0A075B6H7 116 aa11.3□□□□□ -0.6
COPE-202ENST00000349893 IGHV3-49A0A0A0MS15 119 aa11.3□□□□□ -0.6
COPE-202ENST00000349893 TRAV14DV4A0A0A6YYC5 116 aa11.3□□□□□ -0.6
COPE-202ENST00000349893 HPRT1P00492 218 aa11.3□□□□□ -0.6
COPE-202ENST00000349893 TRAPPC2P0DI81 140 aa11.3□□□□□ -0.6
COPE-202ENST00000349893 TRAPPC2BP0DI82 140 aa11.3□□□□□ -0.6
COPE-202ENST00000349893 SPP1P10451 314 aa11.3□□□□□ -0.6
COPE-202ENST00000349893 NQO2P16083 231 aa11.3□□□□□ -0.6
COPE-202ENST00000349893 DEFB131AP59861 70 aa11.3□□□□□ -0.6
COPE-202ENST00000349893 SOHLH1Q5JUK2 328 aa11.3□□□□□ -0.6
COPE-202ENST00000349893 LEMD1Q68G75 181 aa11.3□□□□□ -0.6
COPE-202ENST00000349893 MORN3Q6PF18 240 aaPredicted RBP11.3□□□□□ -0.6
COPE-202ENST00000349893 Q6ZRM9 215 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms