RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 TMEM170AQ8WVE7 144 aa17.21■□□□□ 0.35
TSPAN3-202ENST00000346495 C17orf50Q8WW18 174 aa17.21■□□□□ 0.35
TSPAN3-202ENST00000346495 MBD6Q96DN6 1003 aa17.21■□□□□ 0.35
TSPAN3-202ENST00000346495 EAF1Q96JC9 268 aaPredicted RBP17.21■□□□□ 0.35
TSPAN3-202ENST00000346495 A0A096LNT2 108 aa17.2■□□□□ 0.34
TSPAN3-202ENST00000346495 TRAV20A0A0B4J274 112 aa17.2■□□□□ 0.34
TSPAN3-202ENST00000346495 UMAD1C9J7I0 102 aa17.2■□□□□ 0.34
TSPAN3-202ENST00000346495 SNRNP70P08621 437 aaKnown RBP17.2■□□□□ 0.34
TSPAN3-202ENST00000346495 HES1Q14469 280 aa17.2■□□□□ 0.34
TSPAN3-202ENST00000346495 MMDQ15546 238 aa17.2■□□□□ 0.34
TSPAN3-202ENST00000346495 TMEM182Q6ZP80 229 aaPredicted RBP17.2■□□□□ 0.34
TSPAN3-202ENST00000346495 MRPL41Q8IXM3 137 aaKnown RBP17.2■□□□□ 0.34
TSPAN3-202ENST00000346495 NPBQ8NG41 125 aa17.2■□□□□ 0.34
TSPAN3-202ENST00000346495 FBXL15Q9H469 300 aa17.2■□□□□ 0.34
TSPAN3-202ENST00000346495 KIAA1456Q9P272 454 aa17.2■□□□□ 0.34
TSPAN3-202ENST00000346495 ABCA2Q9BZC7 2435 aa17.19■□□□□ 0.34
TSPAN3-202ENST00000346495 WNK2Q9Y3S1 2297 aa17.19■□□□□ 0.34
TSPAN3-202ENST00000346495 TRIM77I1YAP6 450 aa17.19■□□□□ 0.34
TSPAN3-202ENST00000346495 NBR2O15453 112 aa17.19■□□□□ 0.34
TSPAN3-202ENST00000346495 GATA3P23771 443 aa17.19■□□□□ 0.34
TSPAN3-202ENST00000346495 PAX6P26367 422 aa17.19■□□□□ 0.34
TSPAN3-202ENST00000346495 SNCAP37840 140 aa17.19■□□□□ 0.34
TSPAN3-202ENST00000346495 DLK1P80370 383 aa17.19■□□□□ 0.34
TSPAN3-202ENST00000346495 EBI3Q14213 229 aa17.19■□□□□ 0.34
TSPAN3-202ENST00000346495 PLGLAQ15195 96 aa17.19■□□□□ 0.34
TSPAN3-202ENST00000346495 TNXAQ16473 311 aa17.19■□□□□ 0.34
TSPAN3-202ENST00000346495 BSXQ3C1V8 233 aa17.19■□□□□ 0.34
TSPAN3-202ENST00000346495 OR10W1Q8NGF6 305 aa17.19■□□□□ 0.34
TSPAN3-202ENST00000346495 TAF15Q92804 592 aaKnown RBP eCLIP17.19■□□□□ 0.34
TSPAN3-202ENST00000346495 AJUBAQ96IF1 538 aa17.19■□□□□ 0.34
TSPAN3-202ENST00000346495 PSMG3Q9BT73 122 aaPredicted RBP17.19■□□□□ 0.34
TSPAN3-202ENST00000346495 TNCP24821 2201 aa17.18■□□□□ 0.34
TSPAN3-202ENST00000346495 IGHV1-69DA0A0B4J2H0 117 aa17.18■□□□□ 0.34
TSPAN3-202ENST00000346495 CGB1A6NKQ9 187 aa17.18■□□□□ 0.34
TSPAN3-202ENST00000346495 PRSS46E5RG02 174 aa17.18■□□□□ 0.34
TSPAN3-202ENST00000346495 E7EUB6 86 aa17.18■□□□□ 0.34
TSPAN3-202ENST00000346495 NDUFA3O95167 84 aa17.18■□□□□ 0.34
TSPAN3-202ENST00000346495 IGHV1-69P01742 117 aa17.18■□□□□ 0.34
TSPAN3-202ENST00000346495 RPL27AP46776 148 aaKnown RBP17.18■□□□□ 0.34
TSPAN3-202ENST00000346495 LOXL1Q08397 574 aaPredicted RBP17.18■□□□□ 0.34
TSPAN3-202ENST00000346495 HNF4GQ14541 408 aa17.18■□□□□ 0.34
TSPAN3-202ENST00000346495 C2orf83Q53S99 150 aa17.18■□□□□ 0.34
TSPAN3-202ENST00000346495 C10orf55Q5SWW7 151 aa17.18■□□□□ 0.34
TSPAN3-202ENST00000346495 LINC01356Q8N9X3 169 aa17.18■□□□□ 0.34
TSPAN3-202ENST00000346495 PARP11Q9NR21 331 aa17.18■□□□□ 0.34
TSPAN3-202ENST00000346495 PRH1P02810 166 aa17.18■□□□□ 0.34
TSPAN3-202ENST00000346495 BRS3P32247 399 aa17.18■□□□□ 0.34
TSPAN3-202ENST00000346495 COMPP49747 757 aaPredicted RBP17.18■□□□□ 0.34
TSPAN3-202ENST00000346495 TIMM9Q9Y5J7 89 aa17.18■□□□□ 0.34
TSPAN3-202ENST00000346495 RFNGQ9Y644 331 aa17.18■□□□□ 0.34
TSPAN3-202ENST00000346495 SPG11Q96JI7 2443 aa17.17■□□□□ 0.34
TSPAN3-202ENST00000346495 CRYBG3Q68DQ2 2970 aa17.17■□□□□ 0.34
TSPAN3-202ENST00000346495 RNASE2P10153 161 aaKnown RBP17.17■□□□□ 0.34
TSPAN3-202ENST00000346495 FGF7P21781 194 aa17.17■□□□□ 0.34
TSPAN3-202ENST00000346495 CD24P25063 80 aa17.17■□□□□ 0.34
TSPAN3-202ENST00000346495 CAMLGP49069 296 aa17.17■□□□□ 0.34
TSPAN3-202ENST00000346495 Q5PR19 223 aa17.17■□□□□ 0.34
TSPAN3-202ENST00000346495 AKR1C8PQ5T2L2 129 aa17.17■□□□□ 0.34
TSPAN3-202ENST00000346495 PXDC1Q5TGL8 231 aa17.17■□□□□ 0.34
TSPAN3-202ENST00000346495 Q6ZRG5 221 aa17.17■□□□□ 0.34
TSPAN3-202ENST00000346495 PIP4P2Q8N4L2 257 aa17.17■□□□□ 0.34
TSPAN3-202ENST00000346495 RSG1Q9BU20 258 aa17.17■□□□□ 0.34
TSPAN3-202ENST00000346495 C7orf69Q9H7B7 122 aa17.17■□□□□ 0.34
TSPAN3-202ENST00000346495 HIF1ANQ9NWT6 349 aa17.17■□□□□ 0.34
TSPAN3-202ENST00000346495 USP9YO00507 2555 aaPredicted RBP17.16■□□□□ 0.34
TSPAN3-202ENST00000346495 MED13LQ71F56 2210 aa17.16■□□□□ 0.34
TSPAN3-202ENST00000346495 FAM106CPP0CH98 169 aa17.16■□□□□ 0.34
TSPAN3-202ENST00000346495 PRSS57Q6UWY2 283 aa17.16■□□□□ 0.34
TSPAN3-202ENST00000346495 Q8N6K4 173 aa17.16■□□□□ 0.34
TSPAN3-202ENST00000346495 REG4Q9BYZ8 158 aa17.16■□□□□ 0.34
TSPAN3-202ENST00000346495 FBN2P35556 2912 aa17.16■□□□□ 0.34
TSPAN3-202ENST00000346495 TRAV40A0A0B4J280 105 aa17.15■□□□□ 0.34
TSPAN3-202ENST00000346495 A0A1B0GW64 132 aa17.15■□□□□ 0.34
TSPAN3-202ENST00000346495 MFSD2BA6NFX1 497 aa17.15■□□□□ 0.34
TSPAN3-202ENST00000346495 MDKP21741 143 aaPredicted RBP17.15■□□□□ 0.34
TSPAN3-202ENST00000346495 SUB1P53999 127 aaKnown RBP eCLIP17.15■□□□□ 0.344e-13■■■■■ 56.5
TSPAN3-202ENST00000346495 GNB1P62873 340 aa17.15■□□□□ 0.34
TSPAN3-202ENST00000346495 SERF2P84101 59 aa17.15■□□□□ 0.34
TSPAN3-202ENST00000346495 WT1-ASQ06250 92 aa17.15■□□□□ 0.34
TSPAN3-202ENST00000346495 TUSC1Q2TAM9 212 aa17.15■□□□□ 0.34
TSPAN3-202ENST00000346495 HSD17B13Q7Z5P4 300 aaPredicted RBP17.15■□□□□ 0.34
TSPAN3-202ENST00000346495 CENPVQ7Z7K6 275 aaPredicted RBP17.15■□□□□ 0.34
TSPAN3-202ENST00000346495 WDR83OSQ9Y284 106 aa17.15■□□□□ 0.34
TSPAN3-202ENST00000346495 FBXO7Q9Y3I1 522 aa17.15■□□□□ 0.34
TSPAN3-202ENST00000346495 NUDT19A8MXV4 375 aa17.14■□□□□ 0.33
TSPAN3-202ENST00000346495 FNDC10F2Z333 226 aa17.14■□□□□ 0.33
TSPAN3-202ENST00000346495 TMEM11P17152 192 aa17.14■□□□□ 0.33
TSPAN3-202ENST00000346495 AANATQ16613 207 aa17.14■□□□□ 0.33
TSPAN3-202ENST00000346495 HIST2H2BCQ6DN03 193 aa17.14■□□□□ 0.33
TSPAN3-202ENST00000346495 DPPA3Q6W0C5 159 aa17.14■□□□□ 0.33
TSPAN3-202ENST00000346495 SMCO3A2RU48 225 aa17.14■□□□□ 0.33
TSPAN3-202ENST00000346495 TEX46H3BTG2 121 aa17.14■□□□□ 0.33
TSPAN3-202ENST00000346495 MPDU1O75352 247 aa17.14■□□□□ 0.33
TSPAN3-202ENST00000346495 OR13C7P0DN81 318 aa17.14■□□□□ 0.33
TSPAN3-202ENST00000346495 C5orf64Q2M2E5 130 aa17.14■□□□□ 0.33
TSPAN3-202ENST00000346495 RUSC1-AS1Q66K80 236 aa17.14■□□□□ 0.33
TSPAN3-202ENST00000346495 BTNL8Q6UX41 500 aa17.14■□□□□ 0.33
TSPAN3-202ENST00000346495 EIF4E3Q8N5X7 224 aaKnown RBP17.14■□□□□ 0.33
TSPAN3-202ENST00000346495 FAM213BQ8TBF2 198 aa17.14■□□□□ 0.33
TSPAN3-202ENST00000346495 MARC2Q969Z3 335 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms