RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 SCARB1Q8WTV0 552 aa8.46□□□□□ -1.06
SMIM4-201ENST00000307106 TCTEX1D2Q8WW35 142 aa8.46□□□□□ -1.06
SMIM4-201ENST00000307106 ATP6V0BQ99437 205 aa8.46□□□□□ -1.06
SMIM4-201ENST00000307106 SRSF8Q9BRL6 282 aaKnown RBP8.46□□□□□ -1.06
SMIM4-201ENST00000307106 PLGRKTQ9HBL7 147 aa8.46□□□□□ -1.06
SMIM4-201ENST00000307106 HRASLSQ9HDD0 168 aa8.46□□□□□ -1.06
SMIM4-201ENST00000307106 BET1LQ9NYM9 111 aa8.46□□□□□ -1.06
SMIM4-201ENST00000307106 C21orf62Q9NYP8 219 aa8.46□□□□□ -1.06
SMIM4-201ENST00000307106 SPATA2Q9UM82 520 aa8.46□□□□□ -1.06
SMIM4-201ENST00000307106 KCNK7Q9Y2U2 307 aa8.46□□□□□ -1.06
SMIM4-201ENST00000307106 ERICH4A6NGS2 130 aa8.45□□□□□ -1.06
SMIM4-201ENST00000307106 DNASE2O00115 360 aaPredicted RBP8.45□□□□□ -1.06
SMIM4-201ENST00000307106 NUPL2O15504 423 aaKnown RBP8.45□□□□□ -1.06
SMIM4-201ENST00000307106 YIF1AO95070 293 aa8.45□□□□□ -1.06
SMIM4-201ENST00000307106 IGLV2-14P01704 120 aa8.45□□□□□ -1.06
SMIM4-201ENST00000307106 BRWD1-AS2P59051 145 aa8.45□□□□□ -1.06
SMIM4-201ENST00000307106 TIMM50Q3ZCQ8 353 aa8.45□□□□□ -1.06
SMIM4-201ENST00000307106 Q56UQ5 140 aa8.45□□□□□ -1.06
SMIM4-201ENST00000307106 SPATA12Q7Z6I5 190 aa8.45□□□□□ -1.06
SMIM4-201ENST00000307106 GDPD1Q8N9F7 314 aa8.45□□□□□ -1.06
SMIM4-201ENST00000307106 CSNK1G2-AS1Q8NCQ2 148 aa8.45□□□□□ -1.06
SMIM4-201ENST00000307106 OR10W1Q8NGF6 305 aa8.45□□□□□ -1.06
SMIM4-201ENST00000307106 PYDC1Q8WXC3 89 aa8.45□□□□□ -1.06
SMIM4-201ENST00000307106 ZNF414Q96IQ9 312 aa8.45□□□□□ -1.06
SMIM4-201ENST00000307106 OR10C1Q96KK4 312 aa8.45□□□□□ -1.06
SMIM4-201ENST00000307106 FAM210BQ96KR6 192 aa8.45□□□□□ -1.06
SMIM4-201ENST00000307106 HSD17B10Q99714 261 aaKnown RBP8.45□□□□□ -1.06
SMIM4-201ENST00000307106 MS4A6AQ9H2W1 248 aa8.45□□□□□ -1.06
SMIM4-201ENST00000307106 IGKV1D-8A0A087WSZ0 117 aa8.44□□□□□ -1.06
SMIM4-201ENST00000307106 TRAV14DV4A0A0A6YYC5 116 aa8.44□□□□□ -1.06
SMIM4-201ENST00000307106 EFCAB10A6NFE3 127 aa8.44□□□□□ -1.06
SMIM4-201ENST00000307106 SLC17A2O00624 439 aa8.44□□□□□ -1.06
SMIM4-201ENST00000307106 CD5P06127 495 aa8.44□□□□□ -1.06
SMIM4-201ENST00000307106 RELQ04864 619 aaPredicted RBP8.44□□□□□ -1.06
SMIM4-201ENST00000307106 HSD17B12Q53GQ0 312 aa8.44□□□□□ -1.06
SMIM4-201ENST00000307106 DGCR14Q96DF8 476 aaKnown RBP8.44□□□□□ -1.06
SMIM4-201ENST00000307106 RAB3CQ96E17 227 aa8.44□□□□□ -1.06
SMIM4-201ENST00000307106 CENPOQ9BU64 300 aa8.44□□□□□ -1.06
SMIM4-201ENST00000307106 COMMD5Q9GZQ3 224 aa8.44□□□□□ -1.06
SMIM4-201ENST00000307106 RNF167Q9H6Y7 350 aa8.44□□□□□ -1.06
SMIM4-201ENST00000307106 OR2W1Q9Y3N9 320 aa8.44□□□□□ -1.06
SMIM4-201ENST00000307106 TRAV2A0A0B4J234 112 aa8.43□□□□□ -1.06
SMIM4-201ENST00000307106 TRAV3A0A0B4J244 114 aa8.43□□□□□ -1.06
SMIM4-201ENST00000307106 ST8SIA3O43173 380 aa8.43□□□□□ -1.06
SMIM4-201ENST00000307106 DENRO43583 198 aaKnown RBP8.43□□□□□ -1.06
SMIM4-201ENST00000307106 SLC22A5O76082 557 aa8.43□□□□□ -1.06
SMIM4-201ENST00000307106 HLA-DQB1P01920 261 aa8.43□□□□□ -1.06
SMIM4-201ENST00000307106 EIF4EP06730 217 aaKnown RBP8.43□□□□□ -1.06
SMIM4-201ENST00000307106 SERPINE2P07093 398 aa8.43□□□□□ -1.06
SMIM4-201ENST00000307106 CTSGP08311 255 aa8.43□□□□□ -1.06
SMIM4-201ENST00000307106 OR13C7P0DN81 318 aa8.43□□□□□ -1.06
SMIM4-201ENST00000307106 WNT4P56705 351 aa8.43□□□□□ -1.06
SMIM4-201ENST00000307106 RPL11P62913 178 aaKnown RBP8.43□□□□□ -1.06
SMIM4-201ENST00000307106 ST3GAL4Q11206 333 aa8.43□□□□□ -1.06
SMIM4-201ENST00000307106 EIF4EBP1Q13541 118 aaPredicted RBP8.43□□□□□ -1.06
SMIM4-201ENST00000307106 C6orf223Q8N319 242 aa8.43□□□□□ -1.06
SMIM4-201ENST00000307106 MFSD4AQ8N468 514 aa8.43□□□□□ -1.06
SMIM4-201ENST00000307106 MS4A15Q8N5U1 240 aa8.43□□□□□ -1.06
SMIM4-201ENST00000307106 QTRT1Q9BXR0 403 aaKnown RBP8.43□□□□□ -1.06
SMIM4-201ENST00000307106 TAS2R8Q9NYW2 309 aa8.43□□□□□ -1.06
SMIM4-201ENST00000307106 A0A075B6Q4 140 aa8.42□□□□□ -1.06
SMIM4-201ENST00000307106 IGKV1D-13A0A0B4J2D9 117 aa8.42□□□□□ -1.06
SMIM4-201ENST00000307106 K7EIM0 57 aa8.42□□□□□ -1.06
SMIM4-201ENST00000307106 MYL12BO14950 172 aa8.42□□□□□ -1.06
SMIM4-201ENST00000307106 IGKV1-13P0DP09 117 aa8.42□□□□□ -1.06
SMIM4-201ENST00000307106 GNB3P16520 340 aa8.42□□□□□ -1.06
SMIM4-201ENST00000307106 NFYAP23511 347 aaPredicted RBP8.42□□□□□ -1.06
SMIM4-201ENST00000307106 CLDN12P56749 244 aa8.42□□□□□ -1.06
SMIM4-201ENST00000307106 WT1-ASQ06250 92 aa8.42□□□□□ -1.06
SMIM4-201ENST00000307106 RAB11BQ15907 218 aa8.42□□□□□ -1.06
SMIM4-201ENST00000307106 THOC7Q6I9Y2 204 aaKnown RBP8.42□□□□□ -1.06
SMIM4-201ENST00000307106 Q6ZS49 121 aa8.42□□□□□ -1.06
SMIM4-201ENST00000307106 ST8SIA2Q92186 375 aa8.42□□□□□ -1.06
SMIM4-201ENST00000307106 GPHA2Q96T91 129 aa8.42□□□□□ -1.06
SMIM4-201ENST00000307106 GFI1Q99684 422 aa8.42□□□□□ -1.06
SMIM4-201ENST00000307106 AIFM2Q9BRQ8 373 aa8.42□□□□□ -1.06
SMIM4-201ENST00000307106 RABAC1Q9UI14 185 aa8.42□□□□□ -1.06
SMIM4-201ENST00000307106 F11RQ9Y624 299 aaKnown RBP8.42□□□□□ -1.06
SMIM4-201ENST00000307106 KNCNA6PVL3 124 aa8.41□□□□□ -1.06
SMIM4-201ENST00000307106 UPK2O00526 184 aa8.41□□□□□ -1.06
SMIM4-201ENST00000307106 MFNGO00587 321 aa8.41□□□□□ -1.06
SMIM4-201ENST00000307106 SPART-AS1P0CW21 52 aa8.41□□□□□ -1.06
SMIM4-201ENST00000307106 TALDO1P37837 337 aa8.41□□□□□ -1.06
SMIM4-201ENST00000307106 C2orf76Q3KRA6 126 aa8.41□□□□□ -1.06
SMIM4-201ENST00000307106 UBE2UQ5VVX9 321 aa8.41□□□□□ -1.06
SMIM4-201ENST00000307106 ZNF66Q6ZN08 573 aa8.41□□□□□ -1.06
SMIM4-201ENST00000307106 HSD17B13Q7Z5P4 300 aaPredicted RBP8.41□□□□□ -1.06
SMIM4-201ENST00000307106 LILRB2Q8N423 598 aa8.41□□□□□ -1.06
SMIM4-201ENST00000307106 DUSP18Q8NEJ0 188 aa8.41□□□□□ -1.06
SMIM4-201ENST00000307106 ZNF555Q8NEP9 628 aa8.41□□□□□ -1.06
SMIM4-201ENST00000307106 C9orf16Q9BUW7 83 aa8.41□□□□□ -1.06
SMIM4-201ENST00000307106 VSIRQ9H7M9 311 aa8.41□□□□□ -1.06
SMIM4-201ENST00000307106 AK6Q9Y3D8 172 aaKnown RBP8.41□□□□□ -1.06
SMIM4-201ENST00000307106 TMED3Q9Y3Q3 217 aa8.41□□□□□ -1.06
SMIM4-201ENST00000307106 MYCBP2O75592 4640 aa8.4□□□□□ -1.06
SMIM4-201ENST00000307106 FLG2Q5D862 2391 aaPredicted RBP8.4□□□□□ -1.06
SMIM4-201ENST00000307106 IGHV3-66A0A0C4DH42 116 aa8.4□□□□□ -1.06
SMIM4-201ENST00000307106 NBDYA0A0U1RRE5 68 aa8.4□□□□□ -1.06
SMIM4-201ENST00000307106 ATP8B1O43520 1251 aa8.4□□□□□ -1.06
SMIM4-201ENST00000307106 APOHP02749 345 aaPredicted RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms